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Daniel B. Rainbow

Department of Clinical Neurosciences

27H-index
85Paper Count
5.5KCitation Count
Published Papers 33
Publication Date
Multimodal profiling reveals tissue-directed signatures of human immune cells altered with age
err2025-08-13
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errSteven B. Wells; Daniel B. Rainbow; Michal Mark; Peter A. Szabo; Can Ergen; Daniel P. Caron; Ana Raquel Maceiras; Elior Rahmani; Eli Benuck; Valeh Valiollah Pour Amiri; David Chen; Allon Wagner; Sarah K. Howlett; Lorna B. Jarvis; Karen L. Ellis; Masaru Kubota; Rei Matsumoto; Krishnaa Mahbubani; Kouresh Saeb-Parsy; Cecilia Dominguez Conde; Laura Richardson; Chuan Xu; Shuang Li; Lira Mamanova; Liam Bolt; Alicja Wilk; Sarah A. Teichmann; Donna L. Farber; Peter A. Sims; Joanne L. Jones; Nir Yosef
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FlowAtlas: an interactive tool for high-dimensional immunophenotyping analysis bridging FlowJo with computational tools in Julia
err2024-07-17
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errCoppard, Valerie; Szep, Grisha; Georgieva, Zoya; Howlett, Sarah K.; Jarvis, Lorna B.; Rainbow, Daniel B.; Suchanek, Ondrej; Needham, Edward J.; Mousa, Hani S.; Menon, David K.; Feyertag, Felix; Mahbubani, Krishnaa T.; Saeb-Parsy, Kourosh; Jones, Joanne L.
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Human γδ T cells in diverse tissues exhibit site-specific maturation dynamics across the life span
err2024-06-07
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errGray, Joshua I.; Caron, Daniel P.; Wells, Steven B.; Guyer, Rebecca; Szabo, Peter; Rainbow, Daniel; Ergen, Can; Rybkina, Ksenia; Bradley, Marissa C.; Matsumoto, Rei; Pethe, Kalpana; Kubota, Masaru; Teichmann, Sarah; Jones, Joanne; Yosef, Nir; Atkinson, Mark; Brusko, Maigan; Brusko, Todd M.; Connors, Thomas J.; Sims, Peter A.; Farber, Donna L.
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Therapeutically expanded human regulatory T-cells are super-suppressive due to HIF1A induced expression of CD73
err2021-10-14
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errJarvis, Lorna B.; Rainbow, Daniel B.; Coppard, Valerie; Howlett, Sarah K.; Georgieva, Zoya; Davies, Jessica L.; Mullay, Harpreet Kaur; Hester, Joanna; Ashmore, Tom; Van den Bosch, Aletta; Grist, James T.; Coles, Alasdair J.; Mousa, Hani S.; Pluchino, Stefano; Mahbubani, Krishnaa T.; Griffin, Julian L.; Saeb-Parsy, Kourosh; Issa, Fadi; Peruzzotti-Jametti, Luca; Wicker, Linda S.; Jones, Joanne L.
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The MS Remyelinating Drug Bexarotene (an RXR Agonist) Promotes Induction of Human Tregs and Suppresses Th17 Differentiation In Vitro
err2021-08-10
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errGaunt, Christopher M.; Rainbow, Daniel B.; Mackenzie, Ruairi J.; Jarvis, Lorna B.; Mousa, Hani S.; Cunniffe, Nicholas; Georgieva, Zoya; Brown, J. William; Coles, Alasdair J.; Jones, Joanne L.
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Chronic Immune Activation in Systemic Lupus Erythematosus and the Autoimmune PTPN22 Trp620 Risk Allele Drive the Expansion of FOXP3+ Regulatory T Cells and PD-1 Expression
err2019-11-08
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errFerreira, Ricardo C.; Dopico, Xaquin Castro; Oliveira, Joao J.; Rainbow, Daniel B.; Yang, Jennie H.; Trzupek, Dominik; Todd, Sarah A.; McNeill, Mhairi; Steri, Maristella; Orru, Valeria; Fiorillo, Edoardo; Crouch, Daniel J. M.; Pekalski, Marcin L.; Cucca, Francesco; Tree, Tim, I; Vyse, Tim J.; Wicker, Linda S.; Todd, John A.
