logo
CanyamAI summaries for academic research
language
MobileMobile
  • Phone FeatureWeChat Mini Program
EnglishEnglish
noticeNotice
BlogBlog
delete
arrow
Back
P

Pengyu Hong

brandeis university

32H-index
160Paper Count
3.6KCitation Count
Published Papers 42
Publication Date
logo
A systematic evaluation framework for universal antibody-antigen binding affinity prediction and candidate recommendation
erriScience
IF4.1
err2026-07-24
err0
errOAAI
errYunrui Li; Yue Zhao; Kemal Sonmez; Luca Giancardo; Lan Guo; Pengyu Hong; Nina Cheng; Melih Yilmaz
errShare
errSave
Cycling molecular assemblies for Golgi imaging and disruption
errNature Communications
IF15.7
err2026-01-28
err0
errOAAI
errWeiyi Tan; Qiuxin Zhang; Zhiyu Liu; Kangqiang Qiu; Divyanshu Mahajan; Thomas Gerton; Noah Copperman; Erica C. Dresselhaus; Chaoshuang Xia; Cheng Lin; William Lau; Mikki Lee; Isabela Ashton-Rickardt; Pengyu Hong; Daniela Dinulescu; Jer-Tsong Hsieh; Avital A. Rodal; David M. Loeb; Ronny Drapkin; Jiajie Diao; Lei Lu; Bing Xu
errShare
errSave
Testing and evaluation of generative large language models in electronic health record applications: a systematic review
errJournal of the American Medical Informatics Association
IF4.6
err2026-01-01
err7
PREAI
errDu, Xinsong; Zhou, Zhengyang; Wang, Yifei; Chuang, Ya-Wen; Li, Yiming; Yang, Richard; Zhang, Wenyu; Wang, Xinyi; Chen, Xinyu; Guan, Hao; Lian, John; Hong, Pengyu; Bates, David W.; Zhou, Li
errShare
errSave
Ai-assisted literature screening: A hybrid approach using large language models and retrieval-augmented generation
errInternational Journal of Medical Informatics
IF4.1
err2025-11-24
err0
PREAI
errYiming Li; Xinsong Du; Yifei Wang; Xinyu Chen; Zhengyang Zhou; John Lian; Ya-Wen Chuang; Pengyu Hong; Peter C. Hou; Li Zhou
errShare
errSave
Performance and improvement strategies for adapting generative large language models for electronic health record applications: A systematic review
errInternational Journal of Medical Informatics
IF4.1
err2025-08-28
err0
PREAI
errXinsong Du; Zhengyang Zhou; Yifei Wang; Ya-Wen Chuang; Yiming Li; Richard Yang; Pengyu Hong; David W. Bates; Li Zhou
errShare
errSave
Multimodal fusion with relational learning for molecular property prediction
errCommunications Chemistry
IF6.2
err2025-07-05
err0
errOAAI
errZhengyang Zhou; Yunrui Li; Pengyu Hong; Hao Xu
errShare
errSave
Advancing Drug Discovery with Enhanced Chemical Understanding via Asymmetric Contrastive Multimodal Learning
errJournal of Chemical Information and Modeling
IF5.3
err2025-06-23
err0
errOAAI
errYifei Wang; Yunrui Li; Lin Liu; Pengyu Hong; Hao Xu
errShare
errSave
TransPeakNet for solvent-aware 2D NMR prediction via multi-task pre-training and unsupervised learning
errCOMMUNICATIONS CHEMISTRY
IF6.2
err2025-02-20
err0
errOAAI
errLi, Yunrui; Xu, Hao; Kumar, Ambrish; Wang, Duo-Sheng; Heiss, Christian; Azadi, Parastoo; Hong, Pengyu
errShare
errSave
Glycan mixture analysis by kernel component composition for matrix factorization
errANALYTICAL AND BIOANALYTICAL CHEMISTRY
IF3.8
err2025-02-12
err0
PREAI
errHong, Pengyu; Xia, Chaoshuang; Tang, Yang; Wei, Juan; Lin, Cheng
errShare
errSave
Assessing fairness in machine learning models: A study of racial bias using matched counterparts in mortality prediction for patients with chronic diseases
