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SaveHigher Promoter Methylation of the Ubiquitin-Associated and SH3 Domain Containing A (UBASH3A) Gene Is Associated With T-Lymphocyte Ontogeny and Reduced Susceptibility to Early-Onset Sepsis
Wang, Ziyi; Amenyogbe, Nelly; Ben-Othman, Rym; Cai, Bing; Lo, Mandy; Idoko, Olubukola T.; Odumade, Oludare A.; Falsafi, Reza; Blimkie, Travis M.; An, Andy; Shannon, Casey P.; Montante, Sebastiano; Dhillon, Bhavjinder K.; Diray-Arce, Joann; Ozonoff, Al; Smolen, Kinga K.; Brinkman, Ryan R.; Mcenaney, Kerry; Angelidou, Asimenia; Richmond, Peter; Tebbutt, Scott J.; Kampmann, Beate; Hancock, Robert E. W.; Lee, Amy H. Y.; Levy, Ofer; Kollmann, Tobias R.; Martino, David Share Save Predictive gene expression signature diagnoses neonatal sepsis before clinical presentationAn, Andy Y.; Acton, Erica; Idoko, Olubukola T.; Shannon, Casey P.; Blimkie, Travis M.; Falsa, Reza; Wariri, Oghenebrume; Imam, Abdulazeez; Dibbasey, Tida; Bennike, Tue Bjerg; Smolen, Kinga K.; Diray-Arce, Joann; Ben-Othman, Rym; Montante, Sebastiano; Angelidou, Asimenia; Odumade, Oludare A.; Martino, David; Tebbutt, Scott J.; Levy, Ofer; Steen, Hanno; Kollmann, Tobias R.; Kampmann, Beate; Hancock, Robert E. W.; Lee, Amy H. Share Save DNA Methylation signatures underpinning blood neutrophil to lymphocyte ratio during first week of human lifeMartino, David; Kresoje, Nina; Amenyogbe, Nelly; Ben-Othman, Rym; Cai, Bing; Lo, Mandy; Idoko, Olubukola; Odumade, Oludare A.; Falsafi, Reza; Blimkie, Travis M.; An, Andy; Shannon, Casey P.; Montante, Sebastiano; Dhillon, Bhavjinder K.; Diray-Arce, Joann; Al Ozonoff, Al; Smolen, Kinga K.; Brinkman, Ryan R.; Mcenaney, Kerry; Angelidou, Asimenia; Richmond, Peter; Tebbutt, Scott J.; EPIC HIPC consortium, Beate; Kampmann, Beate; Levy, Ofer; Hancock, Robert E. W.; Lee, Amy H. Y.; Kollmann, Tobias R. Share Save Breastfeeding and Neonatal Age Influence Neutrophil-Driven Ontogeny of Blood Cell Populations in the First Week of Human LifeMontante, Sebastiano; Ben-Othman, Rym; Amenyogbe, Nelly; Angelidou, Asimenia; van den Biggelaar, Anita; Cai, Bing; Chen, Yixuan; Darboe, Alansana; Diray-Arce, Joann; Ford, Rebecca; Idoko, Olubukola; Lee, Amy; Lo, Mandy; Mcenaney, Kerry; Malek, Mehrnoush; Martino, David; Masiria, Geraldine; Odumade, Oludare A.; Pomat, William; Shannon, Casey; Smolen, Kinga; Ozonoff, Al; Richmond, Peter; Tebbutt, Scott; Levy, Ofer; Kampmann, Beate; Brinkman, Ryan; Kollmann, Tobias Share Save Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortalityGygi, Jeremy P.; Maguire, Cole; Patel, Ravi K.; Shinde, Pramod; Konstorum, Anna; Shannon, Casey P.; Xu, Leqi; Hoch, Annmarie; Jayavelu, Naresh Doni; Haddad, Elias K.; Reed, Elaine F.; Kraft, Monica; McComsey, Grace A.; Metcalf, Jordan P.; Ozonoff, Al; Esserman, Denise; Cairns, Charles B.; Rouphael, Nadine; Bosinger, Steven E.; Kim-Schulze, Seunghee; Krammer, Florian; Rosen, Lindsey B.; Bakel, Harm van; Wilson, Michael; Eckalbar, Walter L.; Maecker, Holden