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Attila Gábor

Ruprecht Karls University Heidelberg

18H-index
53Paper Count
1.8KCitation Count
Published Papers 15
Publication Date
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OmniPath: integrated knowledgebase for multi-omics analysis
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-11-01
err1
errOAAI
errTurei, Denes; Schaul, Jonathan; Palacio-Escat, Nicolas; Bohar, Balazs; Bai, Yunfan; Ceccarelli, Francesco; Cevrim, Elif; Daley, Macabe; Darcan, Melih; Dimitrov, Daniel; Dogan, Tunca; Domingo-Fernandez, Daniel; Dugourd, Aurelien; Gabor, Attila; Gul, Lejla; Hall, Benjamin A.; Hoyt, Charles Tapley; Ivanova, Olga; Klein, Michal; Lawrence, Toby; Mananes, Diego; Modos, Dezso; Muller-Dott, Sophia; Olbei, Marton; Schmidt, Christina; Sen, Bunyamin; Theis, Fabian J.; Unlu, Atabey; Ulusoy, Erva; Valdeolivas, Alberto; Korcsmaros, Tamas; Saez-Rodriguez, Julio
errShare
errSave
Quantitative systems toxicology: modelling to mechanistically understand and predict drug safety
errNature Reviews Drug Discovery
IF101.8
err2025-10-27
err0
PREAI
errChristopher E. Goldring; Giusy Russomanno; Carmen Pin; Panuwat Trairatphisan; Kylie A. Beattie; Ciarán P. Fisher; Janet Piñero; Richard J. Brennan; Diana Clausznitzer; Ian M. Copple; Theo M. de Kok; Carrie A. Duckworth; Laura I. Furlong; Barbara Füzi; Attila Gabor; Louis Gall; Jan Hengstler; Henning Hermjakob; Fiona Hunter; Danyel Jennen; Mikko Koskinen; Steven J. Kunnen; Lieve Lammens; Sebastian Lobentanzer; Marcel Mohr; Elisa Passini; D. Mark Pritchard; Rahuman S. Malik-Sheriff; Blanca Rodríguez; Eric I. Rossman; Julio Saez-Rodríguez; Friedemann Schmidt; Rowena Sison-Young; Inari Soininen; Sean Turner; Bob van de Water; Johan G. C. van Hasselt; Filippo Venezia; Jeffrey A. Willy; Derek J. Leishman; James L. Stevens; Loic Laplanche
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errSave
Unifying multi-sample network inference from prior knowledge and omics data with CORNETO
errNature Machine Intelligence
IF23.9
err2025-07-22
err0
errOAAI
errPablo Rodriguez-Mier; Martin Garrido-Rodriguez; Attila Gabor; Julio Saez-Rodriguez
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errSave
Assessing the impact of transcriptomics data analysis pipelines on downstream functional enrichment results
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-06-29
err0
errOAAI
errPaton, Victor; Ramirez Flores, Ricardo Omar; Gabor, Attila; Badia-i-Mompel, Pau; Tanevski, Jovan; Garrido-Rodriguez, Martin; Saez-Rodriguez, Julio
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errSave
A network-based transcriptomic landscape of HepG2 cells uncovering causal gene-cytotoxicity interactions underlying drug-induced liver injury
errTOXICOLOGICAL SCIENCES
IF4.1
err2023-11-28
err4
errOAAI
errWijaya, Lukas S.; Gabor, Attila; Pot, Iris E.; van de Have, Luca; Saez-Rodriguez, Julio; Stevens, James L.; Le Devedec, Sylvia E.; Callegaro, Giulia; van de Water, Bob
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errSave
Parallel ant colony optimization for the training of cell signaling networks
errEXPERT SYSTEMS WITH APPLICATIONS
IF7.5
err2022-12-01
err3
errOAAI
errGonzalez, Patricia; Prado-Rodriguez, Roberto; Gabor, Attila; Saez-Rodriguez, Julio; Banga, Julio R.; Doallo, Ramon
errShare
errSave
Explainable multiview framework for dissecting spatial relationships from highly multiplexed data
errGENOME BIOLOGY
IF9.4
err2022-04-14
err71
errOAAI
errTanevski, Jovan; Flores, Ricardo Omar Ramirez; Gabor, Attila; Schapiro, Denis; Saez-Rodriguez, Julio
errShare
errSave
Cell-to-cell and type-to-type heterogeneity of signaling networks: insights from the crowd
errMOLECULAR SYSTEMS BIOLOGY
IF7.7
err2021-10-18
err10
errOAAI
errGabor, Attila; Tognetti, Marco; Driessen, Alice; Tanevski, Jovan; Guo, Baosen; Cao, Wencai; Shen, He; Yu, Thomas; Chung, Verena; Bodenmiller, Bernd; Saez-Rodriguez, Julio
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errSave
Integration of temporal single cell cellular stress response activity with logic-ODE modeling reveals activation of ATF4-CHOP axis as a critical predictor of drug-induced liver injury
errBIOCHEMICAL PHARMACOLOGY
IF5.6
err2021-08-01
err15
errOAAI
errWijaya, Lukas Surya; Trairatphisan, Panuwat; Gabor, Attila; Niemeijer, Marije; Keet, Jason; Morera, Ariadna Alcala; Snijders, Kirsten E.; Wink, Steven; Yang, Huan; Schildknecht, Stefan; Stevens, James L.; Bouwman, Peter; Kamp, Hennicke; Hengstler, Jan; Beltman, Joost; Leist, Marcel; Le Devedec, Sylvia; Saez-Rodriguez, Julio; van de Water, Bob
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errSave
New insights into the mechanisms underlying 5-fluorouracil-induced intestinal toxicity based on transcriptomic and metabolomic responses in human intestinal organoids
errARCHIVES OF TOXICOLOGY
IF6.9
err2021-06-20
err27
errOAAI
errRodrigues, Daniela; de Souza, Terezinha; Coyle, Luke; Di Piazza, Matteo; Herpers, Bram; Ferreira, Sofia; Zhang, Mian; Vappiani, Johanna; Sevin, Daniel C.; Gabor, Attila; Lynch, Anthony; Chung, Seung-Wook; Saez-Rodriguez, Julio; Jennen, Danyel G. J.; Kleinjans, Jos C. S.; de Kok, Theo M.
