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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update Ostrovsky, Alexander E.; Mahmoud, Alexandru; Lonie, Andrew J.; Syme, Anna; Fouilloux, Anne; Bretaudeau, Anthony; Nekrutenko, Anton; Kumar, Anup; Eschenlauer, Arthur C.; DeSanto, Assunta D.; Guerler, Aysam; Serrano-Solano, Beatriz; Batut, Berenice; Gruening, Bjoern A.; Langhorst, Bradley W.; Carr, Bridget; Raubenolt, Bryan A.; Hyde, Cameron J.; Bromhead, Catherine J.; Barnett, Christopher B.; Royaux, Coline; Gallardo, Cristobal; Blankenberg, Daniel; Fornika, Daniel J.; Baker, Dannon; Bouvier, Dave; Clements, Dave; Morais, David A. de Lima; Tabernero, David Lopez; Lariviere, Delphine; Nasr, Engy; Afgan, Enis; Zambelli, Federico; Heyl, Florian; Psomopoulos, Fotis; Coppens, Frederik; Price, Gareth R.; Cuccuru, Gianmauro; Le Corguille, Gildas; Von Kuster, Greg; Akbulut, Gulsum Gudukbay; Rasche, Helena; Hans-Rudolf, Hotz; Eguinoa, Ignacio; Makunin, Igor; Ranawaka, Isuru J.; Taylor, James P.; Joshi, Jayadev; Hillman-Jackson, Jennifer; Goecks, Jeremy; Chilton, John M.; Kamali, Kaivan; Suderman, Keith; Poterlowicz, Krzysztof; Yvan, Le Bras; Lopez-Delisle, Lucille; Sargent, Luke; Bassetti, Madeline E.; Tangaro, Marco Antonio; van den Beek, Marius; Cech, Martin; Bernt, Matthias; Fahrner, Matthias; Tekman, Mehmet; Foell, Melanie C.; Schatz, Michael C.; Crusoe, Michael R.; Roncoroni, Miguel; Kucher, Natalie; Coraor, Nate; Stoler, Nicholas; Rhodes, Nick; Soranzo, Nicola; Pinter, Niko; Goonasekera, Nuwan A.; Moreno, Pablo A.; Videm, Pavankumar; Melanie, Petera; Mandreoli, Pietro; Jagtap, Pratik D.; Gu, Qiang; Weber, Ralf J. M.; Lazarus, Ross; Vorderman, Ruben H. P.; Hiltemann, Saskia; Golitsynskiy, Sergey; Garg, Shilpa; Bray, Simon A.; Gladman, Simon L.; Leo, Simone; Mehta, Subina P.; Griffin, Timothy J.; Jalili, Vahid; Yves, Vandenbrouck; Wen, Victor; Nagampalli, Vijay K.; Bacon, Wendi A.; de Koning, Willem; Maier, Wolfgang; Briggs, Peter J. Share Save
A single-cell RNA-sequencing training and analysis suite using the Galaxy framework Tekman, Mehmet; Batut, Berenice; Ostrovsky, Alexander; Antoniewski, Christophe; Clements, Dave; Ramirez, Fidel; Etherington, Graham J.; Hotz, Hans-Rudolf; Scholtalbers, Jelle; Manning, Jonathan R.; Bellenger, Lea; Doyle, Maria A.; Heydarian, Mohammad; Huang, Ni; Soranzo, Nicola; Moreno, Pablo; Mautner, Stefan; Papatheodorou, Irene; Nekrutenko, Anton; Taylor, James; Blankenberg, Daniel; Backofen, Rolf; Gruening, Bjoern Share Save
