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Phillip A. Cleves

University of California

18H-index
45Paper Count
1.3KCitation Count
Published Papers 24
Publication Date
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Co-option of lysosomal machinery shapes the evolution of the intracellular photosymbiosis supporting coral reefs
errCell
IF42.5
err2026-07-01
err0
PREAI
errShumpei Maruyama; Catherine F. Henderson; Natalie Swinhoe; Griffin P. Kowalewski; Emily K. Meier; Ty R. Engelke; Phillip A. Cleves
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errSave
Deciphering mechanical determinants of morphological evolution
errCell
IF42.5
err2026-03-20
err0
errOAAI
errRichard Bailleul; Nicolas Cuny; Diana Khoromskaia; Soham Basu; Giulia Bergamini; Paolo Cucurachi; Florian Gabler; Sebastian Rupp; Annika Guse; Camille Curantz; Natalie Swinhoe; Phillip A. Cleves; Jamie Craggs; Sosuke Fujita; Yu-ichiro Nakajima; Petrus J. Steenbergen; Alba Diz-Muñoz; Guillaume Salbreux; Aissam Ikmi
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errSave
Efficient genome editing using CRISPR–Cas9 in reef-building corals
errNature Protocols
IF16
err2026-03-02
err0
PREAI
errAmanda I. Tinoco; Catherine F. Henderson; Emily K. Meier; Natalie Swinhoe; Phillip A. Cleves
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errSave
Global coral genomic vulnerability explains recent reef losses
errNature Communications
IF15.7
err2025-12-19
err0
errOAAI
errOliver Selmoni; Phillip A. Cleves; Moises Exposito-Alonso
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errSave
The Biodiversity Cell Atlas: mapping the tree of life at cellular resolution
errNature
IF48.5
err2025-09-24
err0
PREAI
errArnau Sebé-Pedrós; Amos Tanay; Mara K. N. Lawniczak; Detlev Arendt; Stein Aerts; John Archibald; Maria Ina Arnone; Mark Blaxter; Phillip Cleves; Susana M. Coelho; Mafalda Dias; Casey Dunn; Anamaria Elek; Jonathan Frazer; Toni Gabaldón; Jesse Gillis; Xavier Grau-Bové; Roderic Guigó; Oliver Hobert; Jaime Huerta-Cepas; Manuel Irimia; Allon Klein; Harris Lewin; Christopher J. Lowe; Heather Marlow; Jacob M. Musser; László G. Nagy; Sebastián R. Najle; Lior Pachter; Sadye Paez; Irene Papatheodorou; Michael J. Passalacqua; Nikolaus Rajewsky; Seung Y. Rhee; Thomas A. Richards; Tatjana Sauka-Spengler; Lauren M. Saunders; Eve Seuntjens; Jordi Solana; Yuyao Song; Ulrich Technau; Bo Wang
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Photosynthesis and other factors affecting the establishment and maintenance of cnidarian-dinoflagellate symbiosis
errPHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
IF4.7
err2024-03-18
err1
errOAAI
errTran, Cawa; Rosenfield, Gabriel R.; Cleves, Phillip A.; Krediet, Cory J.; Paul, Maitri R.; Clowez, Sophie; Grossman, Arthur R.; Pringle, John R.
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Finding genes and pathways that underlie coral adaptation
errTRENDS IN GENETICS
IF16.3
err2024-03-01
err4
PREAI
errSelmoni, Oliver; Bay, Line K.; Exposito-Alonso, Moises; Cleves, Phillip A.
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errSave
Role of the bicarbonate transporter SLC4γ in stony-coral skeleton formation and evolution
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-06-05
err8
errOAAI
errTinoco, Amanda I.; Mitchison-Field, Lorna M. Y.; Bradford, Jacob; Renicke, Christian; Perrin, Dimitri; Bay, Line K.; Pringle, John R.; Cleves, Phillip A.
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Molecular insights into the Darwin paradox of coral reefs from the sea anemone Aiptasia
errSCIENCE ADVANCES
IF12.5
err2023-03-17
err17
errOAAI
errCui, Guoxin; Konciute, Migle K.; Ling, Lorraine; Esau, Luke; Raina, Jean -Baptiste; Han, Baoda; Salazar, Octavio R.; Presnell, Jason S.; Raedecker, Nils; Zhong, Huawen; Menzies, Jessica; Cleves, Phillip A.; Liew, Yi Jin; Krediet, Cory J.; Sawiccy, Val; Cziesielski, Maha J.; Guagliardo, Paul; Bougoure, Jeremy; Pernice, Mathieu; Hirt, Heribert; Voolstra, Christian R.; Weis, Virginia M.; Pringle, John R.; Aranda, Manuel
