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C

Charles Girardot

european molecular biology laboratory (embl)

22H-index
57Paper Count
3.2KCitation Count
Published Papers 20
Publication Date
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A noncanonical role of glycolytic metabolites controlling the timing of mouse embryo segmentation
errScience Advances
IF12.5
err2025-09-19
err0
errOAAI
errHidenobu Miyazawa; Jona Rada; Nicole Prior; Paul Gerald Layague Sanchez; Emilia Esposito; Daria Bunina; Charles Girardot; Judith Zaugg; Alexander Aulehla
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errSave
Targeted barcoding of variable antibody domains and individual transcriptomes of the human B-cell repertoire using Link-Seq
errPNAS NEXUS
IF3.8
err2025-01-09
err0
errOAAI
errHu, Hongxing; Zhou, Fan; Ma, Xiaoli; Brokstad, Karl Albert; Kolmar, Leonie; Girardot, Charles; Benes, Vladimir; Cox, Rebecca J.; Merten, Christoph A.
errShare
errSave
Chromatin gene-gene loops support the cross-regulation of genes with related function
errMOLECULAR CELL
IF16.6
err2024-03-01
err8
errOAAI
errPollex, Tim; Marco-Ferreres, Raquel; Ciglar, Lucia; Ghavi-Helm, Yad; Rabinowitz, Adam; Viales, Rebecca Rodriguez; Schaub, Christoph; Jankowski, Aleksander; Girardot, Charles; Furlong, Eileen E. M.
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errSave
A stem cell zoo uncovers intracellular scaling of developmental tempo across mammals
errCELL STEM CELL
IF20.4
err2023-07-01
err38
errOAAI
errLazaro, Jorge; Costanzo, Maria; Sanaki-Matsumiya, Marina; Girardot, Charles; Hayashi, Masafumi; Hayashi, Katsuhiko; Diecke, Sebastian; Hildebrandt, Thomas B.; Lazzari, Giovanna; Wu, Jun; Petkov, Stoyan; Behr, Ruediger; Trivedi, Vikas; Matsuda, Mitsuhiro; Ebisuya, Miki
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errSave
CTCF, BEAF-32, and CP190 are not required for the establishment of TADs in early Drosophila embryos but have locus-specific roles
errSCIENCE ADVANCES
IF12.5
err2023-02-03
err24
errOAAI
errCavalheiro, Gabriel R.; Girardot, Charles; Viales, Rebecca R.; Pollex, Tim; Cao, T. B. Ngoc; Lacour, Perrine; Feng, Songjie; Rabinowitz, Adam; Furlong, Eileen E. M.
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errSave
The hourglass model of evolutionary conservation during embryogenesis extends to developmental enhancers with signatures of positive selection
errGENOME RESEARCH
IF5.5
err2021-07-15
err12
errOAAI
errLiu, Jialin; Viales, Rebecca R.; Khoueiry, Pierre; Reddington, James P.; Girardot, Charles; Furlong, Eileen E. M.; Robinson-Rechavi, Marc
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errSave
Lineage-Resolved Enhancer and Promoter Usage during a Time Course of Embryogenesis
errDEVELOPMENTAL CELL
IF8.7
err2020-12-01
err32
errOAAI
errReddington, James P.; Garfield, David A.; Sigalova, Olga M.; Calviello, Aslihan Karabacak; Marco-Ferreres, Raquel; Girardot, Charles; Viales, Rebecca R.; Degner, Jacob F.; Ohler, Uwe; Furlong, Eileen E. M.
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errSave
Expanding the mesodermal transcriptional network by genome-wide identification of Zinc finger homeodomain 1 (Zfh1) targets
errFEBS LETTERS
IF3
err2019-05-29
err3
errOAAI
errWu, Wei-Hang; Kuo, Tai-Hong; Kao, Chia-Wei; Girardot, Charles; Hung, Sheng-Jou; Liu, Tsunglin; Furlong, Eileen E. M.; Liu, Ya-Hsin
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errSave
The Role of Chromatin Accessibility in cis-Regulatory Evolution
errGENOME BIOLOGY AND EVOLUTION
IF2.8
err2019-05-22
err16
errOAAI
errPeng, Pei-Chen; Khoueiry, Pierre; Girardot, Charles; Reddington, James P.; Garfield, David A.; Furlong, Eileen E. M.; Sinha, Saurabh
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errSave
Opbp is a new architectural/insulator protein required for ribosomal gene expression
errNUCLEIC ACIDS RESEARCH
IF13.1
err2017-09-25
err28
errOAAI
