Brian Kalmbach - Publications, H-index & Citations

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Brian Kalmbach

Allen Institute for Brain Science

32H-index

84Paper Count

4.8KCitation Count

Published Papers 16

Publication Date

Connecting single-cell transcriptomes to projectomes in the mouse visual cortex

Nature

IF48.5

2026-07-01

OAAI

Staci A. Sorensen; Nathan W. Gouwens; Yun Wang; Matt Mallory; Agata Budzillo; Rachel Dalley; Brian R. Lee; Olga Gliko; Hsien-chi Kuo; Xiuli Kuang; Rusty Mann; Leila Ahmadinia; Lauren Alfiler; Fahimeh Baftizadeh; Katherine S. Baker; Sarah Bannick; Darren Bertagnolli; Kris Bickley; Phil Bohn; Jasmine Bomben; Chris Bowman; Gabriella Boyer; Krissy Brouner; Dillan Brown; Alex Cahoon; Natalie Chen; Chao Chen; Kai Chen; Maggie Chvilicek; Forrest Collman; Tanya L. Daigle; Tim Dawes; Rebecca de Frates; Nick Dee; Maxwell DePartee; Tom Egdorf; Laila El-Hifnawi; Rachel Enstrom; Luke Esposito; Colin Farrell; Rohan Gala; Clare Gamlin; Amanda Gary; Andrew Glomb; Olena Gerasymchuk; Jeff Goldy; Hong Gu; Kristen Hadley; Mike Hawrylycz; Alex Henry; Dijon Hill; Karla E. Hirokawa; Zili Huang; Katelyn Johnson; Zoe Juneau; Sara Kebede; Lisa Kim; Lauren Kruse; Changkyu Lee; Arielle L. Leon; Phil Lesnar; Quinn Lheureux; Anan Li; Yaoyao Li; Elizabeth Liang; Katie Link; Michelle Maxwell; Medea McGraw; Delissa A. McMillen; Alice Mukora; Lindsay Ng; Thomas Ochoa; Aaron Oldre; Daniel Park; Christina Alice Pom; Zoran Popovich; Lydia Potekhina; Ram Rajanbabu; Shea Ransford; Melissa R. Reding; Augustin Ruiz; David Sandman; Martin Schroedter; Josh Sevigny; Lyudmila Shulga; La’Akea Siverts; Cliff R. Slaughterbeck; Kimberly A. Smith; Michelle Stoecklin; Josef Sulc; Susan M. Sunkin; Michael Tieu; Jonathan T. Ting; Jessica Trinh; Ramel Velasco; Sara Vargas; Dave Vumbaco; Miranda Walker; Micheal Wang; Adrian Wanner; Jack Waters; Mirah Wells; Grace Williams; Julia A. Wilson; Wei Xiong; Ed S. Lein; Jim Berg; Brian E. Kalmbach; Shenqin Yao; Hui Gong; Qingming Luo; Quanxin Wang; Lydia Ng; Uygar Sümbül; Zizhen Yao; Tim Jarsky; Bosiljka Tasic; Hongkui Zeng

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HCN channels reveal conserved and divergent physiology in supragranular pyramidal neurons in primate species

Communications Biology

IF5.1

2026-01-20

OAAI

Cristina Radaelli; Matthew Schmitz; Xiao-Ping Liu; Scott Sawchuk; Ximena Opitz-Araya; Mark Hudson; Naz Taskin; Darren Bertagnolli; Jeff Goldy; Andrew L. Ko; Benjamin L. Grannan; Jason S. Hauptman; Anoop P. Patel; Charles Cobbs; Kimberly A. Smith; William J. Spain; Ed S. Lein; Trygve Bakken; Nikolai C. Dembrow; Jonathan T. Ting; Brian E. Kalmbach

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Distinctive physiology of molecularly identified medium spiny neurons in the macaque putamen

CELL REPORTS

IF6.9

2024-11-01

OAAI

Ting, Jonathan T.; Johansen, Nelson J.; Kalmbach, Brian E.; Taskin, Naz; Lee, Brian; Clark, Jason K.; Kendrick, Rennie; Ng, Lindsay; Radaelli, Cristina; Weed, Natalie; Enstrom, Rachel; Ransford, Shea; Redford, Ingrid; Walling-Bell, Sarah; Dalley, Rachel; Tieu, Michael; Goldy, Jeff; Jorstad, Nik; Smith, Kimberly; Bakken, Trygve; Lein, Ed S.; Owen, Scott F.

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Areal specializations in the morpho-electric and transcriptomic properties of primate layer 5 extratelencephalic projection neurons

CELL REPORTS

IF6.9

2024-09-01

OAAI

Dembrow, Nikolai C.; Sawchuk, Scott; Dalley, Rachel; Opitz-Araya, Ximena; Hudson, Mark; Radaelli, Cristina; Alfiler, Lauren; Walling-Bell, Sarah; Bertagnolli, Darren; Goldy, Jeff; Johansen, Nelson; Miller, Jeremy A.; Nasirova, Kamiliam; Owen, Scott F.; Parga-Becerra, Alejandro; Taskin, Naz; Tieu, Michael; Vumbaco, David; Weed, Natalie; Wilson, Julia; Lee, Brian R.; Smith, Kimberly A.; Sorensen, Staci A.; Spain, William J.; Lein, Ed S.; Perlmutter, Steve I.; Ting, Jonathan T.; Kalmbach, Brian E.

