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Patrice M. Becker

National Institute of Health

29H-index
121Paper Count
3.0KCitation Count
Published Papers 40
Publication Date
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The importance of early-life cohort studies for understanding the origins of asthma and allergic diseases and the contribution of the NIAID
errJournal of Allergy and Clinical Immunology
IF11.2
err2026-08-10
err0
PREAI
errPatrice M. Becker; Patricia C. Fulkerson; Alkis Togias
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Virus reactivation in acute and long COVID-19
errNature
IF48.5
err2026-08-05
err0
errOAAI
errCole Maguire; Jing Chen; Nadine Rouphael; Brinkley A. Morse; Annmarie Hoch; Harry Pickering; Hoang Van Phan; Abigail Glascock; Victoria Chu; Ravi Dandekar; David Corry; Farrah Kheradmand; Lindsey R. Baden; Rafick-Pierre Sekaly; Grace A. McComsey; Elias K. Haddad; Charles B. Cairns; Bali Pulendran; Ana Fernandez-Sesma; Viviana Simon; Jordan P. Metcalf; Nelson I. Agudelo Higuita; William B. Messer; Mark M. Davis; Kari C. Nadeau; Monica Kraft; Chris Bime; Joanna Schaenman; David Erle; Carolyn S. Calfee; Mark A. Atkinson; Scott C. Brakenridge; Lauren I. R. Ehrlich; Ruth R. Montgomery; Albert Shaw; Catherine L. Hough; David Hafler; Alison D. Augustine; Patrice M. Becker; Bjoern Peters; Al Ozonoff; Seunghee Kim-Schulze; Florian Krammer; Steven E. Bosinger; Walter Eckalbar; Matthew C. Altman; Michael Wilson; Leying Guan; Steven H. Kleinstein; Kinga K. Smolen; Elaine F. Reed; Ofer Levy; Holden Maecker; Peter Hunt; Hanno Steen; Joann Diray-Arce; Charles R. Langelier; Esther Melamed
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Empiric azithromycin alters the upper respiratory microbiome and resistome without anti-inflammatory benefit in COVID-19
errNature Microbiology
IF19.4
err2026-03-16
err0
errOAAI
errAbigail Glascock; Cole Maguire; Hoang Van Phan; Emily C. Lydon; Joanna Schaenman; Carolyn S. Calfee; Esther Melamed; John Greenland; David B. Corry; Farrah Kheradmand; Lindsey R. Baden; Rafick Sekaly; Grace A. McComsey; Elias K. Haddad; Charles B. Cairns; Linda N. Geng; Bali Pulendran; Ana Fernandez-Sesma; Viviana Simon; Jordan P. Metcalf; Nelson I. Agudelo Higuita; William B. Messer; Mark M. Davis; Kari C. Nadeau; Monica Kraft; Christian Bime; David J. Erle; Mark A. Atkinson; Scott C. Brakenridge; Lauren I. R. Ehrlich; Ruth R. Montgomery; Albert C. Shaw; Catherine L. Hough; David A. Hafler; Alison D. Augustine; Patrice M. Becker; Bjoern Peters; Al Ozonoff; Annmarie Hoch; Seunghee Kim-Schulze; Florian Krammer; Steven Bosinger; Walter Eckalbar; Matthew C. Altman; Michael Wilson; Leying Guan; Holden Maecker; Hanno Steen; Joann Diray-Arce; Nadine Rouphael; Steven H. Kleinstein; Naresh Doni Jayavelu; Elaine F. Reed; Ofer Levy; Victoria T. Chu; Charles R. Langelier
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Author Correction: Machine learning models predict long COVID outcomes based on baseline clinical and immunologic factors
errCommunications Medicine
IF6.3
err2026-02-23
err0
errOAAI