errJOURNAL OF BIOMEDICAL INFORMATICS
IF4.5
err2024-08-01
err4
PREAI
errWang, Yifei; Wang, Liqin; Zhou, Zhengyang; Laurentiev, John; Lakin, Joshua R.; Zhou, Li; Hong, Pengyu
errShare
errSave
Graph-Graph Similarity Network
errIEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS
IF8.9
err2024-07-01
err1
PREAI
errYue, Han; Hong, Pengyu; Liu, Hongfu
errShare
errSave
Predicting the stereoselectivity of chemical reactions by composite machine learning method
errSCIENTIFIC REPORTS
IF3.9
err2024-05-27
err0
errOAAI
errChung, Jihoon; Li, Justin; Saimon, Amirul Islam; Hong, Pengyu; Kong, Zhenyu
errShare
errSave
Toward Automatic Inference of Glycan Linkages Using MS n and Machine Learning-Proof of Concept Using Sialic Acid Linkages
errJOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
IF2.7
err2023-08-24
err2
errOAAI
errNi, Xinyi; Murray, Nathan B.; Archer-Hartmann, Stephanie; Pepi, Lauren E.; Helm, Richard F.; Azadi, Parastoo; Hong, Pengyu
errShare
errSave
Motif-Based Graph Representation Learning with Application to Chemical Molecules
errINFORMATICS-BASEL
IF2.8
err2023-01-11
err4
errOAAI
errWang, Yifei; Chen, Shiyang; Chen, Guobin; Shurberg, Ethan; Liu, Hang; Hong, Pengyu
errShare
errSave
De novo glycan sequencing by electronic excitation dissociation MS2-guided MS3 analysis on an Omnitrap-Orbitrap hybrid instrument
errCHEMICAL SCIENCE
IF7.4
err2023-01-01
err5
errOAAI
errWei, Juan; Papanastasiou, Dimitris; Kosmopoulou, Mariangela; Smyrnakis, Athanasios; Hong, Pengyu; Tursumamat, Nafisa; Klein, Joshua A. A.; Xia, Chaoshuang; Tang, Yang; Zaia, Joseph; Costello, Catherine E. E.; Lin, Cheng
errShare
errSave
Identification of thermogenesis-related lncRNAs in small extracellular vesicles derived from adipose tissue
errBMC GENOMICS
IF3.7
err2022-09-19
err8
errOAAI
errHong, Pengyu; Wu, Yue; Zhang, Qi; Liu, Pan; Zhang, Siyuan; Yu, Mei; Tian, Weidong
errShare
errSave
Knowledgebra: An Algebraic Learning Framework for Knowledge Graph
errMACHINE LEARNING AND KNOWLEDGE EXTRACTION
IF6
err2022-05-05
err2
errOAAI
errYang, Tong; Wang, Yifei; Sha, Long; Engelbrecht, Jan; Hong, Pengyu
errShare
errSave
Enzyme-Responsive Peptide Thioesters for Targeting Golgi Apparatus
errJOURNAL OF THE AMERICAN CHEMICAL SOCIETY
IF15.6
err2022-04-11
err56
errOAAI
errTan, Weiyi; Zhang, Qiuxin; Quinones-Frias, Monica C.; Hsu, Alan Y.; Zhang, Yichi; Rodal, Avital; Hong, Pengyu; Luo, Hongbo R.; Xu, Bing
errShare
errSave
A Self-Assembling Probe for Imaging the States of Golgi Apparatus in Live Single Cells
errBIOCONJUGATE CHEMISTRY
IF3.9
err2022-03-21
err8
errOAAI
errTan, Weiyi; Zhang, Qiuxin; Hong, Pengyu; Xu, Bing
errShare
errSave
GlycoDeNovo2: An Improved MS/MS-Based De Novo Glycan Topology Reconstruction Algorithm
errJOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
IF2.7
err2022-02-14
err4
errOAAI
errChen, Zizhang; Wei, Juan; Tang, Yang; Lin, Cheng; Costello, Catherine E.; Hong, Pengyu
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
L
Lewis C. Cantley
H-index: 214 · Papers: 1.4K
G
Gregory J. Hannon
H-index: 168 · Papers: 495
N
Norbert Perrimon
H-index: 154 · Papers: 867
J
Jeffrey A. Engelman
H-index: 131 · Papers: 874
C
Christopher A. Walsh
H-index: 122 · Papers: 576
View more