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Community-Driven Data Analysis Training for Biology Batut, Berenice; Hiltemann, Saskia; Bagnacani, Andrea; Baker, Dannon; Bhardwaj, Vivek; Blank, Clemens; Bretaudeau, Anthony; Brillet-Gueguen, Loraine; Cech, Martin; Chilton, John; Clements, Dave; Doppelt-Azeroual, Olivia; Erxleben, Anika; Freeberg, Mallory Ann; Gladman, Simon; Hoogstrate, Youri; Hotz, Hans-Rudolf; Houwaart, Torsten; Jagtap, Pratik; Lariviere, Delphine; Le Corguille, Gildas; Manke, Thomas; Mareuil, Fabien; Ramirez, Fidel; Ryan, Devon; Sigloch, Florian Christoph; Soranzo, Nicola; Wolff, Joachim; Videm, Pavankumar; Wolfien, Markus; Wubuli, Aisanjiang; Yusuf, Dilmurat; Taylor, James; Backofen, Rolf; Nekrutenko, Anton; Gruening, Bjoern Share Save
Practical Computational Reproducibility in the Life Sciences Gruening, Bjoern; Chilton, John; Koester, Johannes; Dale, Ryan; Soranzo, Nicola; van den Beek, Marius; Goecks, Jeremy; Backofen, Rolf; Nekrutenko, Anton; Taylor, James Share Save
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update Afgan, Enis; Baker, Dannon; Batut, Berenice; van den Beek, Marius; Bouvier, Dave; Cech, Martin; Chilton, John; Clements, Dave; Coraor, Nate; Gruening, Bjoern A.; Guerler, Aysam; Hillman-Jackson, Jennifer; Hiltemann, Saskia; Jalili, Vahid; Rasche, Helena; Soranzo, Nicola; Goecks, Jeremy; Taylor, James; Nekrutenko, Anton; Blankenberg, Daniel Share Save
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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update Afgan, Enis; Baker, Dannon; van den Beek, Marius; Blankenberg, Daniel; Bouvier, Dave; Cech, Martin; Chilton, John; Clements, Dave; Coraor, Nate; Eberhard, Carl; Gruening, Bjoern; Guerler, Aysam; Hillman-Jackson, Jennifer; Von Kuster, Greg; Rasche, Eric; Soranzo, Nicola; Turaga, Nitesh; Taylor, James; Nekrutenko, Anton; Goecks, Jeremy Share Save
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Alterations of a Cellular Cholesterol Metabolism Network Are a Molecular Feature of Obesity-Related Type 2 Diabetes and Cardiovascular Disease Ding, Jingzhong; Reynolds, Lindsay M.; Zeller, Tanja; Mueller, Christian; Lohman, Kurt; Nicklas, Barbara J.; Kritchevsky, Stephen B.; Huang, Zhiqing; de la Fuente, Alberto; Soranzo, Nicola; Settlage, Robert E.; Chuang, Chia-Chi; Howard, Timothy; Xu, Ning; Goodarzi, Mark O.; Chen, Y. -D. Ida; Rotter, Jerome I.; Siscovick, David S.; Parks, John S.; Murphy, Susan; Jacobs, David R., Jr.; Post, Wendy; Tracy, Russell P.; Wild, Philipp S.; Blankenberg, Stefan; Hoeschele, Ina; Herrington, David; McCall, Charles E.; Liu, Yongmei Share Save
Transcriptomic profiles of aging in purified human immune cells Reynolds, Lindsay M.; Ding, Jingzhong; Taylor, Jackson R.; Lohman, Kurt; Soranzo, Nicola; de la Fuente, Alberto; Liu, Tie Fu; Johnson, Craig; Barr, R. Graham; Register, Thomas C.; Donohue, Kathleen M.; Talor, Monica V.; Cihakova, Daniela; Gu, Charles; Divers, Jasmin; Siscovick, David; Burke, Gregory; Post, Wendy; Shea, Steven; Jacobs, David R., Jr.; Hoeschele, Ina; McCall, Charles E.; Kritchevsky, Stephen B.; Herrington, David; Tracy, Russell P.; Liu, Yongmei Share Save
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