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J

Jose V. Lopez

nova southeastern university

36H-index
168Paper Count
5.8KCitation Count
Published Papers 40
Publication Date
A Haplotype-Resolved Genome Assembly of the Long-Spined Sea Urchin Diadema antillarum, a Keystone Caribbean Reef Herbivore
errGenes
IF2.8
err2026-07-29
err0
errOAAI
errAudrey J. Majeske; Juliet M. Wong; Carlos A. Farkas Pool; Jose M. Eirin-Lopez; Jose V. Lopez; Walter Wolfsberger; Nikolaos V. Schizas; Alondra M. Díaz-Lameiro; Stephanie O. Castro-Márquez; Kenneth Hilkert; Alejandro J. Mercado Capote; Taras K. Oleksyk
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Transcriptional profiles of Microcystis reveal gene expression shifts that promote bloom persistence in in situ mesocosms
err2025-01-07
err0
errOAAI
errKrausfeldt, Lauren E.; Samuel, Paisley S.; Smith, Robert P.; Urakawa, Hidetoshi; Rosen, Barry H.; Colwell, Rita R.; Lopez, Jose V.
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Supragingival Plaque Microbiomes in a Diverse South Florida Population
err2024-09-21
err0
errOAAI
errDemehri, Sharlene; Vardar, Saynur; Godoy, Cristina; Lopez, Jose V.; Samuel, Paisley; Kawai, Toshihisa; Ozga, Andrew T.
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Microbial diversity, genomics, and phage-host interactions of cyanobacterial harmful algal blooms
err2024-07-23
err3
errOAAI
errKrausfeldt, Lauren E.; Shmakova, Elizaveta; Lee, Hyo Won; Mazzei, Viviana; Loftin, Keith A.; Smith, Robert P.; Karwacki, Emily; Fortman, P. Eric; Rosen, Barry H.; Urakawa, Hidetoshi; Dadlani, Manoj; Colwell, Rita R.; Lopez, Jose V.
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Morphological and transcriptional effects of crude oil and dispersant exposure on the marine sponge Cinachyrella alloclada
err2023-06-01
err3
errOAAI
errDesplat, Yvain; Warner, Jacob F.; Blake, Emily J.; Vijayan, Nidhi; Cuvelier, Marie; Blackwelder, Patricia; Lopez, Jose, V
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Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment
err2022-04-05
err22
PREAI
errBaker, Lydia J.; Freed, Lindsay L.; Easson, Cole G.; Lopez, Jose V.; Fenolio, Dante; Sutton, Tracey T.; Nyholm, Spencer V.; Hendry, Tory A.
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Why sequence all eukaryotes?
err2022-01-18
err49
errOAAI
errBlaxter, Mark; Archibald, John M.; Childers, Anna K.; Coddington, Jonathan A.; Crandall, Keith A.; Di Palma, Federica; Durbin, Richard; Edwards, Scott V.; Graves, Jennifer A. M.; Hackett, Kevin J.; Hall, Neil; Jarvis, Erich D.; Johnson, Rebecca N.; Karlsson, Elinor K.; Kress, W. John; Kuraku, Shigehiro; Lawniczak, Mara K. N.; Lindblad-Toh, Kerstin; Lopez, Jose V.; Moran, Nancy A.; Robinson, Gene E.; Ryder, Oliver A.; Shapiro, Beth; Soltis, Pamela S.; Warnow, Tandy; Zhang, Guojie; Lewin, Harris A.
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The Earth BioGenome Project 2020: Starting the clock
err2022-01-18
err134
errOAAI
errLewin, Harris A.; Richards, Stephen; Aiden, Erez Lieberman; Allende, Miguel L.; Archibald, John M.; Balint, Miklos; Barker, Katharine B.; Baumgartner, Bridget; Belov, Katherine; Bertorelle, Giorgio; Blaxter, Mark L.; Cai, Jing; Caperello, Nicolette D.; Carlson, Keith; Castilla-Rubio, Juan Carlos; Chaw, Shu-Miaw; Chen, Lei; Childers, Anna K.; Coddington, Jonathan A.; Conde, Dalia A.; Corominas, Montserrat; Crandall, Keith A.; Crawford, Andrew J.; DiPalma, Federica; Durbin, Richard; Ebenezer, ThankGod E.; Edwards, Scott V.; Fedrigo, Olivier; Flicek, Paul; Formenti, Giulio; Gibbs, Richard A.; Gilbert, M. Thomas P.; Goldstein, Melissa M.; Graves, Jennifer Marshall; Greely, Henry T.; Grigoriev, Igor V.; Hackett, Kevin J.; Hall, Neil; Haussler, David; Helgen, Kristofer M.; Hogg, Carolyn J.; Isobe, Sachiko; Jakobsen, Kjetill Sigurd; Janke, Axel; Jarvis, Erich