arrow
Back
T

Thomas Schiex

Université de Toulouse

36H-index
180Paper Count
4.9KCitation Count
Published Papers 21
Publication Date
A Generative Neuro-Symbolic AI for Protein Sequence Design
err2026-07-31
err0
errOAAI
errMarianne Defresne; Delphine Dessaux; Samuel Buchet; Lucie Barthe; Liza Ammar-Khodja; Bessam Azizi; Valentin Durante; Gianluca Cioci; Simon de Givry; Alain Roussel; Luis F. Garcia-Alles; Thomas Schiex; Sophie Barbe
errShare
errSave
Promiscuous structural cross-compatibilities between major shell components of Klebsiella pneumoniae bacterial microcompartments
err2025-05-07
err0
errOAAI
errBarthe, Lucie; Balestrino, Damien; Azizi, Bessam; Dessaux, Delphine; Soldan, Vanessa; Esque, Jeremy; Schiex, Thomas; Barbe, Sophie; Garcia-Alles, Luis F.
errShare
errSave
Intracellular Salmonella Paratyphi A is motile and differs in the expression of flagella-chemotaxis, SPI-1 and carbon utilization pathways in comparison to intracellular S. Typhimurium
err2022-04-05
err6
errOAAI
errCohen, Helit; Hoede, Claire; Scharte, Felix; Coluzzi, Charles; Cohen, Emiliano; Shomer, Inna; Mallet, Ludovic; Holbert, Sebastien; Serre, Remy Felix; Schiex, Thomas; Virlogeux-Payant, Isabelle; Grassl, Guntram A.; Hensel, Michael; Chiapello, Helene; Gal-Mor, Ohad
errShare
errSave
Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase
err2021-09-24
err17
errOAAI
errYagi, Sota; Padhi, Aditya K.; Vucinic, Jelena; Barbe, Sophie; Schiex, Thomas; Nakagawa, Reiko; Simoncini, David; Zhang, Kam Y. J.; Tagami, Shunsuke
errShare
errSave
Iterated local search with partition crossover for computational protein design
err2021-07-17
err1
errOAAI
errBeuvin, Francois; de Givry, Simon; Schiex, Thomas; Verel, Sebastien; Simoncini, David
errShare
errSave
Variable Neighborhood Search with Cost Function Networks To Solve Large Computational Protein Design Problems
err2018-10-31
err4
errOAAI
errCharpentier, Antoine; Mignon, David; Barbe, Sophie; Cortes, Juan; Schiex, Thomas; Simonson, Thomas; Allouche, David
errShare
errSave
Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes
err2017-06-08
err129
errOAAI
errBlanc-Mathieu, Romain; Perfus-Barbeoch, Laetitia; Aury, Jean-Marc; Da Rocha, Martine; Gouzy, Jerome; Sallet, Erika; Martin-Jimenez, Cristina; Bailly-Bechet, Marc; Castagnone-Sereno, Philippe; Flot, Jean-Francois; Kozlowski, Djampa K.; Cazareth, Julie; Couloux, Arnaud; Da Silva, Corinne; Guy, Julie; Kim-Jo, Yu-Jin; Rancurel, Corinne; Schiex, Thomas; Abad, Pierre; Wincker, Patrick; Danchin, Etienne G. J.
errShare
errSave
Tractability-preserving transformations of global cost functions
err2016-09-01
err9
errOAAI
errAllouche, David; Bessiere, Christian; Boizumault, Patrice; de Givry, Simon; Gutierrez, Patricia; Lee, Jimmy H. M.; Leung, Ka Lun; Loudni, Samir; Metivier, Jean-Philippe; Schiex, Thomas; Wu, Yi
errShare
errSave
Fast search algorithms for computational protein design
err2016-02-02
err27
errOAAI
errTraore, Seydou; Roberts, Kyle E.; Allouche, David; Donald, Bruce R.; Andre, Isabelle; Schiex, Thomas; Barbe, Sophie
errShare
errSave
Guaranteed Discrete Energy Optimization on Large Protein Design Problems