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Comparative biology and ecology of apicomplexans and dinoflagellates: a unique meeting of minds and biology
errTrends in Parasitology
IF6.6
err2022-12-01
err1
errOAAI
errWaller, Ross F.; Alves-de-Souza, Catharina; Cleves, Phillip A.; Janouskovec, Jan; Kayal, Ehsan; Krueger, Thomas; Szymczak, Jeremy; Yamada, Norico; Guillou, Laure
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Life on the edge: Hawaiian model for coral evolution
errLIMNOLOGY AND OCEANOGRAPHY
IF3.7
err2022-07-11
err3
PREAI
errBhattacharya, Debashish; Stephens, Timothy G.; Tinoco, Amanda I.; Richmond, Robert H.; Cleves, Phillip A.
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errSave
Metabolomic shifts associated with heat stress in coral holobionts
errSCIENCE ADVANCES
IF12.5
err2021-01-01
err52
errOAAI
errWilliams, Amanda; Chiles, Eric N.; Conetta, Dennis; Pathmanathan, Jananan S.; Cleves, Phillip A.; Putnam, Hollie M.; Su, Xiaoyang; Bhattacharya, Debashish
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errSave
Insights into coral bleaching under heat stress from analysis of gene expression in a sea anemone model system
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2020-11-09
err54
errOAAI
errCleves, Phillip A.; Krediet, Cory J.; Lehnert, Erik M.; Onishi, Masayuki; Pringle, John R.
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errSave
Reduced thermal tolerance in a coral carrying CRISPR-induced mutations in the gene for a heat-shock transcription factor
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2020-11-09
err62
errOAAI
errCleves, Phillip A.; Tinoco, Amanda I.; Bradford, Jacob; Perrin, Dimitri; Bay, Line K.; Pringle, John R.
errShare
errSave
Unknown to Known: Advancing Knowledge of Coral Gene Function
errTRENDS IN GENETICS
IF16.3
err2020-02-01
err33
errOAAI
errCleves, Phillip A.; Shumaker, Alexander; Lee, Junmo; Putnam, Hollie M.; Bhattacharya, Debashish
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errSave
An intronic enhancer of Bmp6 underlies evolved tooth gain in sticklebacks
errPLOS GENETICS
IF3.7
err2018-06-14
err28
errOAAI
errCleves, Phillip A.; Hart, James C.; Agoglia, Rachel M.; Jimenez, Monica T.; Erickson, Priscilla A.; Gai, Linda; Miller, Craig T.
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CRISPR/Cas9-mediated genome editing in a reef-building coral
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2018-04-25
err103
errOAAI
errClevesa, Phillip A.; Strader, Marie E.; Bay, Line K.; Pringle, John R.; Matz, Mikhail V.
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Genetic Dissection of a Supergene Implicates Tfap2a in Craniofacial Evolution of Threespine Sticklebacks
errGENETICS
IF5.1
err2018-03-28
err22
errOAAI
errErickson, Priscilla A.; Baek, Jiyeon; Hart, James C.; Cleves, Phillip A.; Miller, Craig T.
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errSave
Glucose-Induced Trophic Shift in an Endosymbiont Dinoflagellate with Physiological and Molecular Consequences
errPLANT PHYSIOLOGY
IF6.9
err2017-12-07
err32
errOAAI
errXiang, Tingting; Jinkerson, Robert E.; Clowez, Sophie; Tran, Cawa; Krediet, Cory J.; Onishi, Masayuki; Cleves, Phillip A.; Pringle, John R.; Grossman, Arthur R.
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errSave
Transcription factor NF-κB is modulated by symbiotic status in a sea anemone model of cnidarian bleaching
errSCIENTIFIC REPORTS
IF3.9
err2017-11-22
err64
errOAAI
errMansfield, Katelyn M.; Carter, Nicole M.; Nguyen, Linda; Cleves, Phillip A.; Alshanbayeva, Anar; Williams, Leah M.; Crowder, Camerron; Penvose, Ashley R.; Finnerty, John R.; Weis, Virginia M.; Siggers, Trevor W.; Gilmore, Thomas D.
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Research Directions

No research directions
Co-authors
Cooperation Journals
R
Roderic Guigó
H-index: 126 · Papers: 704
M
Mark Blaxter
H-index: 103 · Papers: 574
A
Arthur Grossman
H-index: 100 · Papers: 975
D
Dolph Schluter
H-index: 96 · Papers: 282
H
Heribert Hirt
H-index: 94 · Papers: 360
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