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Functional multi-organelle units control inflammatory lipid metabolism of macrophages Zimmermann, Julia A.; Lucht, Kerstin; Stecher, Manuel; Badhan, Chahat; Glaser, Katharina M.; Epple, Maximilian W.; Koch, Lena R.; Deboutte, Ward; Manke, Thomas; Ebnet, Klaus; Brinkmann, Frauke; Fehler, Olesja; Vogl, Thomas; Schuster, Ev-Marie; Bremser, Anna; Buescher, Joerg M.; Rambold, Angelika S. Share Save
Multimodal epigenetic changes and altered NEUROD1 chromatin binding in the mouse hippocampus underlie FOXG1 syndrome Akol, Ipek; Izzo, Annalisa; Gather, Fabian; Strack, Stefanie; Heidrich, Stefanie; Hailin, Darren O.; Villarreal, Alejandro; Hacker, Christine; Rauleac, Tudor; Bella, Chiara; Fischer, Andre; Manke, Thomas; Vogel, Tanja Share Save
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Hyaluronic acid-GPRC5C signalling promotes dormancy in haematopoietic stem cells Zhang, Yu Wei; Mess, Julian; Aizarani, Nadim; Mishra, Pankaj; Johnson, Carys; Romero-Mulero, Mari Carmen; Rettkowski, Jasmin; Schoenberger, Katharina; Obier, Nadine; Jaecklein, Karin; Woessner, Nadine M.; Lalioti, Maria-Eleni; Velasco-Hernandez, Talia; Sikora, Katarzyna; Waesch, Ralph; Lehnertz, Bernhard; Sauvageau, Guy; Manke, Thomas; Menendez, Pablo; Walter, Sebastian Gottfried; Minguet, Susana; Laurenti, Elisa; Guenther, Stefan; Gruen, Dominic; Cabezas-Wallscheid, Nina Share Save
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CRUP: a comprehensive framework to predict condition-specific regulatory units Ramisch, Anna; Heinrich, Verena; Glaser, Laura V.; Fuchs, Alisa; Yang, Xinyi; Benner, Philipp; Schoepflin, Robert; Li, Na; Kinkley, Sarah; Roemer-Hillmann, Anja; Longinotto, John; Heyne, Steffen; Czepukojc, Beate; Kessler, Sonja M.; Kiemer, Alexandra K.; Cadenas, Cristina; Arrigoni, Laura; Gasparoni, Nina; Manke, Thomas; Pap, Thomas; Pospisilik, John A.; Hengstler, Jan; Walter, Joern; Meijsing, Sebastiaan H.; Chung, Ho-Ryun; Vingron, Martin Share Save
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RELACS nuclei barcoding enables high-throughput ChIP-seq Arrigoni, Laura; Al-Hasani, Hoor; Ramirez, Fidel; Panzeri, Ilaria; Ryan, Devon Patrick; Santacruz, Diana; Kress, Nadia; Pospisilik, John Andrew; Boenisch, Ulrike; Manke, Thomas Share Save
Integrative analysis of single-cell expression data reveals distinct regulatory states in bidirectional promoters Ardakani, Fatemeh Behjati; Kattler, Kathrin; Nordstroem, Karl; Gasparoni, Nina; Gasparoni, Gilles; Fuchs, Sarah; Sinha, Anupam; Barann, Matthias; Ebert, Peter; Fischer, Jonas; Hutter, Barbara; Zipprich, Gideon; Imbusch, Charles D.; Felder, Baerbel; Eils, Juergen; Brors, Benedikt; Lengauer, Thomas; Manke, Thomas; Rosenstiel, Philip; Walter, Joern; Schulz, Marcel H. Share Save
DOT1L promotes progenitor proliferation and primes neuronal layer identity in the developing cerebral cortex Franz, Henriette; Villarreal, Alejandro; Heidrich, Stefanie; Videm, Pavankumar; Kilpert, Fabian; Mestres, Ivan; Calegari, Federico; Backofen, Rolf; Manke, Thomas; Vogel, Tanja Share Save
A comprehensive analysis of 195 DNA methylomes reveals shared and cell-specific features of partially methylated domains Salhab, Abdulrahman; Nordstroem, Karl; Gasparoni, Gilles; Kattler, Kathrin; Ebert, Peter; Ramirez, Fidel; Arrigoni, Laura; Mueller, Fabian; Polansky, Julia K.; Cadenas, Cristina; Hengstler, Jan G.; Lengauer, Thomas; Manke, Thomas; Walter, Joern Share Save
Galaxy HiCExplorer: a web server for reproducible Hi-C data analysis, quality control and visualization Wolff, Joachim; Bhardwaj, Vivek; Nothjunge, Stephan; Richard, Gautier; Renschler, Gina; Gilsbach, Raif; Manke, Thomas; Backofen, Roif; Ramirez, Fidel; Gruening, Bjorn A. Share Save
Community-Driven Data Analysis Training for Biology Batut, Berenice; Hiltemann, Saskia; Bagnacani, Andrea; Baker, Dannon; Bhardwaj, Vivek; Blank, Clemens; Bretaudeau, Anthony; Brillet-Gueguen, Loraine; Cech, Martin; Chilton, John; Clements, Dave; Doppelt-Azeroual, Olivia; Erxleben, Anika; Freeberg, Mallory Ann; Gladman, Simon; Hoogstrate, Youri; Hotz, Hans-Rudolf; Houwaart, Torsten; Jagtap, Pratik; Lariviere, Delphine; Le Corguille, Gildas; Manke, Thomas; Mareuil, Fabien; Ramirez, Fidel; Ryan, Devon; Sigloch, Florian Christoph; Soranzo, Nicola; Wolff, Joachim; Videm, Pavankumar; Wolfien, Markus; Wubuli, Aisanjiang; Yusuf, Dilmurat; Taylor, James; Backofen, Rolf; Nekrutenko, Anton; Gruening, Bjoern Share Save
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