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Andrew E. Allen

University of California System

68H-index
273Paper Count
1.9WCitation Count
Published Papers 110
Publication Date
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Molecular evidence for a relict marine community in an Antarctic Dry Valleys subglacial brine-fed system
errNature Geoscience
IF16.1
err2026-08-03
err0
errOAAI
errAngela Zoumplis; Zoltan Füssy; Drishti Kaul; Nicholas Schulte; Hong Zheng; Robert H. Lampe; Karolina Brylka; Pratap Venepally; Jill A. Mikucki; Diane M. McKnight; Andrew E. Allen
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Microbial and small zooplankton communities predict density of baleen whales in the southern California Current Ecosystem
errPLoS One
IF2.6
err2026-05-06
err0
PREAI
errSatterthwaite, Erin V.; Ruiz, Trevor D.; Patin, Nastassia V.; Alksne, Michaela N.; Thomas, Len; Dinasquet, Julie; Lampe, Robert H.; Chan, Katherine G.; Patrick, Nicholas A.; Allen, Andrew E.; Baumann-Pickering, Simone; Semmens, Brice X.
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Molecular and physiological acclimation to low light and iron scarcity in a globally abundant oceanic pelagophyte
errNature Communications
IF15.7
err2026-04-20
err0
errOAAI
errT. H. Coale; R. H. Lampe; M. Tan; E. Rowland; Z. Füssy; P. Venepally; H. Zheng; J. McCrow; E. M. Bertrand; A. E. Allen
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Phytoplankton community composition in the oligotrophic Argo Basin of the eastern Indian Ocean
errDeep-Sea Research Part II-Topical Studies in Oceanography
IF3
err2026-02-01
err1
PREAI
errSelph, Karen E.; Lampe, Robert H.; Yingling, Natalia; Bhabu, Ria; Kranz, Sven A.; Allen, Andrew E.; Landry, Michael R.
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Iterative pathway engineering of the diatom Phaeodactylum tricornutum to enhance the biosynthesis of long-chain polyunsaturated fatty acids using the Cre recombinase-mediated marker recycling
errNew Phytologist
IF8.1
err2025-12-12
err0
errOAAI
errJunkai Zhu; Weizhong Chen; Shuangqing Li; Andrew E. Allen; Xinde Xu; Xiaoping Wang; Haibo Jiang; Yangmin Gong
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Relationships between phytoplankton pigments and DNA- or RNA-based abundances support ecological applications
errBIOGEOSCIENCES
IF3.9
err2025-11-14
err0
errOAAI
errLampe, Robert H.; Rabines, Ariel J.; Wood-Rocca, Steffaney M.; Schulberg, Anne; Goericke, Ralf; Venepally, Pratap; Zheng, Hong; Stukel, Michael R.; Landry, Michael R.; Barton, Andrew D.; Allen, Andrew E.
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A digital PCR assay for the dabA gene involved in domoic acid biosynthesis by Pseudo-nitzschia spp
errHarmful Algae
IF4.5
err2025-11-12
err0
PREAI
errChloe Weinstock; Christina Preston; John K. Brunson; William Ussler; Holly Bowers; Kevan Yamahara; Greg Doucette; John Ryan; Andrew Allen; Christopher Scholin; James Birch
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Overview of BLOOFINZ/INDITUN investigations of the southern bluefin spawning region off northwest Australia, January-March 2022
errDEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY
IF3
err2025-11-01
err7
errOAAI
errLandry, Michael R.; Laiz-Carrion, Raul; Kranz, Sven A.; Selph, Karen E.; Stukel, Michael R.; Malca, Estrella; Dief, David; Beckleyg, Lynnath E.; Decima, Moira; Swalethorp, Rasmus; Quintanilla, Jose M.; Yingling, Natalia; Davies, Claire H.; Trabonii, Claudia; Borrego-Santos, Ricardo; Goes, Joaquim I.; De Souza, Ariana; Romero-Fernandez, Patricia; Pennino, M. Grazia; Kim, Lindsey E.; Kehinde, Opeyemi; Lampe, Robert H.; Allen, Andrew E.; Kelly, Thomas B.; Muhling, Barbara A.; Gu, Shuai; Cassar, Nicolas; Laget, Manon; Biard, Tristan; Liu, Hongbin; Ioq, Kai Hong; Shiroza, Akihiro; Cawley, Grace F.; Fender, Christian K.; Roses, Jared M.; Jivanjee, Alejandro; Matisons, Luke
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Zinc stimulation of phytoplankton in a low-carbon-dioxide, coastal Antarctic environment: evidence for the Zn hypothesis
errBiogeosciences
IF3.9
err2025-10-22
err2
errOAAI
errKell, Riss M.; Subhas, Adam V.; Schanke, Nicole L.; Lees, Lauren E.; Chmiel, Rebecca J.; Rao, Deepa; Brisbin, Margaret M.; Moran, Dawn M.; Mcilvin, Matthew R.; Bolinesi, Francesco; Mangoni, Olga; Casotti, Raffaella; Balestra, Cecilia; Horner, Tristan J.; Dunbar, Robert B.; Allen, Andrew E.; Ditullio, Giacomo R.; Saito, Mak A.
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Domoic acid biosynthesis and genome expansion in Nitzschia navis-varingica
errMBIO
IF4.7
err2025-10-01
err0
PREAI