err2015-11-25
err49
PREAI
errSimoncini, David; Allouche, David; de Givry, Simon; Delmas, Celine; Barbe, Sophie; Schiex, Thomas
errShare
errSave
Computational protein design as an optimization problem
err2014-07-01
err55
errOAAI
errAllouche, David; Andre, Isabelle; Barbe, Sophie; Davies, Jessica; de Givry, Simon; Katsirelos, George; O'Sullivan, Barry; Prestwich, Steve; Schiex, Thomas; Traore, Seydou
errShare
errSave
Next-Generation Annotation of Prokaryotic Genomes with EuGene-P: Application to Sinorhizobium meliloti 2011
err2013-04-18
err76
errOAAI
errSallet, Erika; Roux, Brice; Sauviac, Laurent; Jardinaud, Marie-Francoise; Carrere, Sebastien; Faraut, Thomas; de Carvalho-Niebel, Fernanda; Gouzy, Jerome; Gamas, Pascal; Capela, Delphine; Bruand, Claude; Schiex, Thomas
errShare
errSave
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita
err2008-07-27
err1.1K
errOAAI
errAbad, Pierre; Gouzy, Jerome; Aury, Jean-Marc; Castagnone-Sereno, Philippe; Danchin, Etienne G. J.; Deleury, Emeline; Perfus-Barbeoch, Laetitia; Anthouard, Veronique; Artiguenave, Francois; Blok, Vivian C.; Caillaud, Marie-Cecile; Coutinho, Pedro M.; Dasilva, Corinne; De Luca, Francesca; Deau, Florence; Esquibet, Magali; Flutre, Timothe; Goldstone, Jared V.; Hamamouch, Noureddine; Hewezi, Tarek; Jaillon, Olivier; Jubin, Claire; Leonetti, Paola; Magliano, Marc; Maier, Tom R.; Markov, Gabriel V.; McVeigh, Paul; Pesole, Graziano; Poulain, Julie; Robinson-Rechavi, Marc; Sallet, Erika; Segurens, Beatrice; Steinbach, Delphine; Tytgat, Tom; Ugarte, Edgardo; van Ghelder, Cyril; Veronico, Pasqua; Baum, Thomas J.; Blaxter, Mark; Bleve-Zacheo, Teresa; Davis, Eric L.; Ewbank, Jonathan J.; Favery, Bruno; Grenier, Eric; Henrissat, Bernard; Jones, John T.; Laudet, Vincent; Maule, Aaron G.; Quesneville, Hadi; Rosso, Marie-Noelle; Schiex, Thomas; Smant, Geert; Weissenbach, Jean; Wincker, Patrick
errShare
errSave
High resolution radiation hybrid maps of bovine chromosomes 19 and 29: comparison with the bovine genome sequence assembly
err2007-09-04
err17
errOAAI
errPrasad, Aparna; Schiex, Thomas; Mckay, Stephanie; Murdoch, Brenda; Wang, Zhiquan; Womack, James E.; Stothard, Paul; Moore, Stephen S.
errShare
errSave
Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome
err2007-01-01
err12
errOAAI
errAubourg, Sebastien; Martin-Magniette, Marie-Laure; Brunaud, Veronique; Taconnat, Ludivine; Bitton, Frederique; Balzergue, Sandrine; Jullien, Pauline E.; Ingouff, Mathieu; Thareau, Vincent; Schiex, Thomas; Lecharny, Alain; Renou, Jean-Pierre
errShare
errSave
Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes
err2006-10-03
err264
errOAAI
errCannon, Steven B.; Sterck, Lieven; Rombauts, Stephane; Sato, Shusei; Cheung, Foo; Gouzy, Jerome; Wang, Xiaohong; Mudge, Joann; Vasdewani, Jayprakash; Scheix, Thomas; Spannagl, Manuel; Monaghan, Erin; Nicholson, Christine; Humphray, Sean J.; Schoof, Heiko; Mayer, Klaus F. X.; Rogers, Jane; Quetier, Francis; Oldroyd, Giles E.; Debelle, Frederic; Cook, Douglas R.; Retzel, Ernest F.; Roe, Bruce A.; Town, Christopher D.; Tabata, Satoshi; Van de Peer, Yves; Young, Nevin D.
errShare
errSave
errShare
errSave