arrow
Back
M

Mehran Karimzadeh

university of california

16H-index
87Paper Count
1.2KCitation Count
Published Papers 21
Publication Date
An intrinsically disordered region mediates RNA-binding selectivity and cellular activities of LARP6
err2026-02-19
err0
errOAAI
errFederica Capraro; Giancarlo Abis; Alessio Incocciati; Peter J. Simpson; Mehran Karimzadeh; Laura Masino; Alexander Barley; Tam T. T. Bui; Geoff Kelly; Hani Goodarzi; Maria R. Conte; Faraz K. Mardakheh
errShare
errSave
A multimodal cell-free RNA language model for liquid biopsy applications
err2025-12-10
err0
errOAAI
errMehran Karimzadeh; Aiden M. Sababi; Amir Momen-Roknabadi; Nae-Chyun Chen; Taylor B. Cavazos; Sukh Sekhon; Jieyang Wang; Rose Hanna; Alice Huang; Dang Nguyen; Selina Chen; Ti Lam; Kimberly H. Chau; Anna Hartwig; Lisa Fish; Helen Li; Babak Behsaz; Fereydoun Hormozdiari; Babak Alipanahi; Hani Goodarzi
errShare
errSave
Transformers and genome language models
err2025-03-13
err1
PREAI
errConsens, Micaela E.; Dufault, Cameron; Wainberg, Michael; Forster, Duncan; Karimzadeh, Mehran; Theis, Fabian J.; Moses, Alan; Wang, Bo
errShare
errSave
Deep generative AI models analyzing circulating orphan non-coding RNAs enable detection of early-stage lung cancer
err2024-11-21
err0
errOAAI
errKarimzadeh, Mehran; Momen-Roknabadi, Amir; Cavazos, Taylor B.; Fang, Yuqi; Chen, Nae-Chyun; Multhaup, Michael; Yen, Jennifer; Ku, Jeremy; Wang, Jieyang; Zhao, Xuan; Murzynowski, Philip; Wang, Kathleen; Hanna, Rose; Huang, Alice; Corti, Diana; Nguyen, Dang; Lam, Ti; Kilinc, Seda; Arensdorf, Patrick; Chau, Kimberly H.; Hartwig, Anna; Fish, Lisa; Li, Helen; Behsaz, Babak; Elemento, Olivier; Zou, James; Hormozdiari, Fereydoun; Alipanahi, Babak; Goodarzi, Hani
errShare
errSave
Predicting tumor ER and HER2 status using a cell-free RNA liquid biopsy assay
err2024-09-01
err0
PREAI
errSchwartzberg, L. S.; Yen, J.; Boyle, E.; Cavazos, T.; Karimzadeh, M.; Heydari, H.; Fish, L.; Trivedi, R.; Hormozdiari, F.; Lazar, A.; Alipanahi, B.
errShare
errSave
Integrative identification of non-coding regulatory regions driving metastatic prostate cancer
err2024-09-01
err0
errOAAI
errWoo, Brian J.; Moussavi-Baygi, Ruhollah; Karner, Heather; Karimzadeh, Mehran; Yousefi, Hassan; Lee, Sean; Garcia, Kristle; Joshi, Tanvi; Yin, Keyi; Navickas, Albertas; Gilbert, Luke A.; Wang, Bo; Asgharian, Hosseinali; Feng, Felix Y.; Goodarzi, Hani
errShare
errSave
Cell-free orphan noncoding RNAs and AI enable early detection of invasive breast cancer and ductal carcinoma in-situ
err2024-05-02
err0
PREAI
errTbeileh, Noura; Cavazos, Taylor; Karimzadeh, Mehran; Wang, Jeffrey; Huang, Alice; Dung Ngoc Lam; Kilinc, Seda; Wang, Jieyang; Zhao, Xuan; Pohl, Andy; Li, Helen; Fish, Lisa; Chau, Kimberly; Francis, Marra; Schwartzberg, Lee; Arensdorf, Patrick; Goodarzi, Hani; Hormozdiari, Fereydoun; Alipanahi, Babak
errShare
errSave
Beyond detection: AI-based classification of breast cancer invasiveness using cellfree orphan non-coding RNAs
err2024-03-22
err0
PREAI
errKarimzadeh, Mehran; Cavazos, Taylor B.; Chen, Nae-Chyun; Tbeileh, Noura K.; Siegel, David; Momen-Roknabadi, Amir; Yen, Jennifer; Ku, Jeremy; Chen, Selina; Corti, Diana; Huang, Alice; Nguyen, Dang; Hanna, Rose; Lam, Ti; Kilinc, Seda; Murzynowski, Philip; Wang, Jieyang; Zhao, Xuan; Pohl, Andy; Behsaz, Babak; Li, Helen; Fish, Lisa; Chau, Kim H.; Francis, Marra S.; Van't Veer, Laura J.; Esserman, Laura J.; Arensdorf, Patrick A.; Goodarzi, Hani; Hormozdiari, Fereydoun; Alipanahi, Babak
errShare
errSave
Orphan noncoding RNA (oncRNA) liquid biopsy assay is prognostic for survival in patients with triple-negative breast cancer (TNBC) and residual disease
err2024-03-22
err0
PREAI