T.; Langelier, Charles R.; Steen, Hanno; Altman, Matthew C.; Montgomery, Ruth R.; Levy, Ofer; Melamed, Esther; Pulendran, Bali; Diray-Arce, Joann; Smolen, Kinga K.; Fragiadakis, Gabriela K.; Becker, Patrice M.; Sekaly, Rafick P.; Ehrlich, Lauren I. R.; Fourati, Slim; Peters, Bjoern; Kleinstein, Steven H.; Guan, Leying Share Save Share Save Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC studyOzonoff, Al; Jayavelu, Naresh Doni; Liu, Shanshan; Melamed, Esther; Milliren, Carly E.; Qi, Jingjing; Geng, Linda N.; Mccomsey, Grace A.; Cairns, Charles B.; Baden, Lindsey R.; Schaenman, Joanna; Shaw, Albert C.; Samaha, Hady; Seyfert-Margolis, Vicki; Krammer, Florian; Rosen, Lindsey B.; Steen, Hanno; Syphurs, Caitlin; Dandekar, Ravi; Shannon, Casey P.; Sekaly, Rafick P.; Ehrlich, Lauren I. R.; Corry, David B.; Kheradmand, Farrah; Atkinson, Mark A.; Brakenridge, Scott C.; Higuita, Nelson I. Agudelo; Metcalf, Jordan P.; Hough, Catherine L.; Messer, William B.; Pulendran, Bali; Nadeau, Kari C.; Davis, Mark M.; Sesma, Ana Fernandez; Simon, Viviana; van Bakel, Harm; Kim-Schulze, Seunghee; Hafler, David A.; Levy, Ofer; Kraft, Monica; Bime, Chris; Haddad, Elias K.; Calfee, Carolyn S.; Erle, David J.; Langelier, Charles R.; Eckalbar, Walter; Bosinger, Steven E.; Mcenaney, Kerry; Barton, Brenda; Lentucci, Claudia; Saluvan, Mehmet; Chang, Ana C.; Hoch, Annmarie; Albert, Marisa; Shaheen, Tanzia; Kho, Alvin T.; Thomas, Sanya; Chen, Jing; Murphy, Maimouna D.; Cooney, Mitchell; Hayati, Arash Nemati; Bryant, Robert; Abraham, James; Presnell, Scott; Jancsyk, Tomasz; Maguire, Cole; Lee, Brian; Fourati, Slim; Esserman, Denise A.; Guan, Leying; Gygi, Jeremy; Pawar, Shrikant; Brito, Anderson; Fragiadakis, Gabriela K.; Patel, Ravi; Tebbutt, Scott J.; Overton, James A.; Vita, Randi; Westendorf, Kerstin; Thyagarajan, Rama V.; Rousseau, Justin F.; Wylie, Dennis; Triplett, Todd A.; Kojic, Erna; Chinthrajah, Sharon; Ahuja, Neera; Rogers, Angela J.; Artandi, Maja; Yendewa, George; Powell, Debra L.; Kim, James N.; Simmons, Brent; Goonewardene, I. Michael; Smith, Cecilia M.; Martens, Mark; Sherman, Amy C.; Walsh, Stephen R.; Issa, Nicolas C.; Salehi-Rad, Ramin; Dela Cruz, Charles; Farhadian, Shelli; Iwasaki, Akiko; Ko, Albert I.; Anderson, Evan J.; Mehta, Aneesh K.; Sevransky, Jonathan E.; Leligdowicz, Aleksandra; Matthay, Michael A.; Singer, Jonathan P.; Kangelaris, Kirsten N.; Hendrickson, Carolyn M.; Krummel, Matthew F.; Woodruff, Prescott G.; Anderson, Matthew L.; Guirgis, Faheem W.; Drevets, Douglas A.; Brown, Brent R.; Siegel, Sarah A. R.; Lu, Zhengchun; Mosier, Jarrod; Kimura, Hiroki; Khor, Bernard; Rahman, Adeeb; Stadlbauer, Daniel; Dutta, Jayeeta; Gonzalez-Reiche, Ana Silvia; van de Guchte, Adriana; Carreno, Juan Manuel; Singh, Gagandeep; Raskin, Ariel; Tcheou, Johnstone; Bielak, Dominika; Kawabata, Hisaaki; Xie, Hui; Kelly, Geoffrey; Patel, Manishkumar; Nie, Kai; Yellin, Temima; Fried, Miriam; Sullivan, Leeba; Morris, Sara; Sieg, Scott; van