errShare
errSave
Deciphering the signaling network of breast cancer improves drug sensitivity prediction
errCELL SYSTEMS
IF7.7
err2021-05-01
err29
errOAAI
errTognetti, Marco; Gabor, Attila; Yang, Mi; Cappelletti, Valentina; Windhager, Jonas; Rueda, Oscar M.; Charmpi, Konstantina; Esmaeilishirazifard, Elham; Bruna, Alejandra; de Souza, Natalie; Caldas, Carlos; Beyer, Andreas; Picotti, Paola; Saez-Rodriguez, Julio; Bodenmiller, Bernd
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errSave
Integrated intra- and intercellular signaling knowledge for multicellular omics analysis
errMOLECULAR SYSTEMS BIOLOGY
IF7.7
err2021-03-22
err141
errOAAI
errTuerei, Denes; Valdeolivas, Alberto; Gul, Lejla; Palacio-Escat, Nicolas; Klein, Michal; Ivanova, Olga; Oelbei, Marton; Gabor, Attila; Theis, Fabian; Korcsmaros, Tamas; Saez-Rodriguez, Julio
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errSave
Causal integration of multi-omics data with prior knowledge to generate mechanistic hypotheses
errMOLECULAR SYSTEMS BIOLOGY
IF7.7
err2021-01-27
err86
errOAAI
errDugourd, Aurelien; Kuppe, Christoph; Sciacovelli, Marco; Gjerga, Enio; Gabor, Attila; Emdal, Kristina B.; Vieira, Vitor; Bekker-Jensen, Dorte B.; Kranz, Jennifer; Bindels, Eric. M. J.; Costa, Ana S. H.; Sousa, Abel; Beltrao, Pedro; Rocha, Miguel; Olsen, Jesper V.; Frezza, Christian; Kramann, Rafael; Saez-Rodriguez, Julio
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errSave
Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data
errLIFE SCIENCE ALLIANCE
IF2.9
err2020-09-24
err17
errOAAI
errTanevski, Jovan; Thin Nguyen; Truong, Buu; Karaiskos, Nikos; Ahsen, Mehmet Eren; Zhang, Xinyu; Chang Shu; Ke Xu; Liang, Xiaoyu; Ying Hu; Pham, Hoang V. V.; Li Xiaomei; Le, Thuc D.; Tarca, Adi L.; Bhatti, Gaurav; Romero, Roberto; Karathanasis, Nestoras; Loher, Phillipe; Yang Chen; Ouyang, Zhengqing; Mao, Disheng; Zhang, Yuping; Zand, Maryam; Ruan, Jianhua; Hafemeister, Christoph; Peng Qiu; Duc Tran; Tin Nguyen; Gabor, Attila; Yu, Thomas; Guinney, Justin; Glaab, Enrico; Krause, Roland; Banda, Peter; Stolovitzky, Gustavo; Rajewsky, Nikolaus; Saez-Rodriguez, Julio; Meyer, Pablo
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errSave
Analysis of the Human Kinome and Phosphatome by Mass Cytometry Reveals Overexpression-Induced Effects on Cancer-Related Signaling
errMOLECULAR CELL
IF16.6
err2019-06-01
err34
errOAAI
errLun, Xiao-Kang; Szklarczyk, Damian; Gabor, Attila; Dobberstein, Nadine; Zanotelli, Vito Riccardo Tomaso; Saez-Rodriguez, Julio; von Mering, Christian; Bodenmiller, Bernd
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
R
Roberto Romero
H-index: 181 · Papers: 2.3K
C
Carlos Caldas
H-index: 158 · Papers: 1.4K
F
Fabian J. Theis
H-index: 125 · Papers: 1.1K
J
Jesper V. Olsen
H-index: 103 · Papers: 658
C
Christian von Mering
H-index: 100 · Papers: 271
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