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M

Marius Pachitariu

hhmi

36H-index
91Paper Count
1.9WCitation Count
Published Papers 12
Publication Date
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A critical initialization for biological neural networks
errNature
IF48.5
err2026-05-20
err0
errOAAI
errMarius Pachitariu; Lin Zhong; Alexa Gracias; Amanda Minisi; Crystall Lopez; Carsen Stringer
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errSave
Large-scale high-density brain-wide neural recording in nonhuman primates
errNature Neuroscience
IF20
err2025-06-23
err0
errOAAI
errEric M. Trautmann; Janis K. Hesse; Gabriel M. Stine; Ruobing Xia; Shude Zhu; Daniel J. O’Shea; Bill Karsh; Jennifer Colonell; Frank F. Lanfranchi; Saurabh Vyas; Andrew Zimnik; Elom Amematsro; Natalie A. Steinemann; Daniel A. Wagenaar; Marius Pachitariu; Alexandru Andrei; Carolina Mora Lopez; John O’Callaghan; Jan Putzeys; Bogdan C. Raducanu; Marleen Welkenhuysen; Mark Churchland; Tirin Moore; Michael Shadlen; Krishna Shenoy; Doris Tsao; Barundeb Dutta; Timothy Harris
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errSave
Spike sorting with Kilosort4
errNATURE METHODS
IF32.1
err2024-04-08
err20
errOAAI
errPachitariu, Marius; Sridhar, Shashwat; Pennington, Jacob; Stringer, Carsen
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errSave
Cellpose 2.0: how to train your own model
errNATURE METHODS
IF32.1
err2022-11-07
err289
errOAAI
errPachitariu, Marius; Stringer, Carsen
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errSave
Electrode pooling can boost the yield of extracellular recordings with switchable silicon probes
errNATURE COMMUNICATIONS
IF15.7
err2021-09-02
err4
errOAAI
errLee, Kyu Hyun; Ni, Yu-Li; Colonell, Jennifer; Karsh, Bill; Putzeys, Jan; Pachitariu, Marius; Harris, Timothy D.; Meister, Markus
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errSave
Neuromatch Academy: Teaching Computational Neuroscience with Global Accessibility
errTRENDS IN COGNITIVE SCIENCES
IF17.2
err2021-07-01
err16
errOAAI
errvan Viegen, Tara; Akrami, Athena; Bonnen, Kathryn; DeWitt, Eric; Hyafil, Alexandre; Ledmyr, Helena; Lindsay, Grace W.; Mineault, Patrick; Murray, John D.; Pitkow, Xaq; Puce, Aina; Sedigh-Sarvestani, Madineh; Stringer, Carsen; Achakulvisut, Titipat; Alikarami, Elnaz; Atay, Melvin Selim; Batty, Eleanor; Erlich, Jeffrey C.; Galbraith, Byron V.; Guo, Yueqi; Juavinett, Ashley L.; Krause, Matthew R.; Li, Songting; Pachitariu, Marius; Straley, Elizabeth; Valeriani, Davide; Vaughan, Emma; Vaziri-Pashkam, Maryam; Waskom, Michael L.; Blohm, Gunna; Kording, Konra; Schrater, Paul; Wyble, Brad; Escola, Sean; Peters, Megan A. K.
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errSave
Survey of spiking in the mouse visual system reveals functional hierarchy
errNATURE
IF48.5
err2021-01-20
err258
errOAAI
errSiegle, Joshua H.; Jia, Xiaoxuan; Durand, Severine; Gale, Sam; Bennett, Corbett; Graddis, Nile; Heller, Greggory; Ramirez, Tamina K.; Choi, Hannah; Luviano, Jennifer A.; Groblewski, Peter A.; Ahmed, Ruweida; Arkhipov, Anton; Bernard, Amy; Billeh, Yazan N.; Brown, Dillan; Buice, Michael A.; Cain, Nicolas; Caldejon, Shiella; Casal, Linzy; Cho, Andrew; Chvilicek, Maggie; Cox, Timothy C.; Dai, Kael; Denman, Daniel J.; de Vries, Saskia E. J.; Dietzman, Roald; Esposito, Luke; Farrell, Colin; Feng, David; Galbraith, John; Garrett, Marina; Gelfand, Emily C.; Hancock, Nicole; Harris, Julie A.; Howard, Robert; Hu, Brian; Hytnen, Ross; Iyer, Ramakrishnan; Jessett, Erika; Johnson, Katelyn; Kato, India; Kiggins, Justin; Lambert, Sophie; Lecoq, Jerome; Ledochowitsch, Peter; Lee, Jung Hoon; Leon, Arielle; Li, Yang; Liang, Elizabeth; Long, Fuhui; Mace, Kyla; Melchior, Jose; Millman, Daniel; Mollenkopf, Tyler; Nayan, Chelsea; Ng, Lydia; Ngo, Kiet; Nguyen, Thuyahn; Nicovich, Philip R.; North, Kat; Ocker, Gabriel Koch; Ollerenshaw, Doug; Oliver, Michael; Pachitariu, Marius; Perkins, Jed; Reding, Melissa; Reid, David; Robertson, Miranda; Ronellenfitch, Kara; Seid, Sam; Slaughterbeck, Cliff; Stoecklin, Michelle; Sullivan, David; Sutton, Ben; Swapp, Jackie; Thompson, Carol; Turner, Kristen; Wakeman, Wayne; Whitesell, Jennifer D.; Williams, Derric; Williford, Ali; Young, Rob; Zeng, Hongkui; Naylor, Sarah; Phillips, John W.; Reid, R. Clay; Mihalas, Stefan; Olsen, Shawn R.; Koch, Christof
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errSave
Cellpose: a generalist algorithm for cellular segmentation
errNATURE METHODS
IF32.1
err2020-12-14
err1.4K
errOAAI
errStringer, Carsen; Wang, Tim; Michaelos, Michalis; Pachitariu, Marius
errShare
errSave
Arousal Modulates Retinal Output
errNEURON
IF15
err2020-08-01
err67
errOAAI
errSchroder, Sylvia; Steinmetz, Nicholas A.; Krumin, Michael; Pachitariu, Marius; Rizzi, Matteo; Lagnado, Leon; Harris, Kenneth D.; Carandini, Matteo
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errSave
Vision and Locomotion Shape the Interactions between Neuron Types in Mouse Visual Cortex
errNEURON
IF15
err2018-05-01
err165
errOAAI
errDipoppa, Mario; Ranson, Adam; Krumin, Michael; Pachitariu, Marius; Carandini, Matteo; Harris, Kenneth D.
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errSave
Inhibitory control of correlated intrinsic variability in cortical networks
errELIFE
IF0
err2016-12-07
err62
errOAAI
errStringer, Carsen; Pachitariu, Marius; Steinmetz, Nicholas A.; Okun, Michael; Bartho, Peter; Harris, Kenneth D.; Sahani, Maneesh; Lesica, Nicholas A.
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errSave
Learning Enhances Sensory and Multiple Non-sensory Representations in Primary Visual Cortex
errNEURON
IF15
err2015-06-01
err301
errOAAI
errPoort, Jasper; Khan, Adil G.; Pachitariu, Marius; Nemri, Abdellatif; Orsolic, Ivana; Krupic, Julija; Bauza, Marius; Sahani, Maneesh; Keller, Georg B.; Mrsic-Flogel, Thomas D.; Hofer, Sonja B.
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Research Directions

No research directions
Co-authors
Cooperation Journals
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Christof Koch
H-index: 160 · Papers: 1.1K
H
Hongkui Zeng
H-index: 94 · Papers: 377
K
Kenneth D. Harris
H-index: 90 · Papers: 673
K
Krishna V. Shenoy
H-index: 88 · Papers: 299
M
Matteo Carandini
H-index: 83 · Papers: 389
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