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Avik Biswas

the salk institute for biological studies

22H-index
69Paper Count
1.1KCitation Count
Published Papers 24
Publication Date
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Temporal Evolution of Drug Resistance to HIV Integrase Inhibitors
errViruses
IF3.5
err2026-05-08
err0
errOAAI
errIndrani Choudhuri; Jocelyn G. Olvera; Avik Biswas; Allan Haldane; Ronald M. Levy; Dmitry Lyumkis
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Using phage display for rational engineering of a higher-affinity humanized 3’ phosphohistidine-specific antibody
errCommunications Chemistry
IF6.2
err2025-11-27
err0
errOAAI
errGregory D. Martyn; Rajasree Kalagiri; Gianluca Veggiani; Robyn L. Stanfield; Indrani Choudhuri; Margaux Sala; Jill Meisenhelder; Chao Chen; Avik Biswas; Ronald M. Levy; Dmitry Lyumkis; Ian A. Wilson; Tony Hunter; Sachdev S. Sidhu
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Oligomeric HIV-1 integrase structures reveal functional plasticity for intasome assembly and RNA binding
errNature Communications
IF15.7
err2025-10-24
err0
errOAAI
errTao Jing; Zelin Shan; Tung Dinh; Avik Biswas; Sooin Jang; Juliet Greenwood; Min Li; Zeyuan Zhang; Gennavieve Gray; Hye Jeong Shin; Bo Zhou; Dario Passos; Timothy S. Strutzenberg; Sriram Aiyer; Leonardo Andrade; Yuxuan Zhang; Zhen Li; Robert Craigie; Alan N. Engelman; Mamuka Kvaratskhelia; Dmitry Lyumkis
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Kinetic coevolutionary models predict the temporal emergence of HIV-1 resistance mutations under drug selection pressure
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2024-04-01
err1
PREAI
errBiswas, Avik; Choudhuri, Indrani; Arnold, Eddy; Lyumkis, Dmitry; Haldane, Allan; Levy, Ronald M.
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Elucidating the Molecular Determinants of the Binding Modes of a Third-Generation HIV-1 Integrase Strand Transfer Inhibitor: The Importance of Side Chain and Solvent Reorganization
errVIRUSES-BASEL
IF3.5
err2024-01-02
err2
errOAAI
errSun, Qinfang; Biswas, Avik; Lyumkis, Dmitry; Levy, Ronald; Deng, Nanjie
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Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants
errSCIENCE ADVANCES
IF12.5
err2023-07-21
err11
errOAAI
errLi, Min; Passos, Dario Oliveira; Shan, Zelin; Smith, Steven J.; Sun, Qinfang; Biswas, Avik; Choudhuri, Indrani; Strutzenberg, Timothy S.; Haldane, Allan; Deng, Nanjie; Li, Zhaoyang; Zhao, Xue Zhi; Briganti, Lorenzo; Kvaratskhelia, Mamuka; Burke Jr, Terrence R. R.; Levy, Ronald M.; Hughes, Stephen H.; Craigie, Robert; Lyumkis, Dmitry
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Editorial: Origin and evolution of hepatitis viruses, volume II
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2023-07-11
err1
errOAAI
errBiswas, Avik; Datta, Sibnarayan
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The HBV web: An insight into molecular interactomes between the hepatitis B virus and its host en route to hepatocellular carcinoma
errJOURNAL OF MEDICAL VIROLOGY
IF4.6
err2023-01-04
err17
PREAI
errKar, Arpita; Samanta, Abhisekh; Mukherjee, Soumyadeep; Barik, Subhasis; Biswas, Avik
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Structure-based virtual screening workflow to identify antivirals targeting HIV-1 capsid
errJOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
IF3.1
err2022-03-09
err4
errOAAI
errSun, Qinfang; Biswas, Avik; Vijayan, R. S. K.; Craveur, Pierrick; Forli, Stefano; Olson, Arthur J.; Castaner, Andres Emanuelli; Kirby, Karen A.; Sarafianos, Stefan G.; Deng, Nanjie; Levy, Ronald
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Familiarity Breeds Strategy: In Silico Untangling of the Molecular Complexity on Course of Autoimmune Liver Disease-to-Hepatocellular Carcinoma Transition Predicts Novel Transcriptional Signatures
errCELLS
IF5.2
err2021-07-29
err14
errOAAI
errMukherjee, Soumyadeep; Kar, Arpita; Khatun, Najma; Datta, Puja; Biswas, Avik; Barik, Subhasis
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Oregano Oil and Its Principal Component, Carvacrol, Inhibit HIV-1 Fusion into Target Cells
errJOURNAL OF VIROLOGY
IF3.8
err2020-07-16
err44
errOAAI
