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J

Jiří Filipovič

masaryk university

15H-index
81Paper Count
884Citation Count
Published Papers 15
Publication Date
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Towards analysis and refinement of auto-tuning spaces
errParallel Computing
IF2.1
err2026-01-01
err0
errOAAI
errFilipovic, Jiri; Gevorgyan, Suren Harutyunyan; Cesar, Eduardo; Sikora, Anna
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Automatic Tuning based on Hardware Performance Counters and Machine Learning
errFuture Generation Computer Systems
IF0
err2025-12-30
err0
errOAAI
errSuren Harutyunynan Gevorgyan; Eduardo César; Anna Sikora; Jiří Filipovič; Jordi Alcaraz
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errSave
How many (distinguishable) classes can we identify in single-particle analysis?
errACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY
IF3.8
err2025-10-01
err0
errOAAI
errLauzirika, O.; Pernica, M.; Herreros, D.; Ramirez-Aportela, E.; Krieger, J.; Gragera, M.; Iceta, M.; Conesa, P.; Fonseca, Y.; Jimenez, J.; Filipovic, J.; Carazo, J. M.; Sorzano, C. O. S.
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A methodology for comparing optimization algorithms for auto-tuning
errFUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE
IF6.1
err2024-10-01
err1
errOAAI
errWillemsen, Floris-Jan; Schoonhoven, Richard; Filipovic, Jiri; Torring, Jacob O.; van Nieuwpoort, Rob; van Werkhoven, Ben
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Umpalumpa: a framework for efficient execution of complex image processing workloads on heterogeneous nodes
errCOMPUTING
IF2.8
err2023-06-19
err1
PREAI
errStrelak, David; Myska, David; Petrovic, Filip; Polak, Jan; Ol'ha, Jaroslav; Filipovic, Jiri
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Using hardware performance counters to speed up autotuning convergence on GPUs
errJOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING
IF4
err2022-02-01
err9
errOAAI
errFilipovic, Jiri; Hozzova, Jana; Nezarat, Amin; Ol'ha, Jaroslav; Petrovic, Filip
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Advances in Xmipp for Cryo-Electron Microscopy: From Xmipp to Scipion
errMOLECULES
IF4.6
err2021-10-15
err21
errOAAI
errStrelak, David; Jimenez-Moreno, Amaya; Vilas, Jose L.; Ramirez-Aportela, Erney; Sanchez-Garcia, Ruben; Maluenda, David; Vargas, Javier; Herreros, David; Fernandez-Gimenez, Estrella; de Isidro-Gomez, Federico P.; Horacek, Jan; Myska, David; Horacek, Martin; Conesa, Pablo; Fonseca-Reyna, Yunior C.; Jimenez, Jorge; Martinez, Marta; Harastani, Mohamad; Jonic, Slavica; Filipovic, Jiri; Marabini, Roberto; Carazo, Jose M.; Sorzano, Carlos O. S.
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DeepAlign, a 3D alignment method based on regionalized deep learning for Cryo-EM
errJOURNAL OF STRUCTURAL BIOLOGY
IF5.1
err2021-06-01
err16
errOAAI
errJimenez-Moreno, A.; Strelak, D.; Filipovic, J.; Carazo, J. M.; Sorzano, C. O. S.
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CaverDock: A Novel Method for the Fast Analysis of Ligand Transport
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2020-09-01
err29
errOAAI
errFilipovic, Jiri; Vavra, Ondrej; Plhak, Jan; Bednar, David; Marques, Sergio M.; Brezovsky, Jan; Matyska, Ludek; Damborsky, Jiri
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A benchmark set of highly-efficient CUDA and OpenCL kernels and its dynamic autotuning with Kernel Tuning Toolkit
errFUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE
IF6.1
err2020-07-01
err21
errOAAI
errPetrovic, Filip; Strelak, David; Hozzova, Jana; Ol'ha, Jaroslav; Trembecky, Richard; Benkner, Siegfried; Filipovic, Jiri
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Caver web: identification of tunnels and channels in proteins and analysis of ligand transport
errJOURNAL OF BIOTECHNOLOGY
IF3.9
err2019-11-01
err0
errOAAI
errStourac, J.; Vavra, O.; Kokkonen, P.; Filipovic, J.; Pinto, G.; Schenkmayerova, A.; Damborsky, J.; Bednar, D.
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errSave
Fast Screening of Inhibitor Binding/Unbinding Using Novel Software Tool CaverDock
errFRONTIERS IN CHEMISTRY
IF4.2
err2019-10-29
err19
errOAAI
errPinto, Gaspar P.; Vavra, Ondrej; Filipovic, Jiri; Stourac, Jan; Bednar, David; Damborsky, Jiri
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errSave
Caver Web 1.0: identification of tunnels and channels in proteins and analysis of ligand transport
errNUCLEIC ACIDS RESEARCH
IF13.1
err2019-05-22
err158
errOAAI
errStourac, Jan; Vavra, Ondrej; Kokkonen, Piia; Filipovic, Jiri; Pinto, Gaspar; Brezovsky, Jan; Damborsky, Jiri; Bednar, David
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errSave
A GPU acceleration of 3-D Fourier reconstruction in cryo-EM
errINTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS
IF2.5
err2019-03-11
err15
PREAI
errStrelak, David; Sorzano, Carlos Oscar S.; Maria Carazo, Jose; Filipovic, Jiri
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errSave
Distributed Construction of Configuration Spaces for Real-Time Haptic Deformation Modeling
errIEEE TRANSACTIONS ON INDUSTRIAL ELECTRONICS
IF7.2
err2011-08-01
err19
PREAI
errPeterlik, Igor; Filipovic, Jiri
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Research Directions

No research directions
Co-authors
Cooperation Journals
J
Jiřı́ Damborský
H-index: 70 · Papers: 701
J
J.M. Carazo
H-index: 64 · Papers: 480
C
Carlos Óscar S. Sorzano
H-index: 53 · Papers: 385
J
J. Horáček
H-index: 46 · Papers: 250
J
Javier Vargas
H-index: 40 · Papers: 175
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