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C

Chia‐Ru Chung

bruker corporation

20H-index
84Paper Count
1.4KCitation Count
Published Papers 35
Publication Date
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DeepOTG: An effective deep learning framework for identifying human protein O-linked threonine glycosylation sites via attention-based information bottleneck
errInternational Journal of Biological Macromolecules
IF8.5
err2026-04-21
err0
PREAI
errYujing Ye; Peilin Xie; Chia-Ru Chung; Feng Wang; Bowen Shi; Xingqiao Lin; Yen-Peng Chiu; Tzong-Yi Lee; Xiangrong Liu; Jiahui Guan; Lantian Yao
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AI-powered rapid detection of multidrug-resistant Klebsiella pneumoniae with informative peaks of MALDI-TOF MS
errBioinformatics Advances
IF2.8
err2026-01-01
err1
errOAAI
errLu, Jang-Jih; Chung, Chia-Ru; Wang, Hsin-Yao; Tang, Yun; Chiang, Ming-Chien; Wu, Li-Ching; Hsu, Justin Bo-Kai; Lee, Tzong-Yi; Horng, Jorng-Tzong
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ConsAMPHemo: A computational framework for predicting hemolysis of antimicrobial peptides based on machine learning approaches
errProtein Science
IF5.2
err2025-06-16
err0
PREAI
errPeilin Xie; Lantian Yao; Jiahui Guan; Chia-Ru Chung; Zhihao Zhao; Feiyu Long; Zhenglong Sun; Tzong-Yi Lee; Ying-Chih Chiang
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Mobile Virtual Assistant for Multi-Modal Depression-Level Stratification
errIEEE Transactions on Affective Computing
IF9.8
err2025-04-01
err0
PREAI
errEric Hsiao-Kuang Wu; Ting-Yu Gao; Chia-Ru Chung; Chun-Chuan Chen; Chia-Fen Tsai; Shih-Ching Yeh
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errSave
Caps-ac4C: An effective computational framework for identifying N4-acetylcytidine sites in human mRNA based on deep learning
errJOURNAL OF MOLECULAR BIOLOGY
IF4.5
err2025-01-01
err0
PREAI
errYao, Lantian; Xie, Peilin; Dong, Danhong; Guo, Yilin; Guan, Jiahui; Zhang, Wenyang; Chung, Chia-Ru; Zhao, Zhihao
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errSave
dbAMP 3.0: updated resource of antimicrobial activity and structural annotation of peptides in the post-pandemic era
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-11-14
err0
errOAAI
errYao, Lantian; Guan, Jiahui; Xie, Peilin; Chung, Chia-Ru; Zhao, Zhihao; Dong, Danhong; Guo, Yilin; Zhang, Wenyang; Deng, Junyang; Pang, Yuxuan; Liu, Yulan; Peng, Yunlu; Horng, Jorng-Tzong; Chiang, Ying-Chih; Lee, Tzong-Yi
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dbPTM 2025 update: comprehensive integration of PTMs and proteomic data for advanced insights into cancer research
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-11-11
err0
errOAAI
errChung, Chia-Ru; Tang, Yun; Chiu, Yen-Peng; Li, Shangfu; Hsieh, Wen-Kai; Yao, Lantian; Chiang, Ying-Chih; Pang, Yuxuan; Chen, Guan-Ting; Chou, Kai-Chen; Paik, You Sheng; Tran, Phuong Lam; Lin, Cheng-Pei; Kao, Yu-Min; Chen, Yi-Jie; Chang, Wen-Chi; Hsu, Justin Bo-Kai; Horng, Jorng-Tzong; Lee, Tzong-Yi
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ACP-CapsPred: an explainable computational framework for identification and functional prediction of anticancer peptides based on capsule network
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-09-18
err1
errOAAI
errYao, Lantian; Xie, Peilin; Guan, Jiahui; Chung, Chia-Ru; Zhang, Wenyang; Deng, Junyang; Huang, Yixian; Chiang, Ying-Chih; Lee, Tzong-Yi
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CapsEnhancer: An Effective Computational Framework for Identifying Enhancers Based on Chaos Game Representation and Capsule Network
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2024-07-01
err1
errOAAI
errYao, Lantian; Xie, Peilin; Guan, Jiahui; Chung, Chia-Ru; Huang, Yixian; Pang, Yuxuan; Wu, Huacong; Chiang, Ying-Chih; Lee, Tzong-Yi
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A two-stage computational framework for identifying antiviral peptides and their functional types based on contrastive learning and multi-feature fusion strategy
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-05-05
err7
errOAAI