Zalm, Patrick; Fatou, Benoit; Mendez, Kevin; Lasky-Su, Jessica; Hutton, Scott R.; Michelotti, Greg; Wong, Kari; Jha, Meenakshi; Viode, Arthur; Kanarek, Naama; Petrova, Boryana; Zhao, Yujiao; Boddapati, Arun K.; Tharp, Greg K.; Pellegrini, Kathryn L.; Beagle, Elizabeth; Cowan, David; Hamilton, Sydney; Ribeiro, Susan Pereira; Hodder, Thomas; Lee, Serena; Wilson, Michael R.; Alvarenga, Bonny; Rajan, Jayant; Schroeder, Andrew W.; Tsitsiklis, Alexandra; Mick, Eran; Guerrero, Yanedth Sanchez; Love, Christina; Maliskova, Lenka; Adkisson, Michael; Siles, Nadia; Geltman, Janelle; Hurley, Kerin; Saksena, Miti; Altman, Deena; Srivastava, Komal; Eaker, Lily Q.; Bermudez-Gonzalez, Maria C.; Beach, Katherine F.; Sominsky, Levy A.; Azad, Arman R.; Mulder, Lubbertus C. F.; Kleiner, Giulio; Lee, Alexandra S.; Do, Evan; Fernandes, Andrea; Manohar, Monali; Hagan, Thomas; Blish, Catherine A.; Din, Hena Naz; Roque, Jonasel; Yang, Samuel; Sigal, Natalia; Chang, Iris; Tribout, Heather; Harris, Paul; Consolo, Mary; Connors, Jennifer; Bernui, Mariana; Kutzler, Michele A.; Edwards, Carolyn; Lee, Edward; Lin, Edward; Croen, Brett; Semenza, Nicholas C.; Rogowski, Brandon; Melnyk, Nataliya; Woloszczuk, Kyra; Cusimano, Gina; Bell, Mathew R.; Furukawa, Sara; Mclin, Renee; Schearer, Pamela; Sheidy, Julie; Tegos, George P.; Nagle, Crystal; Smolen, Kinga; Desjardins, Michael; van Haren, Simon; Mitre, Xhoi; Cauley, Jessica; Li, Xiaofang; Tong, Alexandra; Evans, Bethany; Montesano, Christina; Licona, Jose Humberto; Krauss, Jonathan; Chang, Jun Bai Park; Izaguirre, Natalie; Rooks, Rebecca; Elashoff, David; Brook, Jenny; Ramires-Sanchez, Estefania; Llamas, Megan; Rivera, Adreanne; Perdomo, Claudia; Ward, Dawn C.; Magyar, Clara E.; Fulcher, Jennifer A.; Pickering, Harry C.; Sen, Subha; Chaudhary, Omkar; Coppi, Andreas; Fournier, John; Mohanty, Subhasis; Muenker, M. Catherine; Nelson, Allison; Raddassi, Khadir; Rainone, Michael; Ruff, William E.; Salahuddin, Syim; Schulz, Wade L.; Vijayakumar, Pavithra; Wang, Haowei; Wunder, Elsio; Young, H. Patrick; Rothman, Jessica; Konstorum, Anna; Chen, Ernie; Cotsapas, Chris; Grubaugh, Nathan D.; Wang, Xiaomei; Xu, Leqi; Asashima, Hiromitsu; Bristow, Laurel; Hussaini, Laila; Hellmeister, Kieffer; Wimalasena, Sonia Tandon; Cheng, Andrew; Spainhour, Christine; Scherer, Erin M.; Johnson, Brandi; Bechnak, Amer; Ciric, Caroline R.; Hewitt, Lauren; Carter, Erin; Mcnair, Nina; Panganiban, Bernadine; Huerta, Christopher; Usher, Jacob; Vaysman, Tatyana; Holland, Steven M.; Abe-Jones, Yumiko; Asthana, Saurabh; Beagle, Alexander; Bhide, Sharvari; Carrillo, Sidney A.; Chak, Suzanna; Ghale, Rajani; Gonzalez, Ana; Jauregui, Alejandra; Jones, Norman; Lea, Tasha; Lee, Deanna; Lota, Raphael; Milush, Jeff; Nguyen, Viet; Pierce, Logan; Prasad, Priya A.; Rao, Arjun; Samad, Bushra; Shaw, Cole; Sigman, Austin; Sinha, Pratik; Ward, Alyssa; Willmore, Andrew; Zhan, Jenny; Rashid, Sadeed; Rodriguez, Nicklaus; Tang, Kevin; Altamirano, Luz Torres; Betancourt, Legna; Curiel, Cindy; Sutter, Nicole; Paz, Maria