Not logged inPipeline Olympics: continuable benchmarking of computational workflows for DNA methylation sequencing data against an experimental gold standard
Lin, Yu-Yu; Breuer, Kersten; Weichenhan, Dieter; Lafrenz, Pascal; Sarnataro, Antonella; Wilk, Agata; Chepeleva, Maryna; Mucke, Oliver; Schonung, Maximilian; Petermann, Franziska; Kensche, Philip Reiner; Weiser, Lena; Thommen, Frank; Giacomelli, Gideon; Nordstroem, Karl; Gonzalez-Avalos, Edahi; Merkel, Angelika; Kretzmer, Helene; Fischer, Jonas; Kramer, Stephen; Iskar, Murat; Wolf, Stephan; Buchhalter, Ivo; Esteller, Manel; Lawerenz, Christian; Twardziok, Sven; Zapatka, Marc; Hovestadt, Volker; Schlesner, Matthias; Schulz, Marcel H.; Hoffmann, Steve; Gerhauser, Clarissa; Walter, Jorn; Hartmann, Mark; Lipka, Daniel B.; Assenov, Yassen; Bock, Christoph; Plass, Christoph; Toth, Reka; Lutsik, Pavlo .png)
Share.png)
SaveDNMT3A-dependent DNA methylation shapes the endothelial enhancer landscapeGehrs, Stephanie; Gu, Zuguang; Hey, Joschka; Weichenhan, Dieter; Buckwalter, Niklas; Jakab, Moritz; Hotz-Wagenblatt, Agnes; Breuer, Kersten; Prada, Maria Llamazares; Huebschmann, Daniel; Schlereth, Katharina; Plass, Christoph; Augustin, Hellmut Share Save Altered enhancer-promoter interaction leads to MNX1 expression in pediatric acute myeloid leukemia with t(7;12)(q36;p13)Weichenhan, Dieter; Riedel, Anna; Sollier, Etienne; Toprak, Umut H.; Hey, Joschka; Breuer, Kersten; Wierzbinska, Justyna A.; Touzart, Aurore; Lutsik, Pavlo; Baehr, Marion; Ostlund, Anders; Nilsson, Tina; Jacobsson, Susanna; Edler, Marcel; Waraky, Ahmed; Behrens, Yvonne Lisa; Goehring, Gudrun; Schlegelberger, Brigitte; Steinek, Clemens; Harz, Hartmann; Leonhardt, Heinrich; Dolnik, Anna; Reinhardt, Dirk; Bullinger, Lars; Palmqvist, Lars; Lipka, Daniel B.; Plass, Christoph Share Save TAL1 activation in T-cell acute lymphoblastic leukemia: a novel oncogenic 3' neo-enhancerSmith, Charlotte; Goyal, Ashish; Weichenhan, Dieter; Allemand, Eric; Mayakonda, Anand; Toprak, Umut; Riedel, Anna; Balducci, Estelle; Manojkumar, Manisha; Pejkovska, Anastasija; Muecke, Oliver; Sollier, Etienne; Bakr, Ali; Breuer, Kersten; Lutsik, Pavlo; Hermine, Olivier; Spicuglia, Salvatore; Asnafi, Vahid; Plass, Christoph; Touzart, Aurore Share Save Share Save ID3 promotes homologous recombination via non-transcriptional and transcriptional mechanisms and its loss confers sensitivity to PARP inhibitionBakr, Ali; Hey, Joschka; Sigismondo, Gianluca; Liu, Chun-Shan; Sadik, Ahmed; Goyal, Ashish; Cross, Alice; Iyer, Ramya Lakshmana; Muller, Patrick; Trauernicht, Max; Breuer, Kersten; Lutsik, Pavlo; Opitz, Christiane A.; Krijgsveld, Jeroen; Weichenhan, Dieter; Plass, Christoph; Popanda, Odilia; Schmezer, Peter Share Save Globally altered epigenetic landscape and delayed osteogenic differentiation in H3.3-G34W-mutant giant cell tumor of boneLutsik, Pavlo; Baude, Annika; Mancarella, Daniela; Oz, Simin; Kuhn, Alexander; Toth, Reka; Hey, Joschka; Toprak, Umut H.; Lim, Jinyeong; Viet Ha Nguyen; Jiang, Chao; Mayakonda, Anand; Hartmann, Mark; Rosemann, Felix; Breuer, Kersten; Vonficht, Dominik; Gruenschlaeger, Florian; Lee, Suman; Schuhmacher, Maren Kirstin; Kusevic, Denis; Jauch, Anna; Weichenhan, Dieter; Zustin, Jozef; Schlesner, Matthias; Haas, Simon; Park, Joo Hyun; Park, Yoon Jung; Oppermann, Udo; Jeltsch, Albert; Haller, Florian; Fellenberg, Joerg; Lindroth, Anders M.; Plass, Christoph Share Save 
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
