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S

Sergio Marco Salas

Stockholm University

13H-index
60Paper Count
1.1KCitation Count
Published Papers 18
Publication Date
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Identifying 3D signal overlaps in spatial transcriptomics data with ovrlpy
errNature Biotechnology
IF41.7
err2026-02-10
err0
PREAI
errSebastian Tiesmeyer; Niklas Müller-Bötticher; Alexander Malt; Leyao Ma; Sergio Marco-Salas; Paul Kiessling; Paul Horn; Adrien Guillot; Louis B. Kuemmerle; Frank Tacke; Fabian J. Theis; Christoph Kuppe; Mats Nilsson; Roland Eils; Brian Long; Naveed Ishaque
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Spatial single-cell atlas reveals regional variations in healthy and diseased human lung
errNature Communications
IF15.7
err2025-11-05
err0
errOAAI
errAlexandra B. Firsova; Sergio Marco Salas; Louis B. Kuemmerle; Xesús M. Abalo; Alexandros Sountoulidis; Ludvig Larsson; Krishnaa T. Mahbubani; Jonas Theelke; Zaneta Andrusivova; Leire Alonso Galicia; Andreas Liontos; Tamás Balassa; Ferenc Kovacs; Peter Horvath; Yuexin Chen; Janine Gote-Schniering; Mircea-Gabriel Stoleriu; Jürgen Behr; Kerstin B. Meyer; Wim Timens; Herbert B. Schiller; Malte D. Luecken; Fabian J. Theis; Joakim Lundeberg; Mats Nilsson; Martijn C. Nawijn; Christos Samakovlis
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Spatiotemporal gene expression and cellular dynamics of the developing human heart
errNature Genetics
IF29
err2025-10-29
err0
errOAAI
errEnikő Lázár; Raphaël Mauron; Žaneta Andrusivová; Julia Foyer; Mengxiao He; Ludvig Larsson; Nick Shakari; Sergio Marco Salas; Christophe Avenel; Sanem Sariyar; Jan Niklas Hansen; Marco Vicari; Paulo Czarnewski; Emelie Braun; Xiaofei Li; Olaf Bergmann; Christer Sylvén; Emma Lundberg; Sten Linnarsson; Mats Nilsson; Erik Sundström; Igor Adameyko; Joakim Lundeberg
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Oligodendroglia vulnerability in the human dorsal striatum in Parkinson's disease
errACTA NEUROPATHOLOGICA
IF9.3
err2025-05-05
err0
errOAAI
errBarba-Reyes, JM; Harder, L; Salas, SM; Jaisa-aad, M; Muñoz-Castro, C; Garma, LD; Rafati, N; Nilsson, M; Hyman, BT; Serrano-Pozo, A; Muñoz-Manchado, AB
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High-parametric protein maps reveal the spatial organization in early-developing human lung
errNATURE COMMUNICATIONS
IF15.7
err2024-10-30
err0
errOAAI
errSariyar, Sanem; Sountoulidis, Alexandros; Hansen, Jan Niklas; Salas, Sergio Marco; Casals, Anna Martinez; Navarro, Frederic Ballllosera; Andrusivova, Zaneta; Czarnewski, Paulo; Linnarsson, Sten; Nilsson, Mats; Sundstrom, Erik; Samakovlis, Christos; Lundberg, Emma; Ayoglu, Burcu
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Open-source, high-throughput targeted in situ transcriptomics for developmental and tissue biology
errDEVELOPMENT
IF3.6
err2024-08-29
err0
errOAAI
errLee, Hower; Langseth, Christoffer Mattsson; Salas, Sergio Marco; Sariyar, Sanem; Metousis, Andreas; Rueda-Alana, Eneritz; Bekiari, Christina; Lundberg, Emma; Garcia-Moreno, Fernando; Grillo, Marco; Nilsson, Mats
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Interneuron diversity in the human dorsal striatum
errNATURE COMMUNICATIONS
IF15.7
err2024-07-22
err2
errOAAI
errGarma, Leonardo D.; Harder, Lisbeth; Barba-Reyes, Juan M.; Marco Salas, Sergio; Diez-Salguero, Monica; Nilsson, Mats; Serrano-Pozo, Alberto; Hyman, Bradley T.; Munoz-Manchado, Ana B.
