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The STRING database in 2025: protein networks with directionality of regulation Szklarczyk, Damian; Nastou, Katerina; Koutrouli, Mikaela; Kirsch, Rebecca; Mehryary, Farrokh; Hachilif, Radja; Hu, Dewei; Peluso, Matteo E.; Huang, Qingyao; Fang, Tao; Doncheva, Nadezhda T.; Pyysalo, Sampo; Bork, Peer; Jensen, Lars J.; von Mering, Christian Share Save
BGC Atlas: a web resource for exploring the global chemical diversity encoded in bacterial genomes Bagci, Caner; Nuhamunada, Matin; Goyat, Hemant; Ladanyi, Casimir; Sehnal, Ludek; Blin, Kai; Kautsar, Satria A.; Tagirdzhanov, Azat; Gurevich, Alexey; Mantri, Shrikant; von Mering, Christian; Udwary, Daniel; Medema, Marnix H.; Weber, Tilmann; Ziemert, Nadine Share Save
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The SIB Swiss Institute of Bioinformatics Semantic Web of data Altenhoff, Adrian; Bairoch, Amos; Bansal, Parit; Baratin, Delphine; Bastian, Frederic; Bolleman, Jerven; Bridge, Alan; Burdet, Frederic; Crameri, Katrin; Dauvillier, Jerome; Dessimoz, Christophe; Gehant, Sebastien; Glover, Natasha; Gnodtke, Kristin; Hayes, Catherine; Ibberson, Mark; Kriventseva, Evgenia; Kuznetsov, Dmitry; Lisacek, Frederique; Mehl, Florence; de Farias, Tarcisio Mendes; Michel, Pierre-Andre; Moretti, Sebastien; Morgat, Anne; Osterle, Sabine; Pagni, Marco; Redaschi, Nicole; Robinson-Rechavi, Marc; Samarasinghe, Kasun; Sima, Ana-Claudia; Szklarczyk, Damian; Topalov, Orlin; Toure, Vasundra; Unni, Deepak; von Mering, Christian; Wollbrett, Julien; Zahn-Zabal, Monique; Zdobnov, Evgeny Share Save
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Pathway and network analysis of more than 2500 whole cancer genomes (vol 11, 729, 2020) Reyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Dhingra, Priyanka; Shrestha, Raunak; Getz, Gad; Lawrence, Michael S.; Pedersen, Jakob Skou; Rubin, Mark A.; Wheeler, David A.; Brunak, Sren; Izarzugaza, Jose M. G.; Khurana, Ekta; Marchal, Kathleen; von Mering, Christian; Sahinalp, S. Cenk; Valencia, Alfonso; Reimand, Jueri; Stuart, Joshua M.; Raphael, Benjamin J. Share Save
proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes Fullam, Anthony; Letunic, Ivica; Schmidt, Thomas S. B.; Ducarmon, Quinten R.; Karcher, Nicolai; Khedkar, Supriya; Kuhn, Michael; Larralde, Martin; Maistrenko, Oleksandr M.; Malfertheiner, Lukas; Milanese, Alessio; Rodrigues, Joao Frederico Matias; Sanchis-Lopez, Claudia; Schudoma, Christian; Szklarczyk, Damian; Sunagawa, Shinichi; Zeller, Georg; Huerta-Cepas, Jaime; von Mering, Christian; Bork, Peer; Mende, Daniel R. Share Save
eggNOG 6.0: enabling comparative genomics across 12 535 organisms Hernandez-Plaza, Ana; Szklarczyk, Damian; Botas, Jorge; Cantalapiedra, Carlos P.; Giner-Lamia, Joaquin; Mende, Daniel R.; Kirsch, Rebecca; Rattei, Thomas; Letunic, Ivica; Jensen, Lars J.; Bork, Peer; von Mering, Christian; Huerta-Cepas, Jaime Share Save
The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest Szklarczyk, Damian; Kirsch, Rebecca; Koutrouli, Mikaela; Nastou, Katerina; Mehryary, Farrokh; Hachilif, Radja; Gable, Annika L.; Fang, Tao; Doncheva, Nadezhda T.; Pyysalo, Sampo; Bork, Peer; Jensen, Lars J.; von Mering, Christian Share Save
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Sequence-Specific Features of Short Double-Strand, Blunt-End RNAs Have RIG-I- and Type 1 Interferon-Dependent or -Independent Anti-Viral Effects Kannan, Abhilash; Suomalainen, Maarit; Volle, Romain; Bauer, Michael; Amsler, Marco; Trinh, Hung, V; Vavassori, Stefano; Schmid, Jana Pachlopnik; Vilhena, Guilherme; Marin-Gonzalez, Alberto; Perez, Ruben; Franceschini, Andrea; von Mering, Christian; Hemmi, Silvio; Greber, Urs F. Share Save
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