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Morpho-electric diversity of human hippocampal CA1 pyramidal neurons

CELL REPORTS

IF6.9

2024-04-01

OAAI

Mertens, Eline J.; Leibner, Yoni; Pie, Jean; Galakhova, Anna A.; Waleboer, Femke; Meijer, Julia; Heistek, Tim S.; Wilbers, Rene; Heyer, Djai; Goriounova, Natalia A.; Idema, Sander; Verhoog, Matthijs B.; Kalmbach, Brian E.; Lee, Brian R.; Gwinn, Ryder P.; Lein, Ed S.; Aronica, Eleonora; Ting, Jonathan; Mansvelder, Huibert D.; Segev, Idan; de Kock, Christiaan P. J.

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Target cell-specific synaptic dynamics of excitatory to inhibitory neuron connections in supragranular layers of human neocortex

ELIFE

IF0

2023-05-30

OAAI

Kim, Mean-Hwan; Radaelli, Cristina; Thomsen, Elliot R.; Monet, Deja; Chartrand, Thomas; Jorstad, Nikolas L.; Mahoney, Joseph T.; Taormina, Michael J.; Long, Brian; Baker, Katherine; Bakken, Trygve E.; Campagnola, Luke; Casper, Tamara; Clark, Michael; Dee, Nick; D'Orazi, Florence; Gamlin, Clare; Kalmbach, Brian E.; Kebede, Sara; Lee, Brian R.; Ng, Lindsay; Trinh, Jessica; Cobbs, Charles; Gwinn, Ryder P.; Keene, C. Dirk; Ko, Andrew L.; Ojemann, Jeffrey G.; Silbergeld, Daniel L.; Sorensen, Staci A.; Berg, Jim; Smith, Kimberly A.; Nicovich, Philip R.; Jarsky, Tim; Zeng, Hongkui; Ting, Jonathan T.; Levi, Boaz P.; Lein, Ed

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Multi-modal characterization and simulation of human epileptic circuitry

CELL REPORTS

IF6.9

2022-12-01

OAAI

Buchin, Anatoly; de Frates, Rebecca; Nandi, Anirban; Mann, Rusty; Chong, Peter; Ng, Lindsay; Miller, Jeremy; Hodge, Rebecca; Kalmbach, Brian; Bose, Soumita; Rutishauser, Ueli; McConoughey, Stephen; Lein, Ed; Berg, Jim; Sorensen, Staci; Gwinn, Ryder; Koch, Christof; Ting, Jonathan; Anastasslou, Costas A.

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Single-neuron models linking electrophysiology, morphology, and transcriptomics across cortical cell types (vol 40, 111176, 2022)

CELL REPORTS

IF6.9

2022-11-01

OAAI

Nandi, Anirban; Chartrand, Thomas; Van Geit, Werner; Buchin, Anatoly; Yao, Zizhen; Lee, Soo Yeun; Wei, Yina; Kalmbach, Brian; Lee, Brian; Lein, Ed; Berg, Jim; Sumbul, Uygar; Koch, Christof; Tasic, Bosiljka; Anastassiou, Costas A.

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Single-neuron models linking electrophysiology, morphology, and transcriptomics across cortical cell types

CELL REPORTS

IF6.9

2022-08-01

OAAI

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Signature morpho-electric, transcriptomic, and dendritic properties of human layer 5 neocortical pyramidal neurons

NEURON

IF15

2021-09-01

OAAI

Kalmbach, Brian E.; Hodge, Rebecca D.; Jorstad, Nikolas L.; Owen, Scott; de Frates, Rebecca; Yanny, Anna Marie; Dalley, Rachel; Mallory, Matt; Graybuck, Lucas T.; Radaelli, Cristina; Keene, C. Dirk; Gwinn, Ryder P.; Silbergeld, Daniel L.; Cobbs, Charles; Ojemann, Jeffrey G.; Ko, Andrew L.; Patel, Anoop P.; Ellenbogen, Richard G.; Bakken, Trygve E.; Daigle, Tanya L.; Dee, Nick; Lee, Brian R.; McGraw, Medea; Nicovich, Philip R.; Smith, Kimberly; Sorensen, Staci A.; Tasic, Bosiljka; Zeng, Hongkui; Koch, Christof; Lein, Ed S.; Ting, Jonathan T.