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A community effort to track commercial single-cell and spatial 'omic technologies and business trends
errNATURE BIOTECHNOLOGY
IF41.7
err2024-07-17
err0
PREAI
errDe Jonghe, Joachim; Opzoomer, James W.; Vilas-Zornoza, Amaia; Crane, Peter; Nilges, Benedikt S.; Vicari, Marco; Lee, Hower; Lara-Astiaso, David; Gross, Torsten; Morf, Joerg; Schneider, Kim; Cudini, Juliana; Ramos-Mucci, Lorenzo; Mooijman, Dylan; Tiklova, Katarina; Salas, Sergio Marco; Langseth, Christoffer Mattsson; Kashikar, Nachiket D.; Roberts, Charles E. S.; Lundeberg, Joakim; Nilsson, Mats; Shalek, Alex K.; Cribbs, Adam P.; Taylor-King, Jake P.
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errSave
Padlock Probe-Based Targeted In Situ Sequencing: Overview of Methods and Applications
errannual review of genetics
IF7.9
err2023-08-25
err5
errOAAI
errMagoulopoulou, Anastasia; Salas, Sergio Marco; Tiklova, Katarina; Samuelsson, Erik Reinhold; Hilscher, Markus M.; Nilsson, Mats
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errSave
THE LANDSCAPE OF TUMOR CELL STATES AND SPATIAL ORGANIZATION IN H3-K27M MUTANT DIFFUSE MIDLINE GLIOMA ACROSS AGE AND LOCATION
errNEURO-ONCOLOGY
IF13.4
err2023-06-12
err0
errOAAI
errLiu, Ilon; Jiang, Li; Samuelsson, Erik; Salas, Sergio Marco; Beck, Alexander; Hack, Olivia; Jeong, Daeun; Shaw, McKenzie; Englinger, Bernhard; LaBelle, Jenna; Mire, Hafsa; Madlener, Sibylle; Mayr, Lisa; Quezada, Michael; Trissal, Maria; Panditharatna, Eshini; Ernst, Kati; Vogelzang, Jayne; Gatesman, Taylor; Halbert, Matthew; Palova, Hana; Vesela, Petra; Sterba, Jaroslav; Slaby, Ondrej; Geyeregger, Rene; Diaz, Aaron; Findlay, Izac; Dun, Matt; Resnick, Adam; Suva, Mario; Jones, David; Agnihotri, Sameer; Ostlin, Jessica; Koschmann, Carl; Haberler, Christine; Czech, Thomas; Slavc, Irene; Cotter, Jennifer; Ligon, Keith; Alexandrescu, Sanda; Yung, W. K. Alfred; Arrillaga-Romany, Isabel; Gojo, Johannes; Monje, Michelle; Nilsson, Mats; Filbin, Mariella
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Identifying the neurodevelopmental and psychiatric signatures of genomic disorders associated with intellectual disability: a machine learning approach
errMOLECULAR AUTISM
IF5.5
err2023-05-23
err2
errOAAI
errDonnelly, Nicholas; Cunningham, Adam; Salas, Sergio Marco; Bracher-Smith, Matthew; Chawner, Samuel; Stochl, Jan; Ford, Tamsin; Raymond, F. Lucy; Escott-Price, Valentina; van den Bree, Marianne B. M.
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A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung
errNATURE CELL BIOLOGY
IF19.1
err2023-01-16
err20
errOAAI
errSountoulidis, Alexandros; Marco Salas, Sergio; Braun, Emelie; Avenel, Christophe; Bergenstrahle, Joseph; Theelke, Jonas; Vicari, Marco; Czarnewski, Paulo; Liontos, Andreas; Abalo, Xesus; Andrusivova, Zaneta; Mirzazadeh, Reza; Asp, Michaela; Li, Xiaofei; Hu, Lijuan; Sariyar, Sanem; Martinez Casals, Anna; Ayoglu, Burcu; Firsova, Alexandra; Michaelsson, Jakob; Lundberg, Emma; Waehlby, Carolina; Sundstroem, Erik; Linnarsson, Sten; Lundeberg, Joakim; Nilsson, Mats; Samakovlis, Christos
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The landscape of tumor cell states and spatial organization in H3-K27M mutant diffuse midline glioma across age and location
errNATURE GENETICS
IF31.8
err2022-12-05
err67
errOAAI
errLiu, Ilon; Jiang, Li; Samuelsson, Erik R.; Salas, Sergio Marco; Beck, Alexander; Hack, Olivia A.; Jeong, Daeun; Shaw, McKenzie L.; Englinger, Bernhard; LaBelle, Jenna; Mire, Hafsa M.; Madlener, Sibylle; Mayr, Lisa; Quezada, Michael A.; Trissal, Maria; Panditharatna, Eshini; Ernst, Kati J.; Vogelzang, Jayne; Gatesman, Taylor A.; Halbert, Matthew E.; Palova, Hana; Pokorna, Petra; Sterba, Jaroslav; Slaby, Ondrej; Geyeregger, Rene; Diaz, Aaron; Findlay, Izac J.; Dun, Matthew D.; Resnick, Adam; Suva, Mario L.; Jones, David T. W.; Agnihotri, Sameer; Svedlund, Jessica; Koschmann, Carl; Haberler, Christine; Czech, Thomas; Slavc, Irene; Cotter, Jennifer A.; Ligon, Keith L.; Alexandrescu, Sanda; Yung, W. K. Alfred; Arrillaga-Romany, Isabel; Gojo, Johannes; Monje, Michelle; Nilsson, Mats; Filbin, Mariella G.
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errSave
THE LANDSCAPE OF TUMOR CELL STATES AND SPATIAL ORGANIZATION IN H3-K27M MUTANT DIFFUSE MIDLINE GLIOMA ACROSS AGE AND LOCATION
errNEURO-ONCOLOGY
IF13.4
err2022-09-05
err2
errOAAI
errLiu, I; Jiang, L.; Samuelsson, E.; Marco Salas, S.; Hack, O.; Jeong, D.; Shaw, M.; Englinger, B.; LaBelle, J.; Ernst, K.; Palova, H.; Pokorna, P.; Sterba, J.; Slaby, O.; Geyeregger, R.; Jones, D.; Koschmann, C.; Svedlund, J.; Resnick, A.; Diaz, A.; Haberler, C.; Czech, T.; Slavc, I; Cotter, J.; Ligon, K.; Alexandrescu, S.; Yung, W.; Arrillaga-Romany, I; Suva, M.; Beck, A.; Gojo, J.; Monje, M.; Nilsson, M.; Filbin, M.
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errSave
Spatial Resolution of Mycobacterium tuberculosis Bacteria and Their Surrounding Immune Environments Based on Selected Key Transcripts in Mouse Lungs
errFRONTIERS IN IMMUNOLOGY
IF5.9
err2022-05-18
err8
errOAAI
errMagoulopoulou, Anastasia; Qian, Xiaoyan; Setiabudiawan, Todia Pediatama; Salas, Sergio Marco; Yokota, Chika; Rottenberg, Martin E.; Nilsson, Mats; Carow, Berit
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errSave
Direct RNA targeted in situ sequencing for transcriptomic profiling in tissue
errSCIENTIFIC REPORTS
IF3.9
err2022-05-13
err18
errOAAI
errLee, Hower; Salas, Sergio Marco; Gyllborg, Daniel; Nilsson, Mats
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errSave
Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissue (vol 48, e112, 2020)
errNUCLEIC ACIDS RESEARCH
IF13.1
err2021-07-31
err2
errOAAI
errGyllborg, Daniel; Langseth, Christoffer Mattsson; Qian, Xiaoyan; Choi, Eunkyoung; Salas, Sergio Marco; Hilscher, Markus M.; Lein, Ed S.; Nilsson, Mats
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errSave
Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissue
errNUCLEIC ACIDS RESEARCH
IF13.1
err2020-09-29
err124
errOAAI
errGyllborg, Daniel; Langseth, Christoffer Mattsson; Qian, Xiaoyan; Choi, Eunkyoung; Salas, Sergio Marco; Hilscher, Markus M.; Lein, Ed S.; Nilsson, Mats
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
B
Bradley T. Hyman
H-index: 187 · Papers: 1.1K
D
David Jones
H-index: 144 · Papers: 1.5K
R
Roland Eils
H-index: 138 · Papers: 1.1K
F
Fabian J. Theis
H-index: 125 · Papers: 1.1K
F
Frank Tacke
H-index: 124 · Papers: 1.4K
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