errWood-Rocca, Steffaney M.; Allsing, Nicholas; Ashida, Yasuhiro; Mochizuki, Masaki; Moore, Malia L.; Fussy, Zoltan; Kotaki, Yuichi; Puilingi, Clyde; Maeno, Yukari; Beattie, Aodhan W.; Allen, Andrew E.; Yotsu-Yamashita, Mari; Michael, Todd P.; Moore, Bradley S.
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Genome-resolved biogeography of Phaeocystales, cosmopolitan bloom-forming algae
errNature Communications
IF15.7
err2025-09-29
err0
errOAAI
errZoltán Füssy; Robert H. Lampe; Kevin R. Arrigo; Kerrie Barry; Margaret M. Brisbin; Corina P. D. Brussaard; Johan Decelle; Colomban de Vargas; Giacomo R. DiTullio; Liam D. H. Elbourne; Marc E. Frischer; David M. Goodstein; Igor V. Grigoriev; Richard D. Hayes; Adam L. Healey; Chase C. James; Jerry W. Jenkins; Caroline Juery; Manish Kumar; Adam B. Kustka; Florian Maumus; Anna M. G. Novák Vanclová; Miroslav Oborník; Ian T. Paulsen; Ian Probert; Mak A. Saito; Jeremy Schmutz; Tomáš Skalický; Diego Tec-Campos; Hannah Tomelka; Pavlína Věchtová; Pratap Venepally; Brendan Wilson-Mortier; Karsten Zengler; Hong Zheng; Andrew E. Allen
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An undescribed species within the Gymnodinium sensu stricto group found responsible for an exceptional bloom in the Southern Ocean
errJOURNAL OF PHYCOLOGY
IF3.4
err2025-09-01
err0
PREAI
errMascioni, Martina; Cusick, Allison; Sanchez-Puerta, Maria Virginia; Johnson, Christian; Zheng, Hong; Reynolds, Rick A.; Allen, Andrew E.; Almandoz, Gaston O.
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Disturbance ecology in a pelagic upwelling biome: Lagrangian frameworks for studying succession
errBIOSCIENCE
IF7.6
err2025-09-01
err0
errOAAI
errStukel, Michael R.; Allen, Andrew E.; Barbeau, Katherine A.; Chabert, Pierre; Dovel, Shonna; Gangrade, Shailja; Kranz, Sven A.; Lampe, Robert H.; Landry, Michael R.; Marrec, Pierre; Messie, Monique; Miller, Arthur J.; Wilkinson, Grace; Ohman, Mark D.
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Overturning circulation structures the microbial functional seascape of the South Pacific
errScience
IF45.8
err2025-07-10
err0
PREAI
errBethany C. Kolody; Rohan Sachdeva; Hong Zheng; Zoltán Füssy; Eunice Tsang; Rolf E. Sonnerup; Sarah G. Purkey; Eric E. Allen; Jillian F. Banfield; Andrew E. Allen
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Transportome remodeling of a symbiotic microalga inside a planktonic host
errISME JOURNAL
IF10
err2024-12-10
err1
errOAAI
errJuery, Caroline; Auladell, Adria; Fussy, Zoltan; Chevalier, Fabien; Yee, Daniel P.; Pelletier, Eric; Corre, Erwan; Allen, Andrew E.; Richter, Daniel J.
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Molecular Mechanisms for Iron Uptake and Homeostasis in Marine Eukaryotic Phytoplankton
errANNUAL REVIEW OF MICROBIOLOGY
IF9.9
err2024-11-10
err0
PREAI
errLampe, Robert H.; Coale, Tyler H.; McQuaid, Jeffrey B.; Allen, Andrew E.
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Endemic, cosmopolitan, and generalist taxa and their habitat affinities within a coastal marine microbiome
errSCIENTIFIC REPORTS
IF3.9
err2024-09-28
err0
errOAAI
errJames, Chase C.; Allen, Andrew E.; Lampe, Robert H.; Rabines, Ariel; Barton, Andrew D.
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Metatranscriptomic response of deep ocean microbial populations to infusions of oil and/or synthetic chemical dispersant
errAPPLIED AND ENVIRONMENTAL MICROBIOLOGY
IF3.7
err2024-08-21
err0
errOAAI
errPena-Montenegro, Tito D.; Kleindienst, Sara; Allen, Andrew E.; Eren, A. Murat; Mccrow, John P.; Arnold, Jonathan; Joye, Samantha B.
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Delta-5 elongase knockout reduces docosahexaenoic acid and lipid synthesis and increases heat sensitivity in a diatom
errPLANT PHYSIOLOGY
IF6.9
err2024-05-26
err2
PREAI
errZhu, Junkai; Li, Shuangqing; Chen, Weizhong; Xu, Xinde; Wang, Xiaoping; Wang, Xinwei; Han, Jichang; Jouhet, Juliette; Amato, Alberto; Marechal, Eric; Hu, Hanhua; Allen, Andrew E.; Gong, Yangmin; Jiang, Haibo
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Iron limitation of heterotrophic bacteria in the California Current System tracks relative availability of organic carbon and iron
errISME JOURNAL
IF10
err2024-04-16
err1
errOAAI
errManck, Lauren E.; Coale, Tyler H.; Stephens, Brandon M.; Forsch, Kiefer O.; Aluwihare, Lihini, I; Dupont, Christopher L.; Allen, Andrew E.; Barbeau, Katherine A.
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Research Directions

No research directions
Co-authors
Cooperation Journals
A
Alisdair R. Fernie
H-index: 170 · Papers: 1.7K
B
Bernhard Ø. Palsson
H-index: 166 · Papers: 1.2K
J
Jillian F. Banfield
H-index: 154 · Papers: 935
M
Mark H. Ellisman
H-index: 126 · Papers: 769
I
Ian T. Paulsen
H-index: 125 · Papers: 514
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