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Séamus Holden

Ecole Polytechnique Federale de Lausanne

24H-index
81Paper Count
3.9KCitation Count
Published Papers 32
Publication Date
The nucleoid of rapidly growing Escherichia coli localizes close to the inner membrane and is organized by transcription, translation, and cell geometry
err2025-04-20
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errOAAI
errSpahn, Christoph; Middlemiss, Stuart; Gomez-de-Mariscal, Estibaliz; Henriques, Ricardo; Bode, Helge B.; Holden, Seamus
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Complement-mediated killing of Escherichia coli by mechanical destabilization of the cell envelope
err2024-10-14
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PREAI
errBenn, Georgina; Bortolini, Christian; Roberts, David M.; Pyne, Alice L. B.; Holden, Seamus; Hoogenboom, Bart W.
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Self-organization of mortal filaments and its role in bacterial division ring formation
err2024-08-12
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errOAAI
errVanhille-Campos, Christian; Whitley, Kevin D.; Radler, Philipp; Loose, Martin; Holden, Seamus; Saric, Andela
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Molecular motor tug-of-war regulates elongasome cell wall synthesis dynamics in Bacillus subtilis
err2024-06-26
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errMiddlemiss, Stuart; Blandenet, Matthieu; Roberts, David M.; McMahon, Andrew; Grimshaw, James; Edwards, Joshua M.; Sun, Zikai; Whitley, Kevin D.; Blu, Thierry; Strahl, Henrik; Holden, Seamus
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Open microscopy in the life sciences: quo vadis?
err2022-08-25
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errHohlbein, Johannes; Diederich, Benedict; Marsikova, Barbora; Reynaud, Emmanuel G.; Holden, Seamus; Jahr, Wiebke; Haase, Robert; Prakash, Kirti
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DeepBacs for multi-task bacterial image analysis using open-source deep learning approaches
err2022-07-09
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errOAAI
errSpahn, Christoph; Gomez-de-Mariscal, Estibaliz; Laine, Romain F.; Pereira, Pedro M.; von Chamier, Lucas; Conduit, Mia; Pinho, Mariana G.; Jacquemet, Guillaume; Holden, Seamus; Heilemann, Mike; Henriques, Ricardo
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High-resolution imaging of bacterial spatial organization with vertical cell imaging by nanostructured immobilization (VerCINI)
err2022-01-31
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PREAI
errWhitley, Kevin D.; Middlemiss, Stuart; Jukes, Calum; Dekker, Cees; Holden, Seamus
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FtsZ treadmilling is essential for Z-ring condensation and septal constriction initiation in Bacillus subtilis cell division
err2021-04-27
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errOAAI
errWhitley, Kevin D.; Jukes, Calum; Tregidgo, Nicholas; Karinou, Eleni; Almada, Pedro; Cesbron, Yann; Henriques, Ricardo; Dekker, Cees; Holden, Seamus
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Democratising deep learning for microscopy with ZeroCostDL4Mic
err2021-04-15
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errvon Chamier, Lucas; Laine, Romain F.; Jukkala, Johanna; Spahn, Christoph; Krentzel, Daniel; Nehme, Elias; Lerche, Martina; Hernandez-Perez, Sara; Mattila, Pieta K.; Karinou, Eleni; Holden, Seamus; Solak, Ahmet Can; Krull, Alexander; Buchholz, Tim-Oliver; Jones, Martin L.; Royer, Loic A.; Leterrier, Christophe; Shechtman, Yoav; Jug, Florian; Heilemann, Mike; Jacquemet, Guillaume; Henriques, Ricardo
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Geometric principles underlying the proliferation of a model cell system
err2020-08-18
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errWu, Ling Juan; Lee, Seoungjun; Park, Sungshic; Eland, Lucy E.; Wipat, Anil; Holden, Seamus; Errington, Jeff
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Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software (vol 16, pg 387, 2019)
err2019-05-16
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errSage, Daniel; Thanh-An Pham; Babcock, Hazen; Lukes, Tomas; Pengo, Thomas; Chao, Jerry; Velmurugan, Ramraj; Herbert, Alex; Agrawal, Anurag; Colabrese, Silvia; Wheeler, Ann; Archetti, Anna; Rieger, Bernd; Ober, Raimund; Hagen, Guy M.; Sibarita, Jean-Baptiste; Ries, Jonas; Henriques, Ricardo; Unser, Michael; Holden, Seamus
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Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software
err2019-04-08
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errOAAI
errSage, Daniel; Thanh-An Pham; Babcock, Hazen; Lukes, Tomas; Pengo, Thomas; Chao, Jerry; Velmurugan, Ramraj; Herbert, Alex; Agrawal, Anurag; Colabrese, Silvia; Wheeler, Ann; Archetti, Anna; Rieger, Bernd; Ober, Raimund; Hagen, Guy M.; Sibarita, Jean-Baptiste; Ries, Jonas; Henriques, Ricardo; Unser, Michael; Holden, Seamus
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Movement dynamics of divisome proteins and PBP2x: FtsW in cells of Streptococcus pneumoniae
err2019-02-04
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errOAAI
errPerez, Amilcar J.; Cesbron, Yann; Shaw, Sidney L.; Villicana, Jesus Bazan; Tsui, Ho-Ching T.; Boersma, Michael J.; Ye, Ziyun A.; Tovpeko, Yanina; Dekker, Cees; Holden, Seamus; Winkler, Malcolm E.
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Modularity and determinants of a (bi-)polarization control system from free-living and obligate intracellular bacteria
err2016-12-23
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errBerge, Matthieu; Campagne, Sebastien; Mignolet, Johann; Holden, Seamus; Theraulaz, Laurence; Manley, Suliana; Allain, Frederic H-T; Viollier, Patrick H.
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Functional dichotomy and distinct nanoscale assemblies of acell cycle-c ontrolled bipolar zinc-finger regulator
err2016-12-23
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errMignolet, Johann; Holden, Seamus; Berge, Matthieu; Panis, Gael; Eroglu, Ezgi; Theraulaz, Laurence; Manley, Suliana; Viollier, Patrick H.
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IMAGING Super-resolution fight club
err2016-02-26
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errOAAI
errHolden, Seamus; Sage, Daniel
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FALCON: fast and unbiased reconstruction of high-density super-resolution microscopy data
err2014-04-03
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errMin, Junhong; Vonesch, Cedric; Kirshner, Hagai; Carlini, Lina; Olivier, Nicolas; Holden, Seamus; Manley, Suliana; Ye, Jong Chul; Unser, Michael
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High throughput 3D super-resolution microscopy reveals Caulobacter crescentus in vivo Z-ring organization
err2014-03-10
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errHolden, Seamus J.; Pengo, Thomas; Meibom, Karin L.; Fernandez, Carmen Fernandez; Collier, Justine; Manley, Suliana
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Super-Resolution Fluorescence Microscopy of Transcription Sites in E. coli
err2014-01-01
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errOAAI
errEndesfelder, Ulrike; Finan, Kieran; Holden, Seamus; Cook, Peter R.; Kapanidis, Achillefs N.; Heilemann, Mike
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