Tercero; Tietje-Ulrich, Gayelan; Leroux, Carolyn; Thakur, Neeta; Vasquez, Joshua J.; Santhosh, Lekshmi; Song, Li-Zhen; Nelson, Ebony; Moldawer, Lyle L.; Borresen, Brittany; Roth-Manning, Brittney; Ungaro, Ricardo F.; Oberhaus, Jordan; Booth, J. Leland; Sinko, Lauren A.; Brunton, Amanda; Sullivan, Peter E.; Strnad, Matthew; Lyski, Zoe L.; Coulter, Felicity J.; Micheleti, Courtney; Conway, Michelle; Francisco, Dave; Molzahn, Allyson; Erickson, Heidi; Wilson, Connie Cathleen; Schunk, Ron; Sierra, Bianca; Hughes, Trina; Peters, Bjoern; Kleinstein, Steven H.; Reed, Elaine F.; Augustine, Alison D.; Diray-Arce, Joann; Maecker, Holden T.; Altman, Matthew C.; Montgomery, Ruth R.; Becker, Patrice M.; Rouphael, Nadine Share Save Interferon β-1a ring prophylaxis to reduce household transmission of SARS-CoV-2: a cluster randomised clinical trialCastro-Rodriguez, Jose A.; Fish, Eleanor N.; Montgomery, Samuel T.; Kollmann, Tobias R.; Iturriaga, Carolina; Shannon, Casey; Karpievitch, Yuliya; Ho, Joseph; Chen, Virginia; Balshaw, Robert; Ben-Othman, Rym; Aniba, Radhouane; Gidi-Yunge, Francisca; Hartnell, Lucy; Hancock, David G.; Perez-Mateluna, Guillermo; Urzua, Marcela; Tebbutt, Scott J.; Garcia-Huidobro, Diego; Perret, Cecilia; Borzutzky, Arturo; Stick, Stephen M. Share Save Regulatory T Cell Biomarkers Identify Patients at Risk of Developing Acute Cellular Rejection in the First Year Following Heart TransplantationKim, Ji-Young V.; Assadian, Sara; Hollander, Zsuzsanna; Burns, Paloma; Shannon, Casey P.; Lam, Karen; Toma, Mustafa; Ignaszewski, Andrew; Davies, Ross A.; Delgado, Diego; Haddad, Haissam; Isaac, Debra; Kim, Daniel; Mui, Alice; Rajda, Miroslaw; West, Lori; White, Michel; Zieroth, Shelley; Keown, Paul A.; McMaster, W. Robert; Ng, Raymond T.; McManus, Bruce M.; Levings, Megan K.; Tebbutt, Scott J. Share Save Share Save Share Save Ontogeny of plasma cytokine and chemokine concentrations across the first week of human lifeSmolen, Kinga K.; Plotkin, Alec L.; Shannon, Casey P.; Idoko, Olubukola T.; Pak, Jensen; Darboe, Alansana; van Haren, Simon; Amenyogbe, Nelly; Tebbutt, Scott J.; Kollmann, Tobias R.; Kampmann, Beate; Al Ozonoff; Levy, Ofer; Odumade, Oludare A. Share Save Machine Learning-Based Single Cell and Integrative Analysis Reveals That Baseline mDC Predisposition Correlates With Hepatitis B Vaccine Antibody ResponseAevermann, Brian D.; Shannon, Casey P.; Novotny, Mark; Ben-Othman, Rym; Cai, Bing; Zhang, Yun; Ye, Jamie C.; Kobor, Michael S.; Gladish, Nicole; Lee, Amy Huei-Yi; Blimkie, Travis M.; Hancock, Robert E.; Llibre, Alba; Duffy, Darragh; Koff, Wayne C.; Sadarangani, Manish; Tebbutt, Scott J.; Kollmann, Tobias R.; Scheuermann, Richard H. Share Save Biogeography of the Relationship between the Child Gut Microbiome and Innate Immune SystemAmenyogbe, Nelly; Dimitriu, Pedro; Smolen, Kinga K.; Brown, Eric M.; Shannon, Casey P.; Tebbutt, Scott J.; Cooper, Phillip J.; Marchant, Arnaud; Goetghebuer, Tessa; Esser, Monika; Finlay, Brett B.; Kollmann, Tobias