errGuan, Jiahui; Yao, Lantian; Xie, Peilin; Chung, Chia-Ru; Huang, Yixian; Chiang, Ying-Chih; Lee, Tzong-Yi
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errSave
Identifying Antitubercular Peptides via Deep Forest Architecture with Effective Feature Representation
errANALYTICAL CHEMISTRY
IF6.7
err2024-01-16
err1
PREAI
errYao, Lantian; Guan, Jiahui; Li, Wenshuo; Chung, Chia-Ru; Deng, Junyang; Chiang, Ying-Chih; Lee, Tzong-Yi
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errSave
Impaired Brain-Heart Relation in Patients With Methamphetamine Use Disorder During VR Induction of Drug Cue Reactivity
errIEEE JOURNAL OF TRANSLATIONAL ENGINEERING IN HEALTH AND MEDICINE
IF4.4
err2024-01-01
err1
errOAAI
errChen, Chun-Chuan; Chung, Chia-Ru; Tsai, Meng-Chang; Wu, Eric Hsiao-Kuang; Chiu, Po-Ru; Tsai, Po-Yi; Yeh, Shih-Ching
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errSave
Predicting Anti-inflammatory Peptides by Ensemble Machine Learning and Deep Learning
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2023-12-06
err11
PREAI
errGuan, Jiahui; Yao, Lantian; Chung, Chia-Ru; Xie, Peilin; Zhang, Yilun; Deng, Junyang; Chiang, Ying-Chih; Lee, Tzong-Yi
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errSave
Trend of HPV Molecular Epidemiology in the Post-Vaccine Era: A 10-Year Study
errVIRUSES-BASEL
IF3.5
err2023-09-27
err8
errOAAI
errLin, Yueh; Lin, Wan-Ying; Lin, Ting-Wei; Tseng, Yi-Ju; Wang, Yu-Chiang; Yu, Jia-Ruei; Chung, Chia-Ru; Wang, Hsin-Yao
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A risk assessment framework for multidrug-resistant Staphylococcus aureus using machine learning and mass spectrometry technology
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2023-09-22
err1
PREAI
errWang, Zhuo; Pang, Yuxuan; Chung, Chia-Ru; Wang, Hsin-Yao; Cui, Haiyan; Chiang, Ying-Chih; Horng, Jorng-Tzong; Lu, Jang-Jih; Lee, Tzong-Yi
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Data-Driven Two-Stage Framework for Identification and Characterization of Different Antibiotic-Resistant Escherichia coli Isolates Based on Mass Spectrometry Data
errMICROBIOLOGY SPECTRUM
IF3.8
err2023-06-15
err6
errOAAI
errChung, Chia-Ru; Wang, Hsin-Yao; Yao, Chun-Han; Wu, Li-Ching; Lu, Jang-Jih; Horng, Jorng-Tzong; Lee, Tzong-Yi
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errSave
Identification of species-specific RNA N6-methyladinosine modification sites from RNA sequences
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2023-01-28
err3
PREAI
errWang, Rulan; Chung, Chia-Ru; Huang, Hsien-Da; Lee, Tzong-Yi
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Rapid and Accurate Discrimination of Mycobacterium abscessus Subspecies Based on Matrix-Assisted Laser Desorption Ionization-Time of Flight Spectrum and Machine Learning Algorithms
errBIOMEDICINES
IF3.9
err2022-12-25
err8
errOAAI
errWang, Hsin-Yao; Kuo, Chi-Heng; Chung, Chia-Ru; Lin, Wan-Ying; Wang, Yu-Chiang; Lin, Ting-Wei; Yu, Jia-Ruei; Lu, Jang-Jih; Wu, Ting-Shu
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Neuronal Abnormalities Induced by an Intelligent Virtual Reality System for Methamphetamine Use Disorder
errIEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS
IF6.8
err2022-07-01
err9
PREAI
errChen, Chun-Chuan; Tsai, Meng-Chang; Wu, Eric Hsiao-Kuang; Chung, Chia-Ru; Lee, Yuchi; Chiu, Po-Ru; Tsai, Po-Yi; Sheng, Shao-Rong; Yeh, Shih-Ching
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Efficiently Predicting Vancomycin Resistance of Enterococcus Faecium From MALDI-TOF MS Spectra Using a Deep Learning-Based Approach
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2022-06-06
err17
errOAAI
errWang, Hsin-Yao; Hsieh, Tsung-Ting; Chung, Chia-Ru; Chang, Hung-Ching; Horng, Jorng-Tzong; Lu, Jang-Jih; Huang, Jia-Hsin
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Research Directions

No research directions
Co-authors
Cooperation Journals
Y
Yhu‐Chering Huang
H-index: 61 · Papers: 415
C
Chun‐Hsien Chen
H-index: 53 · Papers: 338
T
Tzong-Yi Lee
H-index: 47 · Papers: 164
J
Jang‐Jih Lu
H-index: 45 · Papers: 334
M
Min‐Hsien Wu
H-index: 42 · Papers: 204
View more