errZolotarev, Nikolay; Maksimenko, Oksana; Kyrchanova, Olga; Sokolinskaya, Elena; Osadchiy, Igor; Girardot, Charles; Bonchuk, Artem; Ciglar, Lucia; Furlong, Eileen E. M.; Georgiev, Pavel
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errSave
Uncoupling evolutionary changes in DNA sequence, transcription factor occupancy and enhancer activity
errELIFE
IF0
err2017-08-09
err38
errOAAI
errKhoueiry, Pierre; Girardot, Charles; Ciglar, Lucia; Peng, Pei-Chen; Gustafson, E. Hilary; Sinha, Saurabh; Furlong, Eileen E. M.
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errSave
Identification and in silico modeling of enhancers reveals new features of the cardiac differentiation network
errDEVELOPMENT
IF3.6
err2016-12-01
err5
errOAAI
errSeyres, Denis; Ghavi-Helm, Yad; Junion, Guillaume; Taghli-Lamallem, Ouarda; Guichard, Celine; Roeder, Laurence; Girardot, Charles; Furlong, Eileen E. M.; Perrin, Laurent
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errSave
Expanding the Circuitry of Pluripotency by Selective Isolation of Chromatin-Associated Proteins
errMOLECULAR CELL
IF16.6
err2016-11-01
err75
errOAAI
errRafiee, Mahmoud-Reza; Girardot, Charles; Sigismondo, Gianluca; Krijgsveld, Jeroen
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errSave
Coordinated repression and activation of two transcriptional programs stabilizes cell fate during myogenesis
errDEVELOPMENT
IF3.6
err2014-07-01
err24
errOAAI
errCiglar, Lucia; Girardot, Charles; Wilczynski, Bartek; Braun, Martina; Furlong, Eileen E. M.
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errSave
Subtle Changes in Motif Positioning Cause Tissue-Specific Effects on Robustness of an Enhancer's Activity
errPLOS GENETICS
IF3.7
err2014-01-02
err59
errOAAI
errErceg, Jelena; Saunders, Timothy E.; Girardot, Charles; Devos, Damien P.; Hufnagel, Lars; Furlong, Eileen E. M.
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errSave
Analysis of variation at transcription factor binding sites in Drosophila and humans
errGENOME BIOLOGY
IF9.4
err2012-09-05
err86
errOAAI
errSpivakov, Mikhail; Akhtar, Junaid; Kheradpour, Pouya; Beal, Kathryn; Girardot, Charles; Koscielny, Gautier; Herrero, Javier; Kellis, Manolis; Furlong, Eileen E. M.; Birney, Ewan
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errSave
Model-based method for transcription factor target identification with limited data
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2010-04-12
err84
errOAAI
errHonkela, Antti; Girardot, Charles; Gustafson, E. Hilary; Liu, Ya-Hsin; Furlong, Eileen E. M.; Lawrence, Neil D.; Rattray, Magnus
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errSave
Dynamic Regulation by Polycomb Group Protein Complexes Controls Pattern Formation and the Cell Cycle in Drosophila
errDEVELOPMENTAL CELL
IF8.7
err2008-12-01
err204
errOAAI
errOktaba, Katarzyna; Gutierrez, Luis; Gagneur, Julien; Girardot, Charles; Sengupta, Aditya K.; Furlong, Eileen E. M.; Mueller, Juerg
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errSave
4DXpress:: a database for cross-species expression pattern comparisons
errNUCLEIC ACIDS RESEARCH
IF13.1
err2007-12-23
err35
errOAAI
errHaudry, Yannick; Berube, Hugo; Letunic, Ivica; Weeber, Paul-Daniel; Gagneur, Julien; Girardot, Charles; Kapushesky, Misha; Arendt, Detlev; Bork, Peer; Brazma, Alvis; Furlong, Eileen E. M.; Wittbrodt, Joachim; Henrich, Thorsten
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Elucidation of an archaeal replication protein network to generate enhanced PCR enzymes
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2002-05-01
err65
errOAAI
errMotz, M; Kober, I; Girardot, C; Loeser, E; Bauer, U; Albers, M; Moeckel, G; Minch, E; Voss, H; Kilger, C; Koegl, M
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Research Directions

No research directions
Co-authors
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A
Alvis Brāzma
H-index: 97 · Papers: 375
V
Vladimı́r Beneš
H-index: 88 · Papers: 582
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