errMediouni, S.; Jablonski, J. A.; Tsuda, S.; Barsamian, A.; Kessing, C.; Richard, A.; Biswas, A.; Toledo, F.; Andrade, V. M.; Even, Y.; Stevenson, M.; Tellinghuisen, T.; Choe, H.; Cameron, M.; Bannister, T. D.; Valente, S. T.
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Epistasis and entrenchment of drug resistance in HIV-1 subtype B
errELIFE
IF0
err2019-10-08
err28
errOAAI
errBiswas, Avik; Haldane, Allan; Arnold, Eddy; Levy, Ronald M.
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A Massively Parallel Selection of Small Molecule-RNA Motif Binding Partners Informs Design of an Antiviral from Sequence
errCHEM
IF19.6
err2018-10-01
err46
errOAAI
errChilds-Disney, Jessica L.; Tuan Tran; Vummidi, Balayeshwanth R.; Velagapudi, Sai Pradeep; Haniff, Hafeez S.; Matsumoto, Yasumasa; Crynen, Gogce; Southern, Mark R.; Biswas, Avik; Wang, Zi-Fu; Tellinghuisen, Timothy L.; Disney, Matthew D.
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Interaction between Nonstructural Proteins NS4B and NS5A Is Essential for Proper NS5A Localization and Hepatitis C Virus RNA Replication
errJOURNAL OF VIROLOGY
IF3.8
err2016-08-15
err20
errOAAI
errBiswas, Avik; Treadaway, Jason; Tellinghuisen, Timothy L.
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Tumor suppressor micro RNA miR-145 and onco micro RNAs miR-21 and miR-222 expressions are differentially modulated by Hepatitis B virus X protein in malignant hepatocytes
errBMC CANCER
IF3.4
err2014-09-26
err59
errOAAI
errBandopadhyay, Manikankana; Banerjee, Arup; Sarkar, Neelakshi; Panigrahi, Rajesh; Datta, Sibnarayan; Pal, Ananya; Singh, Shivram Prasad; Biswas, Avik; Chakrabarti, Shekhar; Chakravarty, Runu
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Shift in the hepatitis B virus genotype distribution in the last decade among the HBV carriers from eastern India: Possible effects on the disease status and hbv epidemiology
errJOURNAL OF MEDICAL VIROLOGY
IF4.6
err2013-06-13
err15
PREAI
errBiswas, Avik; Panigrahi, Rajesh; Pal, Manisha; Chakraborty, Subhasis; Bhattacharya, Prasun; Chakrabarti, Shekhar; Chakravarty, Runu
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Characterization of antiviral resistance mutations among the Eastern Indian Hepatitis B virus infected population
errVIROLOGY JOURNAL
IF3.8
err2013-02-14
err16
errOAAI
errPanigrahi, Rajesh; Biswas, Avik; De, Binay Krishna; Chakrabarti, Sekhar; Chakravarty, Runu
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Occult HBV infection among anti-HBc positive HIV-infected patients in apex referral centre, Eastern India
errANNALS OF HEPATOLOGY
IF4.4
err2012-11-01
err18
errOAAI
errPanigrahi, R.; Majumder, S.; Gooptu, M.; Biswas, A.; Datta, S.; Chandra, P. K.; Banerjee, A.; Chakrabarti, S.; Bandopadhyay, D.; De, B. K.; Chakravarty, R.
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Variations in the Functional Domain of Basal Core Promoter of Hepatitis B Virus Among Eastern Indian Patients With Prevalence of Genotypes A, C, and D Among the Same Ethnic Population
errJOURNAL OF MEDICAL VIROLOGY
IF4.6
err2010-12-22
err24
PREAI
errBiswas, Avik; Banerjee, Arup; Chandra, Partha Kumar; Datta, Sibnarayan; Panigrahi, Rajesh; Dutta, Deep; De, Binay Krishna; Pal, Manisha; Guha, Subhashish Kamal; Chakrabarti, Sekhar; Chakravarty, Runu
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Anti-hepatitis B core antigen testing with detection and characterization of occult hepatitis B virus by an in-house nucleic acid testing among blood donors in Behrampur, Ganjam, Orissa in southeastern India: implications for transfusion
errVIROLOGY JOURNAL
IF3.8
err2010-08-27
err52
errOAAI
errPanigrahi, Rajesh; Biswas, Avik; Datta, Sibnarayan; Banerjee, Arup; Chandra, Partha K.; Mahapatra, Pradip K.; Patnaik, Bharat; Chakrabarti, Sekhar; Chakravarty, Runu
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Research Directions

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Co-authors
Cooperation Journals
I
Ian A. Wilson
H-index: 179 · Papers: 1.7K
T
Tony Hunter
H-index: 173 · Papers: 652
R
Ronald Levy
H-index: 127 · Papers: 1.1K
S
Stephen H. Hughes
H-index: 91 · Papers: 514
E
Eddy Arnold
H-index: 87 · Papers: 497
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