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Stochastic search and joint fine-mapping increases accuracy and identifies previously unreported associations in immune-mediated diseases
err2019-07-19
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errAsimit, Jennifer L.; Rainbow, Daniel B.; Fortune, Mary D.; Grinberg, Nastasiya F.; Wicker, Linda S.; Wallace, Chris
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Keratinocyte growth factor impairs human thymic recovery from lymphopenia
err2019-06-20
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errColes, Alasdair J.; Azzopardi, Laura; Kousin-Ezewu, Onajite; Mullay, Harpreet Kaur; Thompson, Sara A. J.; Jarvis, Lorna; Davies, Jessica; Howlett, Sarah; Rainbow, Daniel; Babar, Judith; Sadler, Timothy J.; Brown, J. William L.; Needham, Edward; May, Karen; Georgieva, Zoya G.; Handel, Adam E.; Maio, Stefano; Deadman, Mary; Rota, Ioanna; Hollander, Georg; Dawson, Sarah; Jayne, David; Seggewiss-Bernhardt, Ruth; Douek, Daniel C.; Isaacs, John D.; Jones, Joanne L.
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Genetic and functional data identifying Cd101 as a type 1 diabetes (T1D) susceptibility gene in nonobese diabetic (NOD) mice
err2019-06-14
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errMattner, Jochen; Mohammed, Javid P.; Fusakio, Michael E.; Giessler, Claudia; Hackstein, Carl-Philipp; Opoka, Robert; Wrage, Marius; Schey, Regina; Clark, Jan; Fraser, Heather I.; Rainbow, Daniel B.; Wicker, Linda S.
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A Novel Pkhd1 Mutation Interacts with the Nonobese Diabetic Genetic Background To Cause Autoimmune Cholangitis
err2018-01-01
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errHuang, Wenting; Rainbow, Daniel B.; Wu, Yuehong; Adams, David; Shivakumar, Pranavkumar; Kottyan, Leah; Karns, Rebekah; Aronow, Bruce; Bezerra, Jorge; Gershwin, M. Eric; Peterson, Laurence B.; Wicker, Linda S.; Ridgway, William M.
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Cells with Treg-specific &ITFOXP3&IT demethylation but low CD25 are prevalent in autoimmunity
err2017-11-01
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errFerreira, Ricardo C.; Simons, Henry Z.; Thompson, Whitney S.; Rainbow, Daniel B.; Yang, Xin; Cutler, Antony J.; Oliveira, Joao; Dopico, Xaquin Castro; Smyth, Deborah J.; Savinykh, Natalia; Mashar, Meghavi; Vyse, Tim J.; Dunge, David B.; Baxendale, Helen; Chandra, Anita; Wallace, Chris; Todd, John A.; Wicker, Linda S.; Pekalski, Marcin L.
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Chromosome contacts in activated T cells identify autoimmune disease candidate genes
err2017-09-04
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errBurren, Oliver S.; Garcia, Arcadio Rubio; Javierre, Biola-Maria; Rainbow, Daniel B.; Cairns, Jonathan; Cooper, Nicholas J.; Lambourne, John J.; Schofield, Ellen; Dopico, Xaquin Castro; Ferreira, Ricardo C.; Coulson, Richard; Burden, Frances; Rowlston, Sophia P.; Downes, Kate; Wingett, Steven W.; Frontini, Mattia; Ouwehand, Willem H.; Fraser, Peter; Spivakov, Mikhail; Todd, John A.; Wicker, Linda S.; Cutler, Antony J.; Wallace, Chris
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Neonatal and adult recent thymic emigrants produce IL-8 and express complement receptors CR1 and CR2
err2017-08-17
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errPekalski, Marcin L.; Garcia, Arcadio Rubio; Ferreira, Ricardo C.; Rainbow, Daniel B.; Smyth, Deborah J.; Mashar, Meghavi; Brady, Jane; Savinykh, Natalia; Dopico, Xaquin Castro; Mahmood, Sumiyya; Duley, Simon; Stevens, Helen E.; Walker, Neil M.; Cutler, Antony J.; Waldron-Lynch, Frank; Dunger, David B.; Shannon-Lowe, Claire; Coles, Alasdair J.; Jones, Joanne L.; Wallace, Chris; Todd, John A.; Wicker, Linda S.