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Scaled, high fidelity electrophysiological, morphological, and transcriptomic cell characterization

ELIFE

IF0

2021-08-13

OAAI

Lee, Brian R.; Budzillo, Agata; Hadley, Kristen; Miller, Jeremy A.; Jarsky, Tim; Baker, Katherine; Hill, DiJon; Kim, Lisa; Mann, Rusty; Ng, Lindsay; Oldre, Aaron; Rajanbabu, Ram; Trinh, Jessica; Vargas, Sara; Braun, Thomas; Dalley, Rachel A.; Gouwens, Nathan W.; Kalmbach, Brian E.; Kim, Tae Kyung; Smith, Kimberly A.; Soler-Llavina, Gilberto; Sorensen, Staci; Tasic, Bosiljka; Ting, Jonathan T.; Lein, Ed; Zeng, Hongkui; Murphy, Gabe J.; Berg, Jim

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Enhancer viruses for combinatorial cell-subclass-specific labeling

NEURON

IF15

2021-05-01

OAAI

Graybuck, Lucas T.; Daigle, Tanya L.; Sedeno-Cortes, Adriana E.; Walker, Miranda; Kalmbach, Brian; Lenz, Garreck H.; Morin, Elyse; Thuc Nghi Nguyen; Garren, Emma; Bendrick, Jacqueline L.; Kim, Tae Kyung; Zhou, Thomas; Mortrud, Marty; Yao, Shenqin; Siverts, La' Akea; Larsen, Rachael; Gore, Bryan B.; Szelenyi, Eric R.; Trader, Cameron; Balaram, Pooja; van Velthoven, Cindy T. J.; Chiang, Megan; Mich, John K.; Dee, Nick; Goldy, Jeff; Cetin, Ali H.; Smith, Kimberly; Way, Sharon W.; Esposito, Luke; Yao, Zizhen; Gradinaru, Viviana; Sunkin, Susan M.; Lein, Ed; Levi, Boaz P.; Ting, Jonathan T.; Zeng, Hongkui; Tasic, Bosiljka

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Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex

CELL REPORTS

IF6.9

2021-03-01

OAAI

Mich, John K.; Graybuck, Lucas T.; Hess, Erik E.; Mahoney, Joseph T.; Kojima, Yoshiko; Ding, Yi; Somasundaram, Saroja; Miller, Jeremy A.; Kalmbach, Brian E.; Radaelli, Cristina; Gore, Bryan B.; Weed, Natalie; Omstead, Victoria; Bishaw, Yemeserach; Shapovalova, Nadiya, V; Martinez, Refugio A.; Fong, Olivia; Yao, Shenqin; Mortrud, Marty; Chong, Peter; Loftus, Luke; Bertagnolli, Darren; Goldy, Jeff; Casper, Tamara; Dee, Nick; Opitz-Araya, Ximena; Cetin, Ali; Smith, Kimberly A.; Gwinn, Ryder P.; Cobbs, Charles; Ko, Andrew L.; Ojemann, Jeffrey G.; Keene, C. Dirk; Silbergeld, Daniel L.; Sunkin, Susan M.; Gradinaru, Viviana; Horwitz, Gregory D.; Zeng, Hongkui; Tasic, Bosiljka; Lein, Ed S.; Ting, Jonathan T.; Levi, Boaz P.

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Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons

NATURE COMMUNICATIONS

IF15.7

2020-03-03

OAAI

Hodge, Rebecca D.; Miller, Jeremy A.; Novotny, Mark; Kalmbach, Brian E.; Ting, Jonathan T.; Bakken, Trygve E.; Aevermann, Brian D.; Barkan, Eliza R.; Berkowitz-Cerasano, Madeline L.; Cobbs, Charles; Diez-Fuertes, Francisco; Ding, Song-Lin; McCorrison, Jamison; Schork, Nicholas J.; Shehata, Soraya I.; Smith, Kimberly A.; Sunkin, Susan M.; Tran, Danny N.; Venepally, Pratap; Yanny, Anna Marie; Steemers, Frank J.; Phillips, John W.; Bernard, Amy; Koch, Christof; Lasken, Roger S.; Scheuermann, Richard H.; Lein, Ed S.

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h-Channels Contribute to Divergent Intrinsic Membrane Properties of Supragranular Pyramidal Neurons in Human versus Mouse Cerebral Cortex

NEURON

IF15

2018-12-01

105

OAAI

Kalmbach, Brian E.; Buchin, Anatoly; Long, Brian; Close, Jennie; Nandi, Anirban; Miller, Jeremy A.; Bakken, Trygve E.; Hodge, Rebecca D.; Chong, Peter; de Frates, Rebecca; Dai, Kael; Maltzer, Zoe; Nicovich, Philip R.; Keene, C. Dirk; Silbergeld, Daniel L.; Gwinn, Ryder P.; Cobbs, Charles; Ko, Andrew L.; Ojemann, Jeffrey G.; Koch, Christof; Anastassiou, Costas A.; Lein, Ed S.; Ting, Jonathan T.

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A robust ex vivo experimental platform for molecular-genetic dissection of adult human neocortical cell types and circuits

SCIENTIFIC REPORTS

IF3.9

2018-05-30

OAAI

Ting, Jonathan T.; Kalmbach, Brian; Chong, Peter; de Frates, Rebecca; Keene, C. Dirk; Gwinn, Ryder P.; Cobbs, Charles; Ko, Andrew L.; Ojemann, Jeffrey G.; Ellenbogen, Richard G.; Koch, Christof; Lein, Ed

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Research Directions