R.; Mohn, William W. Share Save Proteomic Portraits Reveal Evolutionarily Conserved and Divergent Responses to Spinal Cord InjurySkinnider, Michael A.; Rogalski, Jason; Tigchelaar, Seth; Manouchehri, Neda; Prudova, Anna; Jackson, Angela M.; Nielsen, Karina; Jeong, Jaihyun; Chaudhary, Shalini; Shortt, Katelyn; Gallagher-Kurtzke, Ylonna; So, Kitty; Fong, Allan; Gupta, Rishab; Okon, Elena B.; Rizzuto, Michael A.; Dong, Kevin; Streijger, Femke; Belanger, Lise; Ritchie, Leanna; Tsang, Angela; Christie, Sean; Mac-Thiong, Jean-Marc; Bailey, Christopher; Ailon, Tamir; Charest-Morin, Raphaele; Dea, Nicolas; Wilson, Jefferson R.; Dhall, Sanjay; Paquette, Scott; Street, John; Fisher, Charles G.; Dvorak, Marcel F.; Shannon, Casey; Borchers, Christoph; Balshaw, Robert; Foster, Leonard J.; Kwon, Brian K. Share Save Multi-Omic Data Integration Allows Baseline Immune Signatures to Predict Hepatitis B Vaccine Response in a Small CohortShannon, Casey P.; Blimkie, Travis M.; Ben-Othman, Rym; Gladish, Nicole; Amenyogbe, Nelly; Drissler, Sibyl; Edgar, Rachel D.; Chan, Queenie; Krajden, Mel; Foster, Leonard J.; Kobor, Michael S.; Mohn, William W.; Brinkman, Ryan R.; Le Cao, Kim-Anh; Scheuermann, Richard H.; Tebbutt, Scott J.; Hancock, Robert Ew; Koff, Wayne C.; Kollmann, Tobias R.; Sadarangani, Manish; Lee, Amy Huei-Yi Share Save Innate Immune Responses and Gut Microbiomes Distinguish HIV-Exposed from HIV-Unexposed Children in a Population-Specific MannerAmenyogbe, Nelly; Dimitriu, Pedro; Cho, Patricia; Ruck, Candice; Fortuno, Edgardo S.; Cai, Bing; Alimenti, Ariane; Cote, Helene C. F.; Maan, Evelyn J.; Slogrove, Amy L.; Esser, Monika; Marchant, Arnaud; Goetghebuer, Tessa; Shannon, Casey P.; Tebbutt, Scott J.; Kollmann, Tobias R.; Mohn, William W.; Smolen, Kinga K. Share Save Systems Biology Methods Applied to Blood and Tissue for a Comprehensive Analysis of Immune Response to Hepatitis B Vaccine in AdultsBen-Othman, Rym; Cai, Bing; Liu, Aaron C.; Varankovich, Natallia; He, Daniel; Blimkie, Travis M.; Lee, Amy H.; Gill, Erin E.; Novotny, Mark; Aevermann, Brian; Drissler, Sibyl; Shannon, Casey P.; McCann, Sarah; Marty, Kim; Bjornson, Gordean; Edgar, Rachel D.; Lin, David Tse Shen; Gladish, Nicole; Maclsaac, Julia; Amenyogbe, Nelly; Chan, Queenie; Llibre, Alba; Collin, Joyce; Landais, Elise; Le, Khoa; Reiss, Samantha M.; Koff, Wayne C.; Havenar-Daughton, Colin; Heran, Manraj; Sangha, Bippan; Walt, David; Krajden, Mel; Crotty, Shane; Sok, Devin; Briney, Bryan; Burton, Dennis R.; Duffy, Darragh; Foster, Leonard J.; Mohn, William W.; Kobor, Michael S.; Tebbutt, Scott J.; Brinkman, Ryan R.; Scheuermann, Richard H.; Hancock, Robert E. W.; Kollmann, Tobias R.; Sadarangani, Manish Share Save Interferon-α2b Treatment for COVID-19 (vol 11, 1061, 2020)Zhou, Qiong; Chen, Virginia; Shannon, Casey P.; Wei, Xiao-Shan; Xiang, Xuan; Wang, Xu; Wang, Zi-Hao; Tebbutt, Scott J.; Kollmann, Tobias R.; Fish, Eleanor N. Share Save 
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