errNaresh Doni Jayavelu; Hady Samaha; Sonia Tandon Wimalasena; Annmarie Hoch; Jeremy P. Gygi; Gisela Gabernet; Al Ozonoff; Shanshan Liu; Carly E. Milliren; Ofer Levy; Lindsey R. Baden; Esther Melamed; Lauren I. R. Ehrlich; Grace A. McComsey; Rafick P. Sekaly; Charles B. Cairns; Elias K. Haddad; Joanna Schaenman; Albert C. Shaw; David A. Hafler; Ruth R. Montgomery; David B. Corry; Farrah Kheradmand; Mark A. Atkinson; Scott C. Brakenridge; Nelson I. Agudelo Higuit; Jordan P. Metcalf; Catherine L. Hough; William B. Messer; Bali Pulendran; Kari C. Nadeau; Mark M. Davis; Linda N. Geng; Ana Fernandez Sesma; Viviana Simon; Florian Krammer; Monica Kraft; Chris Bime; Carolyn S. Calfee; David J. Erle; Charles R. Langelier; Leying Guan; Holden T. Maecker; Bjoern Peters; Steven H. Kleinstein; Elaine F. Reed; Alison D. Augustine; Joann Diray-Arce; Patrice M. Becker; Nadine Rouphael; Matthew C. Altman
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Machine learning models predict long COVID outcomes based on baseline clinical and immunologic factors
errCommunications Medicine
IF6.3
err2026-01-03
err0
errOAAI
errNaresh Doni Jayavelu; Hady Samaha; Sonia Tandon Wimalasena; Annmarie Hoch; Jeremy P. Gygi; Gisela Gabernet; Al Ozonoff; Shanshan Liu; Carly E. Milliren; Ofer Levy; Lindsey R. Baden; Esther Melamed; Lauren I. R. Ehrlich; Grace A. McComsey; Rafick P. Sekaly; Charles B. Cairns; Elias K. Haddad; Joanna Schaenman; Albert C. Shaw; David A. Hafler; Ruth R. Montgomery; David B. Corry; Farrah Kheradmand; Mark A. Atkinson; Scott C. Brakenridge; Nelson I. Agudelo Higuit; Jordan P. Metcalf; Catherine L. Hough; William B. Messer; Bali Pulendran; Kari C. Nadeau; Mark M. Davis; Linda N. Gen; Ana Fernandez Sesma; Viviana Simon; Florian Krammer; Monica Kraft; Chris Bime; Carolyn S. Calfee; David J. Erle; Charles R. Langelier; Leying Guan; Holden T. Maecker; Bjoern Peters; Steven H. Kleinstein; Elaine F. Reed; Alison D. Augustine; Joann Diray-Arce; Patrice M. Becker; Nadine Rouphael; Matthew C. Altman
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errSave
A multiomics recovery factor predicts long COVID in the IMPACC study
errJOURNAL OF CLINICAL INVESTIGATION
IF13.6
err2025-11-03
err0
errOAAI
errGabernet, Gisela; Maciuch, Jessica; Gygi, Jeremy P.; Moore, John F.; Hoch, Annmarie; Syphurs, Caitlin; Chu, Tianyi; Jayavelu, Naresh Doni; Corry, David B.; Kheradmand, Farrah; Baden, Lindsey R.; Sekaly, Rafick-Pierre; McComsey, Grace A.; Haddad, Elias K.; Cairns, Charles B.; Rouphael, Nadine; Fernandez-Sesma, Ana; Simon, Viviana; Metcalf, Jordan P.; Higuita, Nelson I. Agudelo; Hough, Catherine L.; Messer, William B.; Davis, Mark M.; Nadeau, Kari C.; Pulendran, Bali; Kraft, Monica; Bime, Chris; Reed, Elaine F.; Schaenman, Joanna; Erle, David J.; Calfee, Carolyn S.; Atkinson, Mark A.; Brakenridge, Scott C.; Melamed, Esther; Shaw, Albert C.; Hafler, David A.; Augustine, Alison D.; Becker, Patrice M.; Ozonoff, Al; Bosinger, Steven E.; Eckalbar, Walter; Maecker, Holden T.; Kim-Schulze, Seunghee; Steen, Hanno; Krammer, Florian; Westendorf, Kerstin; Peters, Bjoern; Fourati, Slim; Altman, Matthew C.; Levy, Ofer; Smolen, Kinga K.; Montgomery, Ruth R.; Diray-Arce, Joann; Kleinstein, Steven H.; Guan, Leying; Ehrlich, Lauren I. R.