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Ptpn22 and Cd2 Variations Are Associated with Altered Protein Expression and Susceptibility to Type 1 Diabetes in Nonobese Diabetic Mice
err2015-11-15
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errFraser, Heather I.; Howlett, Sarah; Clark, Jan; Rainbow, Daniel B.; Stanford, Stephanie M.; Wu, Dennis J.; Hsieh, Yi-Wen; Maine, Christian J.; Christensen, Mikkel; Kuchroo, Vijay; Sherman, Linda A.; Podolin, Patricia L.; Todd, John A.; Steward, Charles A.; Peterson, Laurence B.; Bottini, Nunzio; Wicker, Linda S.
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Genome-Wide Transcriptional Analyses of Islet-Specific CD4+ T Cells Identify Idd9 Genes Controlling Diabetogenic T Cell Function
err2015-03-15
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errBerry, Gregory J.; Frielle, Christine; Luu, Thaiphi; Salzberg, Anna C.; Rainbow, Daniel B.; Wicker, Linda S.; Waldner, Hanspeter
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Investigation of Soluble and Transmembrane CTLA-4 Isoforms in Serum and Microvesicles
err2014-07-15
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errEsposito, Laura; Hunter, Kara M. D.; Clark, Jan; Rainbow, Daniel B.; Stevens, Helen; Denesha, Jennifer; Duley, Simon; Dawson, Sarah; Coleman, Gillian; Nutland, Sarah; Bell, Gwynneth L.; Moran, Carla; Pekalski, Marcin; Todd, John A.; Wicker, Linda S.
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Genetic Interactions among Idd3, Idd5.1, Idd5.2, and Idd5.3 Protective Loci in the Nonobese Diabetic Mouse Model of Type 1 Diabetes
err2013-04-01
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errLin, Xiaotian; Hamilton-Williams, Emma E.; Rainbow, Daniel B.; Hunter, Kara M.; Dai, Yang D.; Cheung, Jocelyn; Peterson, Laurence B.; Wicker, Linda S.; Sherman, Linda A.
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The B10 Idd9.3 Locus Mediates Accumulation of Functionally Superior CD137+ Regulatory T Cells in the Nonobese Diabetic Type 1 Diabetes Model
err2012-11-15
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errKachapati, Kritika; Adams, David E.; Wu, Yuehong; Steward, Charles A.; Rainbow, Daniel B.; Wicker, Linda S.; Mittler, Robert S.; Ridgway, William M.
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Overexpression of the CTLA-4 Isoform Lacking Exons 2 and 3 Causes Autoimmunity
err2012-01-01
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errLiu, Sue M.; Sutherland, Andrew P. R.; Zhang, Zheng; Rainbow, Daniel B.; Quintana, Francisco J.; Paterson, Alison M.; Sharpe, Arlene H.; Oukka, Mohamed; Wicker, Linda S.; Kuchroo, Vijay K.
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Cellular Mechanisms of Restored a-Cell Tolerance Mediated by Protective Alleles of Idd3 and Idd5
err2011-12-12
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errHamilton-Williams, Emma E.; Cheung, Jocelyn; Rainbow, Daniel B.; Hunter, Kara M.; Wicker, Linda S.; Sherman, Linda A.
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