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Training pathologists to assess stromal tumour-infiltrating lymphocytes in breast cancer synergises efforts in clinical care and scientific research Ly, Amy; Garcia, Victor; Blenman, Kim R. M.; Ehinger, Anna; Elfer, Katherine; Hanna, Matthew G.; Li, Xiaoxian; Peeters, Dieter J. E.; Birmingham, Ryan; Dudgeon, Sarah; Gardecki, Emma; Gupta, Rajarsi; Lennerz, Jochen; Pan, Tony; Saltz, Joel; Wharton Jr, Keith A.; Ehinger, Daniel; Acs, Balazs; Dequeker, Elisabeth M. C.; Salgado, Roberto; Gallas, Brandon D. Share Save
Early risk stratification of ER+/HER2-breast cancer patients using digital pathology and multi-task, weakly-supervised deep learning Kaczmarzyk, Jakub R.; Torre-Healy, Luke A.; Moffitt, Richard A.; Gupta, Rajarsi; Hamilton, Alina M.; Kurc, Tahsin M.; Hoadley, Katherine A.; Troester, Melissa A.; Saltz, Joel H. Share Save
Image-based multiplex immune profiling of cancer tissues: translational implications. A report of the International Immuno-oncology Biomarker Working Group on Breast Cancer Jahangir, Chowdhury Arif; Page, David B.; Broeckx, Glenn; Gonzalez, Claudia A.; Burke, Caoimbhe; Murphy, Clodagh; Reis-Filho, Jorge S.; Ly, Amy; Harms, Paul W.; Gupta, Rajarsi R.; Vieth, Michael; Hida, Akira, I; Kahila, Mohamed; Kos, Zuzana; van Diest, Paul J.; Verbandt, Sara; Thagaard, Jeppe; Khiroya, Reena; Abduljabbar, Khalid; Haab, Gabriela Acosta; Acs, Balazs; Adams, Sylvia; Almeida, Jonas S.; Alvarado-Cabrero, Isabel; Azmoudeh-Ardalan, Farid; Badve, Sunil; Baharun, Nurkhairul Bariyah; Bellolio, Enrique R.; Bheemaraju, Vydehi; Blenman, Kim R. M.; Fujimoto, Luciana Botinelly Mendonca; Burgues, Octavio; Chardas, Alexandros; Cheang, Maggie Chon U.; Ciompi, Francesco; Cooper, Lee A. D.; Coosemans, An; Corredor, German; Portela, Flavio Luis Dantas; Deman, Frederik; Demaria, Sandra; Dudgeon, Sarah N.; Elghazawy, Mahmoud; Fernandez-Martin, Claudio; Fineberg, Susan; Fox, Stephen B.; Giltnane, Jennifer M.; Gnjatic, Sacha; Gonzalez-Ericsson, Paula, I; Grigoriadis, Anita; Halama, Niels; Hanna, Matthew G.; Harbhajanka, Aparna; Hart, Steven N.; Hartman, Johan; Hewitt, Stephen; Horlings, Hugo M.; Husain, Zaheed; Irshad, Sheeba; Janssen, Emiel A. M.; Kataoka, Tatsuki R.; Kawaguchi, Kosuke; Khramtsov, Andrey, I; Kiraz, Umay; Kirtani, Pawan; Kodach, Liudmila L.; Korski, Konstanty; Akturk, Guray; Scott, Ely; Kovacs, Aniko; Laenkholm, Anne-Vibeke; Lang-Schwarz, Corinna; Larsimont, Denis; Lennerz, Jochen K.; Lerousseau, Marvin; Li, Xiaoxian; Madabhushi, Anant; Maley, Sai K.; Narasimhamurthy, Vidya Manur; Marks, Douglas K.; McDonald, Elizabeth S.; Mehrotra, Ravi; Michiels, Stefan; Kharidehal, Durga; Minhas, Fayyaz ul Amir Afsar; Mittal, Shachi; Moore, David A.; Mushtaq, Shamim; Nighat, Hussain; Papathomas, Thomas; Penault-Llorca, Frederique; Perera, Rashindrie D.; Pinard, Christopher J.; Pinto-Cardenas, Juan Carlos; Pruneri, Giancarlo; Pusztai, Lajos; Rajpoot, Nasir Mahmood; Rapoport, Bernardo Leon; Rau, Tilman T.; Ribeiro, Joana M.; Rimm, David; Vincent-Salomon, Anne; Saltz, Joel; Sayed, Shahin; Hytopoulos, Evangelos; Mahon, Sarah; Siziopikou, Kalliopi P.; Sotiriou, Christos; Stenzinger, Albrecht; Sughayer, Maher A.; Sur, Daniel; Symmans, Fraser; Tanaka, Sunao; Taxter, Timothy; Tejpar, Sabine; Teuwen, Jonas; Thompson, E. Aubrey; Tramm, Trine; Tran, William T.; van Der Laak, Jeroen; Verghese, Gregory E.; Viale, Giuseppe; Wahab, Noorul; Walter, Thomas; Waumans, Yannick; Wen, Hannah Y.; Yang, Wentao; Yuan, Yinyin; Bartlett, John; Loibl, Sibylle; Denkert, Carsten; Savas, Peter; Loi, Sherene; Stovgaard, Elisabeth Specht; Salgado, Roberto; Gallagher, William M.; Rahman, Arman Share Save
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Initial interactions with the FDA on developing a validation dataset as a medical device development tool Hart, Steven; Garcia, Victor; Dudgeon, Sarah N.; Hanna, Matthew G.; Li, Xiaoxian; Blenman, Kim R. M.; Elfer, Katherine; Ly, Amy; Salgado, Roberto; Saltz, Joel; Gupta, Rajarsi; Hytopoulos, Evangelos; Larsimont, Denis; Lennerz, Jochen; Gallas, Brandon D. Share Save
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Pitfalls in machine learning-based assessment of tumor-infiltrating lymphocytes in breast cancer: a report of the international immuno-oncology biomarker working group Thagaard, Jeppe; Broeckx, Glenn; Page, David B.; Jahangir, Chowdhury Arif; Verbandt, Sara; Kos, Zuzana; Gupta, Rajarsi; Khiroya, Reena; Abduljabbar, Khalid; Acosta Haab, Gabriela; Acs, Balazs; Akturk, Guray; Almeida, Jonas S.; Alvarado-Cabrero, Isabel; Amgad, Mohamed; Azmoudeh-Ardalan, Farid; Badve, Sunil; Baharun, Nurkhairul Bariyah; Balslev, Eva; Bellolio, Enrique R.; Bheemaraju, Vydehi; Blenman, Kim R. M.; Botinelly Mendonca Fujimoto, Luciana; Bouchmaa, Najat; Burgues, Octavio; Chardas, Alexandros; Cheang, Maggie U.; Ciompi, Francesco; Cooper, Lee A. D.; Coosemans, An; Corredor, German; Dahl, Anders B.; Dantas Portela, Flavio Luis; Deman, Frederik; Demaria, Sandra; Dore Hansen, Johan; Dudgeon, Sarah N.; Ebstrup, Thomas; Elghazawy, Mahmoud; Fernandez-Martin, Claudio; Fox, Stephen B.; Gallagher, William M.; Giltnane, Jennifer M.; Gnjatic, Sacha; Gonzalez-Ericsson, Paula, I; Grigoriadis, Anita; Halama, Niels; Hanna, Matthew G.; Harbhajanka, Aparna; Hart, Steven N.; Hartman, Johan; Hauberg, Soren; Hewitt, Stephen; Hida, Akira, I; Horlings, Hugo M.; Husain, Zaheed; Hytopoulos, Evangelos; Irshad, Sheeba; Janssen, Emiel A. M.; Kahila, Mohamed; Kataoka, Tatsuki R.; Kawaguchi, Kosuke; Kharidehal, Durga; Khramtsov, Andrey, I; Kiraz, Umay; Kirtani, Pawan; Kodach, Liudmila L.; Korski, Konstanty; Kovacs, Aniko; Laenkholm, Anne-Vibeke; Lang-Schwarz, Corinna; Larsimont, Denis; Lennerz, Jochen K.; Lerousseau, Marvin; Li, Xiaoxian; Ly, Amy; Madabhushi, Anant; Maley, Sai K.; Manur Narasimhamurthy, Vidya; Marks, Douglas K.; McDonald, Elizabeth S.; Mehrotra, Ravi; Michiels, Stefan; Minhas, Fayyaz ul Amir Afsar; Mittal, Shachi; Moore, David A.; Mushtaq, Shamim; Nighat, Hussain; Papathomas, Thomas; Penault-Llorca, Frederique; Perera, Rashindrie D.; Pinard, Christopher J.; Pinto-Cardenas, Juan Carlos; Pruneri, Giancarlo; Pusztai, Lajos; Rahman, Arman; Rajpoot, Nasir Mahmood; Rapoport, Bernardo Leon; Rau, Tilman T.; Reis-Filho, Jorge S.; Ribeiro, Joana M.; Rimm, David; Roslind, Anne; Vincent-Salomon, Anne; Salto-Tellez, Manuel; Saltz, Joel; Sayed, Shahin; Scott, Ely; Siziopikou, Kalliopi P.; Sotiriou, Christos; Stenzinger, Albrecht; Sughayer, Maher A.; Sur, Daniel; Fineberg, Susan; Symmans, Fraser; Tanaka, Sunao; Taxter, Timothy; Tejpar, Sabine; Teuwen, Jonas; Thompson, E. Aubrey; Tramm, Trine; Tran, William T.; van Der Laak, Jeroen; van Diest, Paul J.; Verghese, Gregory E.; Viale, Giuseppe; Vieth, Michael; Wahab, Noorul; Walter, Thomas; Waumans, Yannick; Wen, Hannah Y.; Yang, Wentao; Yuan, Yinyin; Zin, Reena Md; Adams, Sylvia; Bartlett, John; Loibl, Sibylle; Denkert, Carsten; Savas, Peter; Loi, Sherene; Salgado, Roberto; Specht Stovgaard, Elisabeth Share Save
Deep Learning-Based Mapping of Tumor Infiltrating Lymphocytes in Whole Slide Images of 23 Types of Cancer Abousamra, Shahira; Gupta, Rajarsi; Hou, Le; Batiste, Rebecca; Zhao, Tianhao; Shankar, Anand; Rao, Arvind; Chen, Chao; Samaras, Dimitris; Kurc, Tahsin; Saltz, Joel Share Save
Automated digital TIL analysis (ADTA) adds prognostic value to standard assessment of depth and ulceration in primary melanoma Moore, Michael R.; Friesner, Isabel D.; Rizk, Emanuelle M.; Fullerton, Benjamin T.; Mondal, Manas; Trager, Megan H.; Mendelson, Karen; Chikeka, Ijeuru; Kurc, Tahsin; Gupta, Rajarsi; Rohr, Bethany R.; Robinson, Eric J.; Acs, Balazs; Chang, Rui; Kluger, Harriet; Taback, Bret; Geskin, Larisa J.; Horst, Basil; Gardner, Kevin; Niedt, George; Celebi, Julide T.; Gartrell-Corrado, Robyn D.; Messina, Jane; Ferringer, Tammie; Rimm, David L.; Saltz, Joel; Wang, Jing; Vanguri, Rami; Saenger, Yvonne M. Share Save
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Detecting Miscoded Diabetes Diagnosis Codes in Electronic Health Records for Quality Improvement: Temporal Deep Learning Approach Rashidian, Sina; Abell-Hart, Kayley; Hajagos, Janos; Moffitt, Richard; Lingam, Veena; Garcia, Victor; Tsai, Chao-Wei; Wang, Fusheng; Dong, Xinyu; Sun, Siao; Deng, Jianyuan; Gupta, Rajarsi; Miller, Joshua; Saltz, Joel; Saltz, Mary Share Save
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Segmentation and Classification in Digital Pathology for Glioma Research: Challenges and Deep Learning Approaches Kurc, Tahsin; Bakas, Spyridon; Ren, Xuhua; Bagari, Aditya; Momeni, Alexandre; Huang, Yue; Zhang, Lichi; Kumar, Ashish; Thibault, Marc; Qi, Qi; Wang, Qian; Kori, Avinash; Gevaert, Olivier; Zhang, Yunlong; Shen, Dinggang; Khened, Mahendra; Ding, Xinghao; Krishnamurthi, Ganapathy; Kalpathy-Cramer, Jayashree; Davis, James; Zhao, Tianhao; Gupta, Rajarsi; Saltz, Joel; Farahani, Keyvan Share Save
Preoperative pembrolizumab increases sTILs in treatment naive stage I/IIA TNBC patients in a window of opportunity trial Vanguri, Rami; Guo, Hua; Boboila, Shuobo; Kurc, Tahsin; Le, Han; Abousamra, Shahira; Hou, Le; Samaras, Dimitris; Gupta, Rajarsi; Saltz, Joel; Gardner, Kevin; Hibshoosh, Hanina; Kalinsky, Kevin; Connolly, Eileen Share Save
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