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Distinct metabolomic profiles and systemic lipid dysregulation in longitudinal analysis of COVID-19 disease trajectory and long COVID outcomes
errJOURNAL OF IMMUNOLOGY
IF3.4
err2025-11-01
err0
PREAI
errChen, Jing; Mendez, Kevin; Petrova, Boryana; Hoch, Annmarie; Thomas, Sanya; Karoly, Meagan; Hutton, Scott; Wong, Kari; Michelloti, Greg; Cairns, Charles; Atkinson, Mark; Rouphael, Nadine; Augustine, Alison M.; Becker, Patrice; Ozonoff, Al; Steen, Hanno; Kanarek, Naama; Lasky-Su, Jessica; Levy, Ofer; Arce, Joann Diray
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Circulating endothelial signatures correlate with worse outcomes in COVID-19, respiratory failure and ARDS
errCritical Care
IF9.3
err2025-10-15
err0
errOAAI
errAna C. Costa Monteiro; Harry Pickering; Aartik Sarma; Clove S. Taylor; Meagan M. Jenkins; Fei-Man Hsu; Brian Nadel; Ofer Levy; Lindsey R. Baden; Esther Melamed; Lauren I. R. Ehrlich; Grace A. McComsey; Rafick P. Sekaly; Charles B. Cairns; Elias K. Haddad; Albert C. Shaw; David A. Hafler; Ruth R. Montgomery; David B. Corry; Farrah Kheradmand; Mark A. Atkinson; Scott C. Brakenridge; Nelson I. Agudelo Higuita; Jordan P. Metcalf; Catherine L. Hough; William B. Messer; Bali Pulendran; Kari C. Nadeau; Mark M. Davis; Linda N. Geng; Ana Fernandez-Sesma; Viviana Simon; Florian Krammer; Monica Kraft; Chris Bime; Carolyn S. Calfee; David J. Erle; Steve Bosinger; Walter Eckalbar; Holden Maecker; Adeeb Rahman; Leying Guan; Bjoern Peters; Steven H. Kleinstein; Alison D. Augustine; Joann Diray-Arce; Patrice M. Becker; Nadine Rouphael; Michael Agus; Hrishikesh Kulkarni; Joanna M. Schaenmann; Ramin Salehi-Rad; Michael A. Matthay; Elaine F. Reed; Anil Sapru
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Single cell transcriptomic profiling of eosinophils and airway immune cells in childhood asthma
errJournal of Allergy and Clinical Immunology
IF11.2
err2025-07-18
err0
PREAI
errNaresh Doni Jayavelu; Andrew H. Liu; Courtney Gaberino; Kristy Freeman; Matthew Lawrance; Stephan Pribitzer; Clara Seifert; Cullen Dutmer; Alkis Togias; Patrice M. Becker; William W. Busse; Christine A. Sorkness; Carmen Mikacenic; Kimberly A. Dill-McFarland; Daniel J. Jackson; Matthew C. Altman
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Dysregulation of airway and systemic interferon responses promotes asthma exacerbations in urban children
errJOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
IF11.2
err2025-01-01
err1
PREAI
errGaberino, Courtney L.; Altman, Matthew C.; Gill, Michelle A.; Bacharier, Leonard B.; Gruchalla, Rebecca S.; O'Connor, George T.; Kumar, Rajesh; Hershey, Gurjit K. Khurana; Kattan, Meyer; Liu, Andrew H.; Teach, Stephen J.; Zoratti, Edward M.; Becker, Patrice M.; Togias, Alkis; Visness, Cynthia; Gern, James E.; Busse, William W.; Jackson, Daniel J.
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Activated sputum eosinophils associated with exacerbations in children on mepolizumab
errJOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
IF11.2
err2024-08-01
err5
errOAAI
errWilson, Gabriella E.; Knight, James; Liu, Qing; Shelar, Ashish; Stewart, Emma; Wang, Xiaomei; Van, Xiting; Sanders, Joshua; Visness, Cynthia; Gill, Michelle; Gruchalla, Rebecca; Liu, Andrew H.; Kattan, Meyer; Hershey, Gurjit K. Khurana; Togias, Alkis; Becker, Patrice M.; Altman, Matthew C.; Busse, William W.; Jackson, Daniel J.; Montgomery, Ruth R.; Chupp, Geoffrey L.
