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Ruheng Wang

University of Texas Southwestern Medical Center

13H-index
57Paper Count
911Citation Count
Published Papers 17
Publication Date
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An Integrated and Robust Deep Learning Framework for Denoising and Analyzing Single-Cell Spatial Transcriptomics
errAdvanced Intelligent Systems
IF6.1
err2026-05-21
err0
errOAAI
errYaxuan Cui; Yang Cui; Ruheng Wang; Xin Zeng; Zheyong Zhu; Ding Yi; Ruihua Guo; Tetsuya Sakurai; Kenta Nakai; Xiucai Ye; Leyi Wei; Yong Chen
errShare
errSave
DiffuScope: A diffusion-regularized autoencoder for spatial transcriptomic clustering
errComputational Biology and Chemistry
IF3.1
err2025-10-24
err0
PREAI
errHua Shi; Ding Yi; Yang Cui; Ruheng Wang; Yan Li; Chunyan Ao; Ruihua Guo; Weihang Zhang; Tao Peng; Yuying Le; Yaxuan Cui; Leyi Wei
errShare
errSave
An interpretable deep learning model predicts RNA-small molecule binding sites
errFUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE
IF6.1
err2024-10-01
err1
PREAI
errXi, Wenyu; Wang, Ruheng; Wang, Li; Ye, Xiucai; Liu, Mingyang; Sakurai, Tetsuya
errShare
errSave
MucLiPred: Multi-Level Contrastive Learning for Predicting Nucleic Acid Binding Residues of Proteins
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2024-02-01
err3
PREAI
errZhang, Jiashuo; Wang, Ruheng; Wei, Leyi
errShare
errSave
Multiview Deep Learning-Based Molecule Design and Structural Optimization Accelerates Inhibitor Discover
errIEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS
IF8.9
err2024-01-01
err0
PREAI
errPang, Chao; Wang, Yu; Jiang, Yi; Wang, Ruheng; Yao, Xiaojun; Zou, Quan; Zeng, Xiangxiang; Su, Ran; Wei, Leyi
errShare
errSave
Multi-CGAN: Deep Generative Model-Based Multiproperty Antimicrobial Peptide Design
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2023-12-22
err7
PREAI
errYu, Haoqing; Wang, Ruheng; Qiao, Jianbo; Wei, Leyi
errShare
errSave
ConPep: Prediction of peptide contact maps with pre-trained biological language model and multi-view feature extracting strategy
errCOMPUTERS IN BIOLOGY AND MEDICINE
IF6.3
err2023-12-01
err7
PREAI
errWei, Qingxin; Wang, Ruheng; Jiang, Yi; Wei, Leyi; Sun, Yu; Geng, Jie; Su, Ran
errShare
errSave
AttenSyn: An Attention-Based Deep Graph Neural Network for Anticancer Synergistic Drug Combination Prediction
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2023-08-11
err15
PREAI
errWang, Tianshuo; Wang, Ruheng; Wei, Leyi
errShare
errSave
MVIL6: Accurate identification of IL-6-induced peptides using multi-view feature learning
errINTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
IF8.5
err2023-08-01
err9
PREAI
errWang, Ruheng; Feng, Yangfan; Sun, Meili; Jiang, Yi; Li, Zhongshen; Cui, Lizhen; Wei, Leyi
errShare
errSave
CACPP: A Contrastive Learning-Based Siamese Network to Identify Anticancer Peptides Based on Sequence Only
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2023-05-30
err11
PREAI
errYang, Xuetong; Jin, Junru; Wang, Ruheng; Li, Zhongshen; Wang, Yu; Wei, Leyi
errShare
errSave
DeepBIO: an automated and interpretable deep-learning platform for high-throughput biological sequence prediction, functional annotation and visualization analysis
errNUCLEIC ACIDS RESEARCH
IF13.1
err2023-02-17
err64
errOAAI
errWang, Ruheng; Jiang, Yi; Jin, Junru; Yin, Chenglin; Yu, Haoqing; Wang, Fengsheng; Feng, Jiuxin; Su, Ran; Nakai, Kenta; Zou, Quan; Wei, Leyi
errShare
errSave
Explainable Deep Hypergraph Learning Modeling the Peptide Secondary Structure Prediction
errADVANCED SCIENCE
IF14.1
err2023-02-15
err32
errOAAI
errJiang, Yi; Wang, Ruheng; Feng, Jiuxin; Jin, Junru; Liang, Sirui; Li, Zhongshen; Yu, Yingying; Ma, Anjun; Su, Ran; Zou, Quan; Ma, Qin; Wei, Leyi
errShare
errSave
iDNA-ABF: multi-scale deep biological language learning model for the interpretable prediction of DNA methylations
errGENOME BIOLOGY
IF9.4
err2022-10-17
err55
errOAAI
errJin, Junru; Yu, Yingying; Wang, Ruheng; Zeng, Xin; Pang, Chao; Jiang, Yi; Li, Zhongshen; Dai, Yutong; Su, Ran; Zou, Quan; Nakai, Kenta; Wei, Leyi
errShare
errSave
Mechanical properties of Q345 structural steel after artificial cooling from elevated temperatures
errJOURNAL OF CONSTRUCTIONAL STEEL RESEARCH
IF4.3
err2021-01-01
err43
PREAI
errZhang, Chuntao; Wang, Ruheng; Zhu, Li
errShare
errSave
Post-fire mechanical properties of Q460 and Q690 high strength steels after fire-fighting foam cooling
errTHIN-WALLED STRUCTURES
IF6.6
err2020-11-01
err50
PREAI
errZhang, Chuntao; Wang, Ruheng; Song, Gangbing
errShare
errSave
Effects of pre-fatigue damage on mechanical properties of Q690 high-strength steel
errCONSTRUCTION AND BUILDING MATERIALS
IF8
err2020-08-01
err40
PREAI
errZhang, Chuntao; Wang, Ruheng; Song, Gangbing
errShare
errSave
EDNTOM: An Ensemble Learning and Weight Mechanism-Based Nanopore Methylation Detection Tool
errACS Omega
IF4.3
err
err0
errOAAI
errGe Tian; Chenglin Yin; Jianbo Qiao; Ruheng Wang; Hua Shi; Feifei Cui; Zilong Zhang; Xinbo Jiang; Leyi Wei
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
Q
Quan Zou
H-index: 89 · Papers: 798
G
Gangbing Song
H-index: 78 · Papers: 721
王
王瑜 (Yu Wang)
H-index: 67 · Papers: 708
X
Xiangxiang Zeng
H-index: 65 · Papers: 363
K
Kenta Nakai
H-index: 60 · Papers: 469
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