arrow
Back
R

Roberto Vera Alvarez

omics informatics llc

17H-index
66Paper Count
3.3KCitation Count
Published Papers 16
Publication Date
HXMS: a standardized file format for HX-MS data
err2026-03-09
err0
errOAAI
errKyle C Weber; Chenlin Lu; Roberto Vera Alvarez; Bruce D Pascal; Anum Glasgow; null; null
errShare
errSave
Structural proteomics defines a sequential priming mechanism for the progesterone receptor
err2025-05-12
err0
errOAAI
errMann, Matthew D.; Wang, Min; Ferreon, Josephine C.; Tsoi, Phoebe S.; Suess, Michael P.; Jain, Antrix; Malovannaya, Anna; Alvarez, Roberto Vera; Pascal, Bruce D.; Kumar, Raj; Edwards, Dean P.; Griffin, Patrick R.
errShare
errSave
COG database update 2024
err2024-11-04
err1
errOAAI
errGalperin, Michael Y.; Alvarez, Roberto Vera; Karamycheva, Svetlana; Makarova, Kira S.; Wolf, Yuri, I; Landsman, David; Koonin, Eugene, V
errShare
errSave
errShare
errSave
BioContainers Registry: Searching Bioinformatics and Proteomics Tools, Packages, and Containers
err2021-02-24
err19
errOAAI
errBai, Jingwen; Bandla, Chakradhar; Guo, Jiaxin; Alvarez, Roberto Vera; Bai, Mingze; Vizcaino, Juan Antonio; Moreno, Pablo; Gruening, Bjoern; Sallou, Olivier; Perez-Riverol, Yasset
errShare
errSave
Transcriptome annotation in the cloud: complexity, best practices, and cost
err2021-01-29
err6
errOAAI
errAlvarez, Roberto Vera; Marino-Ramirez, Leonardo; Landsman, David
errShare
errSave
PM4NGS, a project management framework for next-generation sequencing data analysis
err2021-01-07
err0
errOAAI
errAlvarez, Roberto Vera; Pongor, Lorinc; Marino-Ramirez, Leonardo; Landsman, David
errShare
errSave
COG database update: focus on microbial diversity, model organisms, and widespread pathogens
err2020-11-09
err466
errOAAI
errGalperin, Michael Y.; Wolf, Yuri, I; Makarova, Kira S.; Alvarez, Roberto Vera; Landsman, David; Koonin, Eugene, V
errShare
errSave
BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks
err2020-04-22
err37
errOAAI
errPongor, Lorinc S.; Gross, Jacob M.; Vera Alvarez, Roberto; Murai, Junko; Jang, Sang-Min; Zhang, Hongliang; Redon, Christophe; Fu, Haiqing; Huang, Shar-Yin; Thakur, Bhushan; Baris, Adrian; Marino-Ramirez, Leonardo; Landsman, David; Aladjem, Mirit I.; Pommier, Yves
errShare
errSave
Banana (Musa acuminata) transcriptome profiling in response to rhizobacteria: Bacillus amyloliquefaciens Bs006 and Pseudomonas fluorescens Ps006
err2019-05-14
err36
errOAAI
errGamez, Rocio M.; Rodriguez, Fernando; Vidal, Newton Medeiros; Ramirez, Sandra; Alvarez, Roberto Vera; Landsman, David; Marino-Ramirez, Leonardo
errShare
errSave
LitSense: making sense of biomedical literature at sentence level
err2019-04-25
err32
errOAAI
errAllot, Alexis; Chen, Qingyu; Kim, Sun; Alvarez, Roberto Vera; Comeau, Donald C.; Wilbur, W. John; Lu, Zhiyong
errShare
errSave
Quality of Life in long term premenopausic early stages breast cancer survivors. QL determinants.
err2018-04-01
err0
errOAAI
errArraras, J. I.; Manterola, A.; Illarramendi, J. J.; Asin, G.; Salgado, E.; De la Cruz, S.; Ibanez, B.; Vera, R.; Dominguez, M. A.
errShare
errSave
Workflow and web application for annotating NCBI BioProject transcriptome data
err2017-04-17
err4
errOAAI
errAlvarez, Roberto Vera; Vidal, Newton Medeiros; Garzon-Martinez, Gina A.; Barrero, Luz S.; Landsman, David; Marino-Ramirez, Leonardo
errShare
errSave
Quantifying deleterious effects of regulatory variants
err2016-12-15
err12
errOAAI
errLi, Shan; Alvarez, Roberto Vera; Sharan, Roded; Landsman, David; Ovcharenko, Ivan
errShare
errSave
JBioWH: an open-source Java framework for bioinformatics data integration
err2013-07-11
err4
errOAAI
errVera, Roberto; Perez-Riverol, Yasset; Perez, Sonia; Ligeti, Balazs; Kertesz-Farkas, Attila; Pongor, Sandor
errShare
errSave
Evaluation of Phenylthiocarbamoyl-Derivatized Peptides by Electrospray Ionization Mass Spectrometry: Selective Isolation and Analysis of Modified Multiply Charged Peptides for Liquid Chromatography-Tandem Mass Spectrometry Experiments
err2010-09-20
err11
PREAI
errSanchez, Aniel; Perez-Riverol, Yasset; Javier Gonzalez, Luis; Noda, Jesus; Betancourt, Lazaro; Ramos, Yassel; Gil, Jeovanis; Vera, Roberto; Padron, Gabriel; Besada, Vladimir
errShare
errSave