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Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortality
errJOURNAL OF CLINICAL INVESTIGATION
IF13.6
err2024-05-01
err1
errOAAI
errGygi, Jeremy P.; Maguire, Cole; Patel, Ravi K.; Shinde, Pramod; Konstorum, Anna; Shannon, Casey P.; Xu, Leqi; Hoch, Annmarie; Jayavelu, Naresh Doni; Haddad, Elias K.; Reed, Elaine F.; Kraft, Monica; McComsey, Grace A.; Metcalf, Jordan P.; Ozonoff, Al; Esserman, Denise; Cairns, Charles B.; Rouphael, Nadine; Bosinger, Steven E.; Kim-Schulze, Seunghee; Krammer, Florian; Rosen, Lindsey B.; Bakel, Harm van; Wilson, Michael; Eckalbar, Walter L.; Maecker, Holden T.; Langelier, Charles R.; Steen, Hanno; Altman, Matthew C.; Montgomery, Ruth R.; Levy, Ofer; Melamed, Esther; Pulendran, Bali; Diray-Arce, Joann; Smolen, Kinga K.; Fragiadakis, Gabriela K.; Becker, Patrice M.; Sekaly, Rafick P.; Ehrlich, Lauren I. R.; Fourati, Slim; Peters, Bjoern; Kleinstein, Steven H.; Guan, Leying
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Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology
errSCIENCE TRANSLATIONAL MEDICINE
IF14.6
err2024-04-17
err1
errOAAI
errPhan, Hoang Van; Tsitsiklis, Alexandra; Maguire, Cole; Haddad, Elias; Becker, Patrice; Kim-Schulze, Seunghee; Lee, Brian; Chen, Jing; Hoch, Annmarie; Pickering, Harry; van Zalm, Patrick; Altman, Matthew; Augustine, Alison; Calfee, Carolyn; Bosinger, Steve; Cairns, Charles; Eckalbar, Walter; Guan, Leying; Jayavelu, Naresh Doni; Kleinstein, Steven; Krammer, Florian; Maecker, Holden; Ozonoff, Al; Peters, Bjoern; Rouphael, Nadine; Montgomery, Ruth; Reed, Elaine; Schaenman, Joanna; Steen, Hanno; Levy, Ofer; Diray-Arce, Joann; Langelier, Charles
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Analytical challenges in omics research on asthma and allergy: A National Institute of Allergy and Infectious Diseases workshop
errJOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
IF11.2
err2024-04-01
err2
PREAI
errBunyavanich, Supinda; Becker, Patrice M.; Altman, Matthew C.; Lasky-Su, Jessica; Ober, Carole; Zengler, Karsten; Berdyshev, Evgeny; Bonneau, Richard; Chatila, Talal; Chatterjee, Nilanjan; Chung, Kian Fan; Cutcliffe, Colleen; Davidson, Wendy; Dong, Gang; Fang, Gang; Fulkerson, Patricia; Himes, Blanca E.; Liang, Liming; Mathias, Rasika A.; Ogino, Shuji; Petrosino, Joseph; Price, Nathan D.; Schadt, Eric; Schofield, James; Seibold, Max A.; Steen, Hanno; Wheatley, Lisa; Zhang, Hongmei; Togias, Alkis; Hasegawa, Kohei
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Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: results from the IMPACC study (vol 83, 104208, 2022)
errEBIOMEDICINE
IF10.8
err2023-12-01
err0
errOAAI
errOzonoff, Al; Schaenman, Joanna; Jayavelu, Naresh Doni; Milliren, Carly E.; Calfee, Carolyn S.; Cairns, Charles B.; Kraft, Monica; Baden, Lindsey R.; Shaw, Albert C.; Krammer, Florian; van Bakel, Harm; Esserman, Denise A.; Liu, Shanshan; Sesma, Ana Fernandez; Simon, Viviana; Hafler, David A.; Montgomery, Ruth R.; Kleinstein, Steven H.; Levy, Ofer; Bime, Chris; Haddad, Elias K.; Erle, David J.; Pulendran, Bali; Nadeau, Kari C.; Davis, Mark M.; Hough, Catherine L.; Messer, William B.; Higuita, Nelson I. Agudelo; Metcalf, Jordan P.; Atkinson, Mark A.; Brakenridge, Scott C.; Corry, David; Kheradmand, Farrah; Ehrlich, Lauren I. R.; Melamed, Esther; Mccomsey, Grace A.; Sekaly, Rafick; Diray-Arce, Joann; Peters, Bjoern; Augustine, Alison D.; Reed, Elaine F.; Altman, Matthew C.; Becker, Patrice M.; Rouphael, Nadine
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Relationship of Heterologous Virus Responses and Outcomes in Hospitalized COVID-19 Patients
errJOURNAL OF IMMUNOLOGY
IF3.4
err2023-10-15
err1
errOAAI
errRosenberg-Hasson, Yael; Holmes, Tyson H.; Diray-Arce, Joann; Chen, Jing; Kellogg, Ryan; Snyder, Michael; Becker, Patrice M.; Ozonoff, Al; Rouphael, Nadine; Reed, Elaine F.; Maecker, Holden T.
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Updates in SJS/TEN: collaboration, innovation, and community
errFRONTIERS IN MEDICINE
IF3
err2023-10-11
err13
errOAAI
errMarks, Madeline E.; Botta, Ramya Krishna; Abe, Riichiro; Beachkofsky, Thomas M.; Boothman, Isabelle; Carleton, Bruce C.; Chung, Wen-Hung; Cibotti, Ricardo R.; Dodiuk-Gad, Roni P.; Grimstein, Christian; Hasegawa, Akito; Hoofnagle, Jay H.; Hung, Shuen-Iu; Kaffenberger, Benjamin; Kroshinsky, Daniela; Lehloenya, Rannakoe J.; Martin-Pozo, Michelle; Micheletti, Robert G.; Mockenhaupt, Maja; Nagao, Keisuke; Pakala, Suman; Palubinsky, Amy; Pasieka, Helena B.; Peter, Jonathan; Pirmohamed, Munir; Reyes, Melissa; Saeed, Hajirah N.; Shupp, Jeffery; Sukasem, Chonlaphat; Syu, Jhih Yu; Ueta, Mayumi; Zhou, Li; Chang, Wan-Chun; Becker, Patrice; Bellon, Teresa; Bonnet, Kemberlee; Cavalleri, Gianpiero; Chodosh, James; Dewan, Anna K.; Dominguez, Arturo; Dong, Xinzhong; Ezhkova, Elena; Fuchs, Esther; Goldman, Jennifer; Himed, Sonia; Mallal, Simon; Markova, Alina; McCawley, Kerry; Norton, Allison E.; Ostrov, David; Phan, Michael; Sanford, Arthur; Schlundt, David; Schneider, Daniel; Shear, Neil; Shinkai, Kanade; Tkaczyk, Eric; Trubiano, Jason A.; Volpi, Simona; Bouchard, Charles S.; Divito, Sherrie J.; Phillips, Elizabeth J.
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Type 2 inflammation reduces SARS-CoV-2 replication in the airway epithelium in allergic asthma through functional alteration of ciliated epithelial cells
errJOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
IF11.2
err2023-07-01
err12
errOAAI
errJayavelu, Naresh Doni; Altman, Matthew C.; Benson, Basilin; Dufort, Matthew J.; Vanderwall, Elizabeth R.; Rich, Lucille M.; White, Maria P.; Becker, Patrice M.; Togias, Alkis; Jackson, Daniel J.; Debley, Jason S.
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Phase 2, randomized, double-blind, placebo-controlled multi- center trial of the clinical and biological effects of anti-CD14 treatment in hospitalized patients with COVID-19 pneumonia
errEBIOMEDICINE
IF10.8
err2023-07-01
err4
errOAAI
errMabrey, F. Linzee; Nian, Hui; Yu, Chang; Barnes, Elizabeth M.; Malhotra, Uma; Mikacenic, Carmen; Goldstein, Julia; O'Mahony, D. Shane; Garcia-Diaz, Julia; Finn, Patricia; Voelker, Kirk; Morrell, Eric D.; Self, Wesley H.; Becker, Patrice M.; Martin, Thomas R.; Wurfel, Mark M.
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Multi-omic association study identifies DNA methylation-mediated genotype and smoking exposure effects on lung function in children living in urban settings
errPLOS GENETICS
IF3.7
err2023-01-13
err5
errOAAI
errDapas, Matthew; Thompson, Emma; Wentworth-Sheilds, William; Clay, Selene; Visness, Cynthia M.; Calatroni, Agustin; Sordillo, Joanne E.; Gold, Diane R.; Wood, Robert A.; Makhija, Melanie; Khurana Hershey, Gurjit; Sherenian, Michael G.; Gruchalla, Rebecca S.; Gill, Michelle A.; Liu, Andrew H.; Kim, Haejin; Kattan, Meyer; Bacharier, Leonard B.; Rastogi, Deepa; Altman, Matthew C.; Busse, William W.; Becker, Patrice M.; Nicolae, Dan; O'Connor, George T.; Gern, James E.; Jackson, Daniel J.; Ober, Carole
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Research Directions

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Co-authors
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