Not logged in Transkingdom Network Analysis (TkNA): a systems framework for inferring causal factors underlying host-microbiota and other multi-omic interactions Newman, Nolan K.; Macovsky, Matthew S.; Rodrigues, Richard R.; Bruce, Amanda M.; Pederson, Jacob W.; Padiadpu, Jyothi; Shan, Jigui; Williams, Joshua; Patil, Sankalp S.; Dzutsev, Amiran K.; Shulzhenko, Natalia; Trinchieri, Giorgio; Brown, Kevin; Morgun, Andrey Share Save
Multi-omic network analysis identified betacellulin as a novel target of omega-3 fatty acid attenuation of western diet-induced nonalcoholic steatohepatitis Padiadpu, Jyothi; Garcia-Jaramillo, Manuel; Newman, Nolan K.; Pederson, Jacob W.; Rodrigues, Richard; Li, Zhipeng; Singh, Sehajvir; Monnier, Philip; Trinchieri, Giorgio; Brown, Kevin; Dzutsev, Amiran K.; Shulzhenko, Natalia; Jump, Donald B.; Morgun, Andrey Share Save
Reducing gut microbiome-driven adipose tissue inflammation alleviates metabolic syndrome Newman, N. K.; Zhang, Y.; Padiadpu, J.; Miranda, C. L.; Magana, A. A.; Wong, C. P.; Hioki, K. A.; Pederson, J. W.; Li, Z.; Gurung, M.; Bruce, A. M.; Brown, K.; Bobe, G.; Sharpton, T. J.; Shulzhenko, N.; Maier, C. S.; Stevens, J. F.; Gombart, A. F.; Morgun, A. Share Save
Early transcriptome changes associated with western diet induced NASH in Ldlr-/- mice points to activation of hepatic macrophages and an acute phase response Padiadpu, Jyothi; Spooner, Melinda H.; Li, Zhipeng; Newman, Nolan; Lohr, Christiane V.; Apperson, K. Denise; Dzutsev, Amiran; Trinchieri, Giorgio; Shulzhenko, Natalia; Morgun, Andrey; Jump, Donald B. Share Save
Microbiota and adipocyte mitochondrial damage in type 2 diabetes are linked by Mmp12+ macrophages Li, Zhipeng; Gurung, Manoj; Rodrigues, Richard R.; Padiadpu, Jyothi; Newman, Nolan K.; Manes, Nathan P.; Pederson, Jacob W.; Greer, Renee L.; Vasquez-Perez, Stephany; You, Hyekyoung; Hioki, Kaito A.; Moulton, Zoe; Fel, Anna; De Nardo, Dominic; Dzutsev, Amiran K.; Nita-Lazar, Aleksandra; Trinchieri, Giorgio; Shulzhenko, Natalia; Morgun, Andrey Share Save
Intestinal microbiota signatures of clinical response and immune-related adverse events in melanoma patients treated with anti-PD-1 McCulloch, John A.; Davar, Diwakar; Rodrigues, Richard R.; Badger, Jonathan H.; Fang, Jennifer R.; Cole, Alicia M.; Balaji, Ascharya K.; Vetizou, Marie; Prescott, Stephanie M.; Fernandes, Miriam R.; Costa, Raquel G. F.; Yuan, Wuxing; Salcedo, Rosalba; Bahadiroglu, Erol; Roy, Soumen; DeBlasio, Richelle N.; Morrison, Robert M.; Chauvin, Joe-Marc; Ding, Quanquan; Zidi, Bochra; Lowin, Ava; Chakka, Saranya; Gao, Wentao; Pagliano, Ornella; Ernst, Scarlett J.; Rose, Amy; Newman, Nolan K.; Morgun, Andrey; Zarour, Hassane M.; Trinchieri, Giorgio; Dzutsev, Amiran K. Share Save
Dietary Indole-3-Carbinol Activates AhR in the Gut, Alters Th17-Microbe Interactions, and Exacerbates Insulitis in NOD Mice Kahalehili, Heather M.; Newman, Nolan K.; Pennington, Jamie M.; Kolluri, Siva K.; Kerkvliet, Nancy, I; Shulzhenko, Natalia; Morgun, Andrey; Ehrlich, Allison K. Share Save
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