D.; Johnson, Warren E.; Jones, Steven J. M.; Karlsson, Elinor K.; Kersey, Paul J.; Kim, Jin-Hyoung; Kress, W. John; Kuraku, Shigehiro; Lawniczak, Mara K. N.; Leebens-Mack, James H.; Li, Xueyan; Lindblad-Toh, Kerstin; Liu, Xin; Lopez, Jose V.; Marques-Bonet, Tomas; Mazard, Sophie; Mazet, Jonna A. K.; Mazzoni, Camila J.; Myers, Eugene W.; O'Neill, Rachel J.; Paez, Sadye; Park, Hyun; Robinson, Gene E.; Roquet, Cristina; Ryder, Oliver A.; Sabir, Jamal S. M.; Shaffer, H. Bradley; Shank, Timothy M.; Sherkow, Jacob S.; Soltis, Pamela S.; Tang, Boping; Tedersoo, Leho; Uliano-Silva, Marcela; Wang, Kun; Wei, Xiaofeng; Wetzer, Regina; Wilson, Julia L.; Xu, Xun; Yang, Huanming; Yoder, Anne D.; Zhang, Guojie
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Standards recommendations for the Earth BioGenome Project
err2022-01-18
err40
errOAAI
errLawniczak, Mara K. N.; Durbin, Richard; Flicek, Paul; Lindblad-Toh, Kerstin; Wei, Xiaofeng; Archibald, John M.; Baker, William J.; Belov, Katherine; Blaxter, Mark L.; Bonet, Tomas Marques; Childers, Anna K.; Coddington, Jonathan A.; Crandall, Keith A.; Crawford, Andrew J.; Davey, Robert P.; Di Palma, Federica; Fang, Qi; Haerty, Wilfried; Hall, Neil; Hoff, Katharina J.; Howe, Kerstin; Jarvis, Erich D.; Johnson, Warren E.; Johnson, Rebecca N.; Kersey, Paul J.; Liu, Xin; Lopez, Jose Victor; Myers, Eugene W.; Pettersson, Olga Vinnere; Phillippy, Adam M.; Poelchau, Monica F.; Pruitt, Kim D.; Rhie, Arang; Castilla-Rubio, Juan Carlos; Sahu, Sunil Kumar; Salmon, Nicholas A.; Soltis, Pamela S.; Swarbreck, David; Thibaud-Nissen, Francoise; Wang, Sibo; Wegrzyn, Jill L.; Zhang, Guojie; Zhang, He; Lewin, Harris A.; Richards, Stephen
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Holo-Transcriptome Sequences From the Tropical Marine Sponge Cinachyrella alloclada
err2021-12-07
err1
PREAI
errDesplat, Yvain; Warner, Jacob F.; Lopez, Jose, V
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Microbiome Analyses Demonstrate Specific Communities Within Five Shark Species
err2021-02-11
err16
errOAAI
errStoro, Rachael; Easson, Cole; Shivji, Mahmood; Lopez, Jose V.
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Characterization of the microbiome and bioluminescent symbionts across life stages of Ceratioid Anglerfishes of the Gulf of Mexico
err2019-09-10
err19
errOAAI
errFreed, Lindsay L.; Easson, Cole; Baker, Lydia J.; Fenolio, Dante; Sutton, Tracey T.; Khan, Yasmin; Blackwelder, Patricia; Hendry, Tory A.; Lopez, Jose, V
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Inevitable future: space colonization beyond Earth with microbes first
err2019-08-22
err19
errOAAI
errLopez, Jose, V; Peixoto, Raquel S.; Rosado, Alexandre S.
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Multiple Facets of Marine Invertebrate Conservation Genomics
err2019-02-15
err17
errOAAI
errLopez, Jose V.; Kamel, Bishoy; Medina, Monica; Collins, Timothy; Baums, Iliana B.
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Ongoing Transposon-Mediated Genome Reduction in the Luminous Bacterial Symbionts of Deep-Sea Ceratioid Anglerfishes
errMBIO
IF4.7
err2018-07-05
err41
errOAAI
errHendry, Tory A.; Freed, Lindsay L.; Fader, Dana; Fenolio, Dante; Sutton, Tracey T.; Lopez, Jose V.
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Culture-independent Characterization of the Microbiome of Healthy Pulp
err2018-07-01
err21
PREAI
errWidmer, Christopher; Skutas, Jorie; Easson, Cole; Lopez, Jose V.; Torneck, Calvin; Flax, Michael; Sayin, Taner Cem
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Bleaching events regulate shifts from corals to excavating sponges in algae-dominated reefs
err2017-12-01
err36
PREAI
errChaves-Fonnegra, Andia; Riegl, Bernhard; Zea, Sven; Lopez, Jose V.; Smith, Tyler; Brandt, Marilyn; Gilliam, David S.
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