errYoder, Rachel; Yen, Jennifer; Karimzadeh, Mehran; Staley, Joshua M.; Fernandez, India; Heinrich, Adam C.; Hormozdiari, Fereydoun; Gregg, Jeffrey; Godwin, Andrew K.; Acerbi, Irene; Trivedi, Raaj; Alipanahi, Babak; Stecklein, Shane R.; Sharma, Priyanka
errShare
errSave
Human papillomavirus integration transforms chromatin to drive oncogenesis
err2023-06-27
err10
errOAAI
errKarimzadeh, Mehran; Arlidge, Christopher; Rostami, Ariana; Lupien, Mathieu; Bratman, Scott V.; Hoffman, Michael M.
errShare
errSave
Blood-based early detection of non-small cell lung cancer using orphan noncoding RNAs
err2023-04-04
err0
PREAI
errKarimzadeh, Mehran; Wang, Jeffrey; Sababi, Aiden; Afolabi, Oluwadamilare I.; Lam, Dung Ngoc; Huang, Alice; Corti, Diana R.; Garcia, Kristle C.; Kilinc, Seda; Zhao, Xuan; Wang, Jieyang; Cavazos, Taylor B.; Arensdorf, Patrick; Chau, Kimberly H.; Li, Helen; Goodarzi, Hani; Fish, Lisa; Hormozdiari, Fereydoun; Alipanahi, Babak
errShare
errSave
The molecular consequences of androgen activity in the human breast
err2023-03-01
err11
errOAAI
errRaths, Florian; Karimzadeh, Mehran; Ing, Nathan; Martinez, Andrew; Yang, Yoona; Qu, Ying; Lee, Tian -Yu; Mulligan, Brianna; Devkota, Suzanne; Tilley, Wayne T.; Hickey, Theresa E.; Wang, Bo; Giuliano, Armando E.; Bose, Shikha; Goodarzi, Hani; Ray, Edward C.; Cui, Xiaojiang; Knott, Simon R. V.
errShare
errSave
Single-cell profiling of healthy human kidney reveals features of sex-based transcriptional programs and tissue-specific immunity
err2022-12-10
err21
errOAAI
errMcEvoy, Caitriona M.; Murphy, Julia M.; Zhang, Lin; Clotet-Freixas, Sergi; Mathews, Jessica A.; An, James; Karimzadeh, Mehran; Pouyabahar, Delaram; Su, Shenghui; Zaslaver, Olga; Roest, Hannes; Arambewela, Rangi; Liu, Lewis Y.; Zhang, Sally; Lawson, Keith A.; Finelli, Antonio; Wang, Bo; MacParland, Sonya A.; Bader, Gary D.; Konvalinka, Ana; Crome, Sarah Q.
errShare
errSave
Cell-Cell Contact Mediates Gene Expression and Fate Choice of Human Neural Stem/Progenitor Cells
errCELLS
IF5.2
err2022-05-25
err5
errOAAI
errMcIntyre, William B.; Karimzadeh, Mehran; Riazalhosseini, Yasser; Khazaei, Mohamad; Fehlings, Michael G.
errShare
errSave
Multiscale interactome analysis coupled with off-target drug predictions reveals drug repurposing candidates for human coronavirus disease
err2021-12-02
err12
errOAAI
errSugiyama, Michael G.; Cui, Haotian; Redka, Dar'ya S.; Karimzadeh, Mehran; Rujas, Edurne; Maan, Hassaan; Hayat, Sikander; Cheung, Kyle; Misra, Rahul; McPhee, Joseph B.; Viirre, Russell D.; Haller, Andrew; Botelho, Roberto J.; Karshafian, Raffi; Sabatinos, Sarah A.; Fairn, Gregory D.; Madani Tonekaboni, Seyed Ali; Windemuth, Andreas; Julien, Jean-Philippe; Shahani, Vijay; MacKinnon, Stephen S.; Wang, Bo; Antonescu, Costin N.
errShare
errSave
Massively multiplex single-molecule oligonucleosome footprinting
err2020-12-02
err61
errOAAI
errAbdulhay, Nour J.; McNally, Colin P.; Hsieh, Laura J.; Kasinathan, Sivakanthan; Keith, Aidan; Estes, Laurel S.; Karimzadeh, Mehran; Underwood, Jason G.; Goodarzi, Hani; Narlikar, Geeta J.; Ramani, Vijay
errShare
errSave
Umap and Bismap: quantifying genome and methylome mappability
err2018-08-30
err89
errOAAI
errKarimzadeh, Mehran; Ernst, Carl; Kundaje, Anshul; Hoffman, Michael M.
errShare
errSave
A General Framework for Interrogation of mRNA Stability Programs Identifies RNA-Binding Proteins that Govern Cancer Transcriptomes
err2018-05-01
err54
errOAAI
errPerron, Gabrielle; Jandaghi, Pouria; Solanki, Shraddha; Safisamghabadi, Maryam; Storoz, Cristina; Karimzadeh, Mehran; Papadakis, Andreas I.; Arseneault, Madeleine; Scelo, Ghislaine; Banks, Rosamonde E.; Tost, Jorg; Lathrop, Mark; Tanguay, Simon; Brazma, Alvis; Huang, Sidong; Brimo, Fadi; Najafabadi, Hamed S.; Riazalhosseini, Yasser
errShare
errSave
errShare
errSave