arrow
Back
B

Benjamin C. Hitz

Stanford University

26H-index
54Paper Count
1.2WCitation Count
Published Papers 19
Publication Date
The IGVF catalog-from genetic variation to function
err2025-12-01
err1
PREAI
errLi, Daofeng; Liu, Shane; Assis, Pedro R.; Li, Mingjie; Dong, Shengcheng; Whaling, Ian; Jolanki, Otto; Kagda, Meenakshi; Zhang, Wenjin; Macias-Velasco, Juan F.; Liu, Tianjie; Cody, Sarah; Antonacci-Fulton, Lucinda; Huang, Yuanhao; Liu, Jie; Montgomery, Michael T.; Zeiberg, Daniel; Jain, Shantanu; Pejaver, Vikas; Bergquist, Timothy; Chen, Yile; Radivojac, Predrag; Gersbach, Charles A.; Sherpa, Rintsen N.; Castro, Christopher P.; Boyle, Alan P.; Starita, Lea M.; Fowler, Douglas M.; Ahituv, Nadav; Dey, Kushal K.; Majoros, William H.; Reddy, Timothy E.; Craven, Mark; Sinha, Riya; Sverchkov, Yuriy; Cai, Xiangmeng; Nzima, Mpathi Z.; Calderwood, Michael A.; Rozowsky, Joel; Gerstein, Mark; Ma, Jian; Yue, Feng; Cherry, J. Michael; Love, Michael, I; Engreitz, Jesse M.; Hitz, Benjamin C.; Wang, Ting
errShare
errSave
Data navigation on the ENCODE portal
err2025-10-30
err0
errOAAI
errMeenakshi S. Kagda; Bonita Lam; Casey Litton; Corinn Small; Cricket A. Sloan; Emma Spragins; Forrest Tanaka; Ian Whaling; Idan Gabdank; Ingrid Youngworth; J. Seth Strattan; Jason Hilton; Jennifer Jou; Jessica Au; Jin-Wook Lee; Kalina Andreeva; Keenan Graham; Khine Lin; Matt Simison; Otto Jolanki; Paul Sud; Pedro Assis; Philip Adenekan; Stuart Miyasato; Weiwei Zhong; Yunhai Luo; Zachary Myers; J. Michael Cherry; Benjamin C. Hitz
errShare
errSave
Annotating and prioritizing human non-coding variants with RegulomeDB v.2
err2023-04-25
err40
errOAAI
errDong, Shengcheng; Zhao, Nanxiang; Spragins, Emma; Kagda, Meenakshi S.; Li, Mingjie; Assis, Pedro; Jolanki, Otto; Luo, Yunhai; Cherry, J. Michael; Boyle, Alan P.; Hitz, Benjamin C.
errShare
errSave
errShare
errSave
New developments on the Encyclopedia of DNA Elements (ENCODE) data portal
err2019-11-12
err422
errOAAI
errLuo, Yunhai; Hitz, Benjamin C.; Gabdank, Idan; Hilton, Jason A.; Kagda, Meenakshi S.; Lam, Bonita; Myers, Zachary; Sud, Paul; Jou, Jennifer; Lin, Khine; Baymuradov, Ulugbek K.; Graham, Keenan; Litton, Casey; Miyasato, Stuart R.; Strattan, J. Seth; Jolanki, Otto; Lee, Jin-Wook; Tanaka, Forrest Y.; Adenekan, Philip; O'Neill, Emma; Cherry, J. Michael
errShare
errSave
Prevention of data duplication for high throughput sequencing repositories
err2018-02-27
err5
errOAAI
errGabdank, Idan; Chan, Esther T.; Davidson, Jean M.; Hilton, Jason A.; Davis, Carrie A.; Baymuradov, Ulugbek K.; Narayanan, Aditi; Onate, Kathrina C.; Graham, Keenan; Miyasato, Stuart R.; Dreszer, Timothy R.; Strattan, J. Seth; Jolanki, Otto; Tanaka, Forrest Y.; Hitz, Benjamin C.; Sloan, Cricket A.; Cherry, J. Michael
errShare
errSave
The Encyclopedia of DNA elements (ENCODE): data portal update
err2017-11-06
err1.3K
errOAAI
errDavis, Carrie A.; Hitz, Benjamin C.; Sloan, Cricket A.; Chan, Esther T.; Davidson, Jean M.; Gabdank, Idan; Hilton, Jason A.; Jain, Kriti; Baymuradov, Ulugbek K.; Narayanan, Aditi K.; Onate, Kathrina C.; Graham, Keenan; Miyasato, Stuart R.; Dreszer, Timothy R.; Strattan, J. Seth; Jolanki, Otto; Tanaka, Forrest Y.; Cherry, J. Michael
errShare
errSave
Integration of new alternative reference strain genome sequences into the Saccharomyces genome database
err2016-06-01
err8
errOAAI
errSong, Giltae; Balakrishnan, Rama; Binkley, Gail; Costanzo, Maria C.; Dalusag, Kyla; Demeter, Janos; Engel, Stacia; Hellerstedt, Sage T.; Karra, Kalpana; Hitz, Benjamin C.; Nash, Robert S.; Paskov, Kelley; Sheppard, Travis; Skrzypek, Marek; Weng, Shuai; Wong, Edith; Cherry, J. Michael
errShare
errSave
Principles of metadata organization at the ENCODE data coordination center
err2016-03-15
err31
errOAAI
errHong, Eurie L.; Sloan, Cricket A.; Chan, Esther T.; Davidson, Jean M.; Malladi, Venkat S.; Strattan, J. Seth; Hitz, Benjamin C.; Gabdank, Idan; Narayanan, Aditi K.; Ho, Marcus; Lee, Brian T.; Rowe, Laurence D.; Dreszer, Timothy R.; Roe, Greg R.; Podduturi, Nikhil R.; Tanaka, Forrest; Hilton, Jason A.; Cherry, J. Michael
errShare
errSave
The Saccharomyces Genome Database Variant Viewer
err2015-11-17
err20
errOAAI
errSheppard, Travis K.; Hitz, Benjamin C.; Engel, Stacia R.; Song, Giltae; Balakrishnan, Rama; Binkley, Gail; Costanzo, Maria C.; Dalusag, Kyla S.; Demeter, Janos; Hellerstedt, Sage T.; Karra, Kalpana; Nash, Robert S.; Paskov, Kelley M.; Skrzypek, Marek S.; Weng, Shuai; Wong, Edith D.; Cherry, J. Michael
errShare
errSave
ENCODE data at the ENCODE portal
err2015-11-02
err389
errOAAI
errSloan, Cricket A.; Chan, Esther T.; Davidson, Jean M.; Malladi, Venkat S.; Strattan, J. Seth; Hitz, Benjamin C.; Gabdank, Idan; Narayanan, Aditi K.; Ho, Marcus; Lee, Brian T.; Rowe, Laurence D.; Dreszer, Timothy R.; Roe, Greg; Podduturi, Nikhil R.; Tanaka, Forrest; Hong, Eurie L.; Cherry, J. Michael
errShare
errSave
Ontology application and use at the ENCODE DCC
err2015-03-16
err31
errOAAI
errMalladi, Venkat S.; Erickson, Drew T.; Podduturi, Nikhil R.; Rowe, Laurence D.; Chan, Esther T.; Davidson, Jean M.; Hitz, Benjamin C.; Ho, Marcus; Lee, Brian T.; Miyasato, Stuart; Roe, Gregory R.; Simison, Matt; Sloan, Cricket A.; Strattan, J. Seth; Tanaka, Forrest; Kent, W. James; Cherry, J. Michael; Hong, Eurie L.
errShare
errSave
InterMOD: integrated data and tools for the unification of model organism research (vol 3, 1802, 2013)
err2013-11-22
err0
errOAAI
errSullivan, Julie; Karra, Kalpana; Moxon, Sierra A. T.; Vallejos, Andrew; Motenko, Howie; Wong, J. D.; Aleksic, Jelena; Balakrishnan, Rama; Binkley, Gail; Harris, Todd; Hitz, Benjamin; Jayaraman, Pushkala; Lyne, Rachel; Neuhauser, Steven; Pich, Christian; Smith, Richard N.; Quang Trinh; Cherry, J. Michael; Richardson, Joel; Stein, Lincoln; Twigger, Simon; Westerfield, Monte; Worthey, Elizabeth; Micklem, Gos
errShare
errSave
Saccharomyces genome database provides new regulation data
err2013-11-21
err53
errOAAI
errCostanzo, Maria C.; Engel, Stacia R.; Wong, Edith D.; Lloyd, Paul; Karra, Kalpana; Chan, Esther T.; Weng, Shuai; Paskov, Kelley M.; Roe, Greg R.; Binkley, Gail; Hitz, Benjamin C.; Cherry, Michael
errShare
errSave
InterMOD: integrated data and tools for the unification of model organism research
err2013-05-08
err21
errOAAI
errSullivan, Julie; Karra, Kalpana; Moxon, Sierra A. T.; Vallejos, Andrew; Motenko, Howie; Wong, J. D.; Aleksic, Jelena; Balakrishnan, Rama; Binkley, Gail; Harris, Todd; Hitz, Benjamin; Jayaraman, Pushkala; Lyne, Rachel; Neuhauser, Steven; Pich, Christian; Smith, Richard N.; Quang Trinh; Cherry, J. Michael; Richardson, Joel; Stein, Lincoln; Twigger, Simon; Westerfield, Monte; Worthey, Elizabeth; Micklem, Gos
errShare
errSave
The YeastGenome app: the Saccharomyces Genome Database at your fingertips
err2013-02-07
err7
errOAAI
errWong, Edith D.; Karra, Kalpana; Hitz, Benjamin C.; Hong, Eurie L.; Cherry, J. Michael
errShare
errSave
Annotation of functional variation in personal genomes using RegulomeDB
err2012-09-05
err2.3K
errOAAI
errBoyle, Alan P.; Hong, Eurie L.; Hariharan, Manoj; Cheng, Yong; Schaub, Marc A.; Kasowski, Maya; Karczewski, Konrad J.; Park, Julie; Hitz, Benjamin C.; Weng, Shuai; Cherry, J. Michael; Snyder, Michael
errShare
errSave
YeastMine-an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit
err2012-02-13
err224
errOAAI
errBalakrishnan, Rama; Park, Julie; Karra, Kalpana; Hitz, Benjamin C.; Binkley, Gail; Hong, Eurie L.; Sullivan, Julie; Micklem, Gos; Cherry, J. Michael
errShare
errSave
New mutant phenotype data curation system in the Saccharomyces Genome Database
err2009-03-26
err19
errOAAI
errCostanzo, Maria C.; Skrzypek, Marek S.; Nash, Robert; Wong, Edith; Binkley, Gail; Engel, Stacia R.; Hitz, Benjamin; Hong, Eurie L.; Cherry, J. Michael
errShare
errSave