arrow
Back
S

Sofia Lemak

university of toronto

10H-index
36Paper Count
412Citation Count
Published Papers 14
Publication Date
Structural and Biochemical Insights into Lignin-Oxidizing Activity of Bacterial Peroxidases against Soluble Substrates and Kraft Lignin
err2025-03-01
err0
PREAI
errChoolaei, Zahra; Khusnutdinova, Anna N.; Skarina, Tatiana; Stogios, Peter; Diep, Patrick; Lemak, Sofia; Edwards, Elizabeth A.; Savchenko, Alexei; Yakunin, Alexander F.
errShare
errSave
Torsional twist of the SARS-CoV and SARS-CoV-2 SUD-N and SUD-M domains
err2025-02-19
err0
errOAAI
errRosas-Lemus, Monica; Minasov, George; Brunzelle, Joseph S.; Taha, Taha Y.; Lemak, Sofia; Yin, Shaohui; Shuvalova, Ludmilla; Rosecrans, Julia; Khanna, Kanika; Seifert, H. Steven; Savchenko, Alexei; Stogios, Peter J.; Ott, Melanie; Satchell, Karla J. F.
errShare
errSave
Polyesterase activity is widespread in the family IV carboxylesterases from bacteria
err2025-01-01
err0
errOAAI
errMa, Hairong; Khusnutdinova, Anna N.; Lemak, Sofia; Chernikova, Tatyana N.; Golyshina, Olga V.; Almendral, David; Ferrer, Manuel; Golyshin, Peter N.; Yakunin, Alexander F.
errShare
errSave
Biochemical plasticity of the Escherichia coli CRISPR Cascade revealed by in vitro reconstitution of Cascade activities from purified Cas proteins
err2024-10-07
err1
PREAI
errLemak, Sofia; Brown, Greg; Makarova, Kira S.; Koonin, Eugene V.; Yakunin, Alexander F.
errShare
errSave
CRISPR-induced DNA reorganization for multiplexed nucleic acid detection
err2023-03-17
err27
errOAAI
errKarlikow, Margot; Amalfitano, Evan; Yang, Xiaolong; Doucet, Jennifer; Chapman, Abigail; Mousavi, Peivand Sadat; Homme, Paige; Sutyrina, Polina; Chan, Winston; Lemak, Sofia; Yakunin, Alexander F.; Dolezal, Adam G.; Kelley, Shana; Foster, Leonard J.; Harpur, Brock A.; Pardee, Keith
errShare
errSave
Thermophilic Carboxylesterases from Hydrothermal Vents of the Volcanic Island of Ischia Active on Synthetic and Biobased Polymers and Mycotoxins
err2023-02-28
err13
errOAAI
errDistaso, Marco A.; Chernikova, Tatyana N.; Bargiela, Rafael; Coscolin, Cristina; Stogios, Peter; Gonzalez-Alfonso, Jose L.; Lemak, Sofia; Khusnutdinova, Anna N.; Plou, Francisco J.; Evdokimova, Elena; Savchenko, Alexei; Lunev, Evgenii A.; Yakimov, Michail M.; Golyshina, Olga V.; Ferrer, Manuel; Yakunin, Alexander F.; Golyshin, Peter N.
errShare
errSave
Structural and biochemical insights into CRISPR RNA processing by the Cas5c ribonuclease SMU1763 from Streptococcus mutans
err2021-11-01
err2
errOAAI
errLemak, Sofia; Serbanescu, M. Anca; Khusnutdinova, Anna N.; Ruszkowski, Milosz; Beloglazova, Natalia; Xu, Xiaohui; Brown, Greg; Cui, Hong; Tan, Kemin; Joachimiak, Andrzej; Cvitkovitch, Dennis G.; Savchenko, Alexei; Yakunin, Alexander F.
errShare
errSave
Extrachromosomal circular elements targeted by CRISPR-Cas in Dehalococcoides mccartyi are linked to mobilization of reductive dehalogenase genes
err2018-08-13
err17
errOAAI
errMolenda, Olivia; Tang, Shuiquan; Lomheim, Line; Gautam, Vasu K.; Lemak, Sofia; Yakunin, Alexander F.; Maxwell, Karen L.; Edwards, Elizabeth A.
errShare
errSave
Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT
err2017-06-16
err19
errOAAI
errGolyshina, Olga V.; Tran, Hai; Reva, Oleg N.; Lemak, Sofia; Yakunin, Alexander F.; Goesmann, Alexander; Nechitaylo, Taras Y.; LaCono, Violetta; Smedile, Francesco; Slesarev, Alexei; Rojo, David; Barbas, Coral; Ferrer, Manuel; Yakimov, Michail M.; Golyshin, Peter N.
errShare
errSave
Altered stoichiometry Escherichia coli Cascade complexes with shortened CRISPR RNA spacers are capable of interference and primed adaptation
err2016-10-13
err50
errOAAI
errKuznedelov, Konstantin; Mekler, Vladimir; Lemak, Sofia; Tokmina-Lukaszewska, Monika; Datsenko, Kirill A.; Jain, Ishita; Savitskaya, Ekaterina; Mallon, John; Shmakov, Sergey; Bothner, Brian; Bailey, Scott; Yakunin, Alexander F.; Severinov, Konstantin; Semenova, Ekaterina
errShare
errSave
Conditional Epistatic Interaction Maps Reveal Global Functional Rewiring of Genome Integrity Pathways in Escherichia coli
err2016-01-01
err38
errOAAI
errKumar, Ashwani; Beloglazova, Natalia; Bundalovic-Torma, Cedoljub; Phanse, Sadhna; Deineko, Viktor; Gagarinova, Alla; Musso, Gabriel; Vlasblom, James; Lemak, Sofia; Hooshyar, Mohsen; Minic, Zoran; Wagih, Omar; Mosca, Roberto; Aloy, Patrick; Golshani, Ashkan; Parkinson, John; Emili, Andrew; Yakunin, Alexander F.; Babu, Mohan
errShare
errSave
CRISPR RNA binding and DNA target recognition by purified Cascade complexes from Escherichia coli
err2014-12-08
err35
errOAAI
errBeloglazova, Natalia; Kuznedelov, Konstantin; Flick, Robert; Datsenko, Kirill A.; Brown, Greg; Popovic, Ana; Lemak, Sofia; Semenova, Ekaterina; Severinov, Konstantin; Yakunin, Alexander F.
errShare
errSave
Toroidal Structure and DNA Cleavage by the CRISPR-Associated [4Fe-4S] Cluster Containing Cas4 Nuclease SSO0001 from Sulfolobus solfataricus
err2013-11-11
err55
errOAAI
errLemak, Sofia; Beloglazova, Natalia; Nocek, Boguslaw; Skarina, Tatiana; Flick, Robert; Brown, Greg; Popovic, Ana; Joachimiak, Andrzej; Savchenko, Alexei; Yakunin, Alexander F.
errShare
errSave
Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica
err2012-06-27
err35
errOAAI
errLemak, Sofia; Tchigvintsev, Anatoli; Petit, Pierre; Flick, Robert; Singer, Alexander U.; Brown, Greg; Evdokimova, Elena; Egorova, Olga; Gonzalez, Claudio F.; Chernikova, Tatyana N.; Yakimov, Michail M.; Kube, Michael; Reinhardt, Richard; Golyshin, Peter N.; Savchenko, Alexei; Yakunin, Alexander F.
errShare
errSave