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A. Joachimiak

university of cincinnati

83H-index
1.7KPaper Count
3.0WCitation Count
Published Papers 191
Publication Date
Structural basis for substrate-assisted catalysis and small-molecule inhibition of alphavirus macrodomains
err2026-09-17
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errOAAI
errYoungchang Kim; Nazar Gora; Changsoo Chang; Lucy Stols; Michael Endres; Zamal Ahmed; Darin E. Jones; Todd M. Link; Cody J. Cris; Subhash C. Verma; Gyorgy Babnigg; Karolina Michalska; John A. Tainer; Greg L. Hura; Andrzej Joachimiak
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The Advantages of AI for Computational Protein Studies and Looking Ahead at the Next Challenges: Single Structures Are Not Enough
err2026-07-01
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PREAI
errPradeep, B K; Chen, Shi-Jie; Dima, Ruxandra; Hassan, Mubasher; Joachimiak, Andrzej; Kihara, Daisuke; Kloczkowski, Andrzej; Law, Jeffrey; Liwo, Adam; Meller, Jarek; Micheletti, Cristan; Minor, Wladek; Montelione, Gaetano T; Rackovsky, Shalom; Scaramozzino, Domenico; Senda, Miki; Senda, Toshiya; Skolnick, Jeffrey; Stan, George; Vakser, Ilya A.; Wang, Jin; Zou, Xiaoqin; Jernigan, Robert L.
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A funnel approach to enable analyses of epitope-specific human CD4 T cells specific for influenza and SARS-CoV-2
errmBio
IF4.7
err2026-06-10
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PREAI
errRichards, K. A.; Mettelman, R. C.; Trombly, K.; Eismann, M.; Allen, E. K.; Scott, Z. B.; Joachimiak, A.; Schultz-Cherry, S.; Chaves, F. A.; Thomas, P. G.; Sant, A. J.
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Correction to “A Structurally Diverse Compound Screening Library to Identify Substrates for Diamine; Polyamine; and Related Acetyltransferases”
err2025-07-08
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PREAI
errHazel N. Leiva Martel; Pamela L. Caro De Silva; Ron Painter; Van Thi Bich Le; Patricia Uychoco; Daniel Figueroa Paniagua; Michael Endres; Natalia Maltseva; Andrzej Joachimiak; Misty L. Kuhn
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Different chemical scaffolds bind to L-phe site in Mycobacterium tuberculosis Phe-tRNA synthetase
err2025-04-01
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PREAI
errGade, Priyanka; Chang, Changsoo; Pryde, Denise S.; Fletcher, Daniel; Niven, Sarah; Magalhaes, Luma Godoy; Robinson, David; Saini, Jagmohan; Ibrahim, Peter E. G. F.; Forte, Barbara; Wower, Jacek; Bodkin, Michael J.; Baragana, Beatriz; Gilbert, Ian H.; Michalska, Karolina; Joachimiak, Andrzej
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Mapping Hsp104 interactions using cross-linking mass spectrometry
err2025-02-24
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errOAAI
errMichalska, Karolina; Joachimiak, Andrzej; Joachimiak, Lukasz A.
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Role of the Mobile Active Site Flap in IMP Dehydrogenase Inhibitor Binding
err2025-01-29
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PREAI
errWang, Xingyou; Rosenberg, Masha M.; Kim, Youngchang; Maltseva, Natalia; Cuny, Gregory D.; Joachimiak, Andrzej; Kuzmic, Petr; Hedstrom, Lizbeth
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A Structurally Diverse Compound Screening Library to Identify Substrates for Diamine, Polyamine, and Related Acetyltransferases
err2024-12-02
err1
errOAAI
errLeiva, Hazel; De Silva, Pamela L. Caro; Painter, Ron; Le, Van Thi Bich; Uychoco, Patricia; Paniagua, Daniel Figueroa; Endres, Michael; Maltseva, Natalia; Joachimiak, Andrzej; Kuhn, Misty L.
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Nα -acetyl-L-ornithine deacetylase from Escherichia coli and a ninhydrin-based assay to enable inhibitor identification (vol 12, 1415644, 2024)
err2024-08-07
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errOAAI
errKelley, Emma H.; Osipiuk, Jerzy; Korbas, Malgorzata; Endres, Michael; Bland, Alayna; Ehrman, Victoria; Joachimiak, Andrzej; Olsen, Kenneth W.; Becker, Daniel P.
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Revealing reaction intermediates in one-carbon elongation by thiamine diphosphate/CoA-dependent enzyme family
err2024-07-21
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errOAAI
errKim, Youngchang; Lee, Seung Hwan; Gade, Priyanka; Nattermann, Maren; Maltseva, Natalia; Endres, Michael; Chen, Jing; Wichmann, Philipp; Hu, Yang; Marchal, Daniel G.; Yoshikuni, Yasuo; Erb, Tobias J.; Gonzalez, Ramon; Michalska, Karolina; Joachimiak, Andrzej
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Nα-acetyl-L-ornithine deacetylase from Escherichia coli and a ninhydrin-based assay to enable inhibitor identification
err2024-07-11
err1
errOAAI
errKelley, Emma H.; Osipiuk, Jerzy; Korbas, Malgorzata; Endres, Michael; Bland, Alayna; Ehrman, Victoria; Joachimiak, Andrzej; Olsen, Kenneth W.; Becker, Daniel P.
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Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge
err2024-06-25
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errOAAI
errLawson, Catherine L.; Kryshtafovych, Andriy; Pintilie, Grigore D.; Burley, Stephen K.; Cerny, Jiri; Chen, Vincent B.; Emsley, Paul; Gobbi, Alberto; Joachimiak, Andrzej; Noreng, Sigrid; Prisant, Michael G.; Read, Randy J.; Richardson, Jane S.; Rohou, Alexis L.; Schneider, Bohdan; Sellers, Benjamin D.; Shao, Chenghua; Sourial, Elizabeth; Williams, Chris I.; Williams, Christopher J.; Yang, Ying; Abbaraju, Venkat; Afonine, Pavel V.; Baker, Matthew L.; Bond, Paul S.; Blundell, Tom L.; Burnley, Tom; Campbell, Arthur; Cao, Renzhi; Cheng, Jianlin; Chojnowski, Grzegorz; Cowtan, K. D.; DiMaio, Frank; Esmaeeli, Reza; Giri, Nabin; Grubmueller, Helmut; Hoh, Soon Wen; Hou, Jie; Hryc, Corey F.; Hunte, Carola; Igaev, Maxim; Joseph, Agnel P.; Kao, Wei-Chun; Kihara, Daisuke; Kumar, Dilip; Lang, Lijun; Lin, Sean; Subramaniya, Sai R. Maddhuri Venkata; Mittal, Sumit; Mondal, Arup; Moriarty, Nigel W.; Muenks, Andrew; Murshudov, Garib N.; Nicholls, Robert A.; Olek, Mateusz; Palmer, Colin M.; Perez, Alberto; Pohjolainen, Emmi; Pothula, Karunakar R.; Rowley, Christopher N.; Sarkar, Daipayan; Schaefer, Luisa U.; Schlicksup, Christopher J.; Schroeder, Gunnar F.; Shekhar, Mrinal; Si, Dong; Singharoy, Abhishek; Sobolev, Oleg V.; Terashi, Genki; Vaiana, Andrea C.; Vedithi, Sundeep C.; Verburgt, Jacob; Wang, Xiao; Warshamanage, Rangana; Winn, Martyn D.; Weyand, Simone; Yamashita, Keitaro; Zhao, Minglei; Schmid, Michael F.; Berman, Helen M.; Chiu, Wah
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Molecular basis for dual functions in pilus assembly modulated by the lid of a pilus-specific sortase
err2024-06-01
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errOAAI
errChang, Chungyu; Ton-That, Hylam; Osipiuk, Jerzy; Joachimiak, Andrzej; Das, Asis; Ton-That, Hung
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Native Mass Spectrometry Dissects the Structural Dynamics of an Allosteric Heterodimer of SARS-CoV-2 Nonstructural Proteins
err2024-03-27
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errOAAI
errThibert, Stephanie M.; Reid, Deseree J.; Wilson, Jesse W.; Varikoti, Rohith; Maltseva, Natalia; Schultz, Katherine J.; Kruel, Agustin; Babnigg, Gyorgy; Joachimiak, Andrzej; Kumar, Neeraj; Zhou, Mowei
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Structure-based design of SARS-CoV-2 papain-like protease inhibitors
err2024-01-01
err10
errOAAI
errJadhav, Prakash; Huang, Bo; Osipiuk, Jerzy; Zhang, Xiaoming; Tan, Haozhou; Tesar, Christine; Endres, Michael; Jedrzejczak, Robert; Tan, Bin; Deng, Xufang; Joachimiak, Andrzej; Cai, Jianfeng; Wang, Jun
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Overcoming cancer drug resistance with AI-designed RNA epigenetic inhibitors
err2023-12-01
err1
PREAI
errCheng, Jason X.; Wood, Shaun; Tang, Derrick; Degenstein, Linda; Joachimiak, Andrzej; Stevens, Rick
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Structure and enzymatic characterization of CelD endoglucanase from the anaerobic fungus Piromyces finnis
err2023-08-07
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errOAAI
errDementiev, Alexey; Lillington, Stephen P.; Jin, Shiyan; Kim, Youngchang; Jedrzejczak, Robert; Michalska, Karolina; Joachimiak, Andrzej; O'Malley, Michelle A.
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Promising approaches for the assembly of the catalytically active, recombinant Desulfomicrobium baculatum hydrogenase with substitutions at the active site
err2023-07-21
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errOAAI
errWitkowska, Malgorzata; Jedrzejczak, Robert P.; Joachimiak, Andrzej; Cavdar, Onur; Malankowska, Anna; Skowron, Piotr M.; Zylicz-Stachula, Agnieszka
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Sel1-like proteins and peptides are the major Oxalobacter formigenes-derived factors stimulating oxalate transport by human intestinal epithelial cells
err2023-07-01
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errOAAI
errArvans, Donna; Chang, Changsoo; Alshaikh, Altayeb; Tesar, Christine; Babnigg, Gyorgy; Wolfgeher, Don; Kron, Stephen; Antonopoulos, Dionysios; Bashir, Mohamed; Cham, Candace; Musch, Mark; Chang, Eugene; Joachimiak, Andrzej; Hassan, Hatim
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Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin
err2023-04-25
err23
errOAAI
errWydorski, Pawel M. M.; Osipiuk, Jerzy; Lanham, Benjamin T. T.; Tesar, Christine; Endres, Michael; Engle, Elizabeth; Jedrzejczak, Robert; Mullapudi, Vishruth; Michalska, Karolina; Fidelis, Krzysztof; Fushman, David; Joachimiak, Andrzej; Joachimiak, Lukasz A. A.
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