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S

Simone Sidoli

albert einstein college of medicine

57H-index
486Paper Count
1.1WCitation Count
Published Papers 178
Publication Date
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Single-molecule imaging reveals RNA polymerase II dynamics and TAF1-dependent promoter-proximal pause release
errNature Communications
IF15.7
err2026-06-20
err0
errOAAI
errNayem Haque; Ronald Cutler; Simone Sidoli; Robert A. Coleman
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ATF4 coordinates amino acid and nucleotide synthesis with selective protein translation to ensure proper DNA replication timing in leukemia cells
errNature Communications
IF15.7
err2026-06-20
err0
errOAAI
errJacklyn M. Huhn; Liana Valin; Mary Basse; Judith Sokei; Nishanth Gabriel; Esteban Martinez; Joice S. Kanefsky; Stephanie Stransky; Adrienne Dorrance; Ramiro Garzon; Daniela Di Marcantonio; Tomasz Skorski; Aaron R. Goldman; Hsin-Yao Tang; Samuele Cortellazzi; Orsola di Martino; John Krais; Simone Sidoli; Francesca Ferraro; David L. Wiest; Stephen M. Sykes
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errSave
Glucose-dependent spatial and temporal modulation of oligodendrocyte progenitor cell proliferation via ACLY-regulated histone acetylation
errNature Neuroscience
IF20
err2026-04-30
err0
PREAI
errSami Sauma; Stephanie Stransky; Ipek Selcen; Simone Sidoli; Rinat Abzalimov; Ye He; Patrizia Casaccia
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errSave
Adaptor-mediated recruitment of three dyneins to dynactin enhances force generation
errNature Cell Biology
IF19.1
err2026-02-16
err0
errOAAI
errLu Rao; Xinglei Liu; Mirjam Arnold; Kyoko Okada; Richard J. McKenney; Kristy Stengel; Simone Sidoli; Florian Berger; Arne Gennerich
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errSave
CoREST complex inhibition alters RNA splicing to promote neoantigen expression and enhance tumor immunity
errJCI Insight
IF6.1
err2026-01-23
err0
PREAI
errFisher, Robert J.; Park, Kihyun; Lee, Kwangwoon; Pinjusic, Katarina; Vanasse, Allison; Ennis, Christina S.; Farokh, Parisa; Ficaro, Scott B.; Marto, Jarrod A.; Jiang, Hanjie; Nam, Eunju; Stransky, Stephanie; Duke-Cohan, Joseph; Akinci, Melis A.; Geethadevi, Anupa; Raabe, Eric; Fiszbein, Ana; Demehri, Shadmehr; Sidoli, Simone; Hicks, Chad W.; Keskin, Derin B.; Wu, Catherine J.; Cole, Philip A.; Alani, Rhoda M.
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errSave
Mass spectrometry-based profiling of single-cell histone post-translational modifications to dissect chromatin heterogeneity
errNature Communications
IF15.7
err2025-12-12
err0
errOAAI
errRonald Cutler; Laura Corveleyn; Claudia Ctortecka; Francesca LiCausi; Joshua Cantlon; Alvaro Sebastian Vaca Jacome; Dieter Deforce; Jan Vijg; Maarten Dhaenens; Malvina Papanastasiou; Steven A. Carr; Simone Sidoli
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errSave
Chaperone-mediated autophagy regulates neuronal activity by sex-specific remodelling of the synaptic proteome
errNature Cell Biology
IF19.1
err2025-10-14
err0
PREAI
errRabia R. Khawaja; Ernesto Griego; Kristen Lindenau; Asma Salek; Jessica Gambardella; Aurora Scrivo; Hannah R. Monday; Mathieu Bourdenx; Jesús Madero-Pérez; Zohaib N. Khan; Bhakti Chavda; Ronald Cutler; Sarah Graff; Simone Sidoli; Gaetano Santulli; Laura Santambrogio; Inmaculada Tasset; Susmita Kaushik; Li Gan; Pablo E. Castillo; Ana Maria Cuervo
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errSave
Productive mRNA chromatin escape is promoted by PRMT5 activity
errMolecular Cell
IF16.6
err2025-10-13
err0
PREAI
errJoseph D. DeAngelo; Maxim I. Maron; Jacob S. Roth; Subray Hegde; Aliza M. Silverstein; Varun Gupta; Stephanie Stransky; Joel Basken; Joey Azofeifa; Charles C. Query; Simone Sidoli; Matthew J. Gamble; David Shechter
errShare
errSave
A needed nomenclature for nucleosomes
errMolecular Cell
IF16.6
err2025-10-02
err0
PREAI
errMichael-Christopher Keogh; Genevieve Almouzni; Andrew J. Andrews; Karim-Jean Armache; Cheryl H. Arrowsmith; Sung Hee Baek; Mark T. Bedford; Emily Bernstein; Jacques Côté; Yael David; John M. Denu; Beat Fierz; Benjamin A. Garcia; Karen C. Glass; Or Gozani; Kristian Helin; Steven Henikoff; Ole N. Jensen; Steven Z. Josefowicz; Neil L. Kelleher; Tatiana G. Kutateladze; Herbert H. Lindner; Chao Lu; Karolin Luger; Parag Mallick; Catherine A. Musselman; Tom W. Muir; Ljiljana Paša-Tolić; Robert Schneider; Xiaobing Shi; Yang Shi; Simone Sidoli; Lloyd M. Smith; Jessica K. Tyler; Cynthia Wolberger; Jerry L. Workman; Brian D. Strahl; Nicolas L. Young
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errSave
ACR-16/α7-nicotinic receptor signaling mediates nicotine-induced mitochondrial dysfunction and suppression of host defense against gram-negative bacteria
errEnvironmental Pollution
IF7.3
err2025-08-20
err0
PREAI
errPablo Scharf; Romina Deza-Ponzio; Stephanie Stransky; Simone Sidoli; Michael Aschner; Sandra Helena Poliselli Farsky
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errSave
Fabry disease cardiomyopathy: A state-of-the-art review
errProgress in Cardiovascular Diseases
IF7.6
err2025-08-19
err0
errOAAI
errShivangi Pande; Fahimeh Varzideh; Jessica Gambardella; Stanislovas S. Jankauskas; Federica Andrea Cerasuolo; Letizia Spinelli; Urna Kansakar; Antonio De Luca; Irwin J. Kurland; Simone Sidoli; Guido Iaccarino; Junichi Sadoshima; Gaetano Santulli
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errSave
Altered Metabolism in Heterozygous Mice With a Mutation in the Motor Domain of Cytoplasmic Dynein, DYNC1H1 (AAA4; c9052C>T(P3018S))
errPROTEOMICS
IF3.9
err2025-08-06
err0
PREAI
errSimone Sidoli; Mikhail Kislin; Ankita Poojari; Bridget Shafit-Zagardo
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errSave
Spatial hepatocyte plasticity of gluconeogenesis during the metabolic transitions between fed, fasted and starvation states
errNATURE METABOLISM
IF20.8
err2025-04-25
err1
errOAAI
errOkada, Junichi; Landgraf, Austin; Xiaoli, Alus M.; Liu, Li; Horton, Maxwell; Schuster, Victor L.; Yang, Fajun; Sidoli, Simone; Qiu, Yunping; Kurland, Irwin J.; Eliscovich, Carolina; Shinoda, Kosaku; Pessin, Jeffrey E.
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errSave
Analogue-Sensitive Inhibition of Histone Demethylases Uncovers Member-Specific Function in Ribosomal Protein Synthesis
errJOURNAL OF THE AMERICAN CHEMICAL SOCIETY
IF15.6
err2025-01-14
err0
errOAAI
errKuwik, Jordan; Scott, Valerie; Chedid, Sara; Stransky, Stephanie; Hinkelman, Kathryn; Kavoosi, Sam; Calderon, Michael; Watkins, Simon; Sidoli, Simone; Islam, Kabirul
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errSave
DNA hypomethylation promotes UHRF1-and SUV39H1/H2-dependent crosstalk between H3K18ub and H3K9me3 to reinforce heterochromatin states
errMOLECULAR CELL
IF16.6
err2025-01-01
err0
errOAAI
errLiu, Yanqing; Hrit, Joel A.; Chomiak, Alison A.; Stransky, Stephanie; Hoffman, Jordan R.; Tiedemann, Rochelle L.; Wiseman, Ashley K.; Kariapper, Leena S.; Dickson, Bradley M.; Worden, Evan J.; Fry, Christopher J.; Sidoli, Simone; Rothbart, Scott B.
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errSave
PX-12 modulates vorinostat-induced acetylation and methylation marks in CAL 27 cells
errEPIGENOMICS
IF2.6
err2024-12-23
err0
PREAI
errAkhlaq, Rafia; Ahmed, Tehmina; Khan, Tajwali; Jeelani, Syed Usama Yaseen; Joseph-Chowdhury, Jazmine-Saskya N.; Sidoli, Simone; Musharraf, Syed Ghulam; Ali, Arslan
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errSave
Two H3K23 histone methyltransferases, SET-32 and SET-21, function synergistically to promote nuclear RNAi-mediated transgenerational epigenetic inheritance in Caenorhabditis elegans
errGENETICS
IF5.1
err2024-12-11
err1
PREAI
errZhebrun, Anna; Ni, Julie Z.; Corveleyn, Laura; Roy, Siddharth Ghosh; Sidoli, Simone; Gu, Sam G.
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errSave
Unique structural configuration of EV-DNA primes Kupffer cell-mediated antitumor immunity to prevent metastatic progression
errNATURE CANCER
IF28.5
err2024-12-03
err1
PREAI
errWortzel, Inbal; Seo, Yura; Akano, Ife; Shaashua, Lee; Tobias, Gabriel Cardial; Hebert, Jakob; Kim, Kyung-A; Kim, Dooa; Dror, Shani; Liu, Yanshen; Azrak, Griffin Campbell; Cioffi, Michele; Johnson, Kofi Ennu; Hennika, Tammy; Twerski, Meshulam Zisha; Kushner, Alexis; Math, Robert; Han, Yoon Dae; Han, Dai Hoon; Jung, Minsun; Park, Juyeong; Paik, Soonmyung; Shin, Jeon-Soo; Lee, Min Goo; Russo, Marco Vincenzo; Zakheim, Daniel; Barnes, Jesse; Mehta, Sunjoy; Manova, Katia; Schwartz, Robert E.; Thakur, Basant Kumar; Boudreau, Nancy; Matei, Irina; Zhang, Haiying; Sidoli, Simone; Bromberg, Jacqueline; David, Yael; Kim, Han Sang; Lyden, David
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errSave
Alzheimer's disease-linked risk alleles elevate microglial cGAS-associated senescence and neurodegeneration in a tauopathy model
errNEURON
IF15
err2024-12-01
err0
errOAAI
errCarling, Gillian K.; Fan, Li; Foxe, Nessa R.; Norman, Kendra; Wong, Man Ying; Zhu, Daphne; Corona, Carlo; Razzoli, Agnese; Yu, Fangmin; Yarahmady, Allan; Ye, Pearly; Chen, Hao; Huang, Yige; Amin, Sadaf; Sereda, Rebecca; Lopez-Lee, Chloe; Zacharioudakis, Emmanouil; Chen, Xiaoying; Xu, Jielin; Cheng, Feixiong; Gavathiotis, Evripidis; Cuervo, Ana Maria; Holtzman, David M.; Mok, Sue-Ann; Sinha, Subhash C.; Sidoli, Simone; Ratan, Rajiv R.; Luo, Wenjie; Gong, Shiaoching; Gan, Li
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Parallel genome-scale CRISPR-Cas9 screens uncouple human pluripotent stem cell identity versus fitness
errNATURE COMMUNICATIONS
IF15.7
err2024-10-17
err0
errOAAI
errRosen, Bess P.; Li, Qing V.; Cho, Hyein S.; Liu, Dingyu; Yang, Dapeng; Graff, Sarah; Yan, Jielin; Luo, Renhe; Verma, Nipun; Damodaran, Jeyaram R.; Kale, Hanuman T.; Kaplan, Samuel J.; Beer, Michael A.; Sidoli, Simone; Huangfu, Danwei
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Research Directions

No research directions
Co-authors
Cooperation Journals
J
John Q. Trojanowski
H-index: 255 · Papers: 1.8K
D
David M. Holtzman
H-index: 204 · Papers: 1.0K
E
Eric J. Nestler
H-index: 187 · Papers: 1.6K
M
Manel Esteller
H-index: 165 · Papers: 1.6K
C
Chuan He
H-index: 161 · Papers: 978
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