Motonori Ota - Publications, H-index & Citations

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Motonori Ota

Nagoya University

28H-index

217Paper Count

2.3KCitation Count

Published Papers 27

Publication Date

Longer internal exons tend to have more tandem repeats and more frequently experience insertions and deletions

LIFE SCIENCE ALLIANCE

IF2.9

2025-09-23

OAAI

Homma, Keiichi; Anbo, Hiroto; Ota, Motonori; Fukuchi, Satoshi

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Elastic network model reveals distinct flexibilities of capping proteins bound to CARMIL and twinfilin-tail

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2023-07-27

PREAI

Koike, Ryotaro; Ota, Motonori

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Structures and mechanisms of actin ATP hydrolysis

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2022-10-17

OAAI

Kanematsu, Yusuke; Narita, Akihiro; Oda, Toshiro; Koike, Ryotaro; Ota, Motonori; Takano, Yu; Moritsugu, Kei; Fujiwara, Ikuko; Tanaka, Kotaro; Komatsu, Hideyuki; Nagae, Takayuki; Watanabe, Nobuhisa; Iwasa, Mitsusada; Maeda, Yuichiro; Takeda, Shuichi

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Knowledge-based structural models of SARS-CoV-2 proteins and their complexes with potential drugs

FEBS LETTERS

IF3

2020-05-25

OAAI

Hijikata, Atsushi; Shionyu-Mitsuyama, Clara; Nakae, Setsu; Shionyu, Masafumi; Ota, Motonori; Kanaya, Shigehiko; Shirai, Tsuyoshi

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Description of Structural Changes by Motion Tