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SaveAssessing Artificial Intelligence (AI) Implementation for Assisting Gene Linking (at the National Library of Medicine)
Islamaj, Rezarta; Huston, Melanie; Coss, Cathleen; Kochar, Preeti Gokal; Miliaras, Nicholas; Mork, James G.; Rodionov, Oleg; Sekiya, Keiko; Trinh, Dorothy; Whitman, Deborah; Wallin, Craig; Lu, Zhiyong Share Save The biomedical relationship corpus of the BioRED track at the BioCreative VIII challenge and workshopIslamaj, Rezarta; Wei, Chih-Hsuan; Lai, Po-Ting; Luo, Ling; Coss, Cathleen; Kochar, Preeti Gokal; Miliaras, Nicholas; Rodionov, Oleg; Sekiya, Keiko; Trinh, Dorothy; Whitman, Deborah; Lu, Zhiyong Share Save The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIIIIslamaj, Rezarta; Lai, Po-Ting; Wei, Chih-Hsuan; Luo, Ling; Almeida, Tiago; Jonker, Richard A. A.; Conceicao, Sofia I. R.; Sousa, Diana F.; Phan, Cong-Phuoc; Chiang, Jung-Hsien; Li, Jiru; Pan, Dinghao; Meesawad, Wilailack; Tsai, Richard Tzong-Han; Sarol, M. Janina; Hong, Gibong; Valiev, Airat; Tutubalina, Elena; Lee, Shao-Man; Hsu, Yi-Yu; Li, Mingjie; Verspoor, Karin; Lu, Zhiyong Share Save Opportunities and challenges for ChatGPT and large language models in biomedicine and healthTian, Shubo; Jin, Qiao; Yeganova, Lana; Lai, Po-Ting; Zhu, Qingqing; Chen, Xiuying; Yang, Yifan; Chen, Qingyu; Kim, Won; Comeau, Donald C.; Islamaj, Rezarta; Kapoor, Aadit; Gao, Xin; Lu, Zhiyong Share Save Chemical identification and indexing in full-text articles: an overview of the NLM-Chem track at BioCreative VIILeaman, Robert; Islamaj, Rezarta; Adams, Virginia; Alliheedi, Mohammed A.; Almeida, Joao Rafael; Antunes, Rui; Bevan, Robert; Chang, Yung-Chun; Erdengasileng, Arslan; Hodgskiss, Matthew; Ida, Ryuki; Kim, Hyunjae; Li, Keqiao; Mercer, Robert E.; Mertova, Lukrecia; Mobasher, Ghadeer; Shin, Hoo-Chang; Sung, Mujeen; Tsujimura, Tomoki; Yeh, Wen-Chao; Lu, Zhiyong Share Save Share Save NLM-Chem-BC7: manually annotated full-text resources for chemical entity annotation and indexing in biomedical articlesIslamaj, Rezarta; Leaman, Robert; Cissel, David; Coss, Cathleen; Denicola, Joseph; Fisher, Carol; Guzman, Rob; Kochar, Preeti Gokal; Miliaras, Nicholas; Punske, Zoe; Sekiya, Keiko; Trinh, Dorothy; Whitman, Deborah; Schmidt, Susan; Lu, Zhiyong Share Save Share Save Multi-label classification for biomedical literature: an overview of the BioCreative VII LitCovid Track for COVID-19 literature topic annotationsChen, Qingyu; Allot, Alexis; Leaman, Robert; Islamaj, Rezarta; Du, Jingcheng; Fang, Li; Wang, Kai; Xu, Shuo; Zhang, Yuefu; Bagherzadeh, Parsa; Bergler, Sabine; Bhatnagar, Aakash; Bhavsar, Nidhir; Chang, Yung-Chun; Lin, Sheng-Jie; Tang, Wentai; Zhang, Hongtong; Tavchioski, Ilija; Pollak, Senja; Tian, Shubo; Zhang, Jinfeng; Otmakhova, Yulia; Yepes, Antonio Jimeno; Dong, Hang; Wu, Honghan; Dufour, Richard; Labrak, Yanis; Chatterjee, Niladri; Tandon, Kushagri; Laleye, Frejus A. A.; Rakotoson, Loic; Chersoni, Emmanuele; Gu, Jinghang; Friedrich, Annemarie; Pujari, Subhash Chandra; Chizhikova, Mariia; Sivadasan, Naveen; Saipradeep, V. G.; Lu, Zhiyong Share Save Share Save NLM-Gene, a richly annotated gold standard dataset for gene entities that addresses ambiguity and multi-species gene recognitionIslamaj, Rezarta; Wei, Chih-Hsuan; Cissel, David; Miliaras, Nicholas; Printseva, Olga; Rodionov, Oleg; Sekiya, Keiko; Ward, Janice; Lu, Zhiyong Share Save Share Save Share Save Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicineDogan, Rezarta Islamaj; Kim, Sun; Chatr-aryamontri, Andrew; Wei, Chih-Hsuan; Comeau, Donald C.; Antunes, Rui; Matos, Sergio; Chen, Qingyu; Elangovan, Aparna; Panyam, Nagesh C.; Verspoor, Karin; Liu, Hongfang; Wang, Yanshan; Liu, Zhuang; Altinel, Berna; Husunbeyi, Zehra Melce; Ozgur, Arzucan; Fergadis, Aris; Wang, Chen-Kai; Dai, Hong-Jie; Tran, Tung; Kavuluru, Ramakanth; Luo, Ling; Steppi, Albert; Zhang, Jinfeng; Qu, Jinchan; Lu, Zhiyong Share Save The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactionsDogan, Rezarta Islamaj; Kim, Sun; Chatr-aryamontri, Andrew; Chang, Christie S.; Oughtred, Rose; Rust, Jennifer; Wilbur, W. John; Comeau, Donald C.; Dolinski, Kara; Tyers, Mike Share Save BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRIDKim, Sun; Dogan, Rezarta Islamaj; Chatr-Aryamontri, Andrew; Chang, Christie S.; Oughtred, Rose; Rust, Jennifer; Batista-Navarro, Riza; Carter, Jacob; Ananiadou, Sophia; Matos, Sergio; Santos, Andre; Campos, David; Oliveira, Jose Luis; Singh, Onkar; Jonnagaddala, Jitendra; Dai, Hong-Jie; Su, Emily Chia-Yu; Chang, Yung-Chun; Su, Yu-Chen; Chu, Chun-Han; Chen, Chien Chin; Hsu, Wen-Lian; Peng, Yifan; Arighi, Cecilia; Wu, Cathy H.; Vijay-Shanker, K.; Aydin, Ferhat; Husunbeyi, Zehra Melce; Ozgur, Arzucan; Shin, Soo-Yong; Kwon, Dongseop; Dolinski, Kara; Tyers, Mike; Wilbur, W. John; Comeau, Donald C. Share Save Share Save BioC interoperability track overviewComeau, Donald C.; Batista-Navarro, Riza Theresa; Dai, Hong-Jie; Dogan, Rezarta Islamaj; Yepes, Antonio Jimeno; Khare, Ritu; Lu, Zhiyong; Marques, Hernani; Mattingly, Carolyn J.; Neves, Mariana; Peng, Yifan; Rak, Rafal; Rinaldi, Fabio; Tsai, Richard Tzong-Han; Verspoor, Karin; Wiegers, Thomas C.; Wu, Cathy H.; Wilbur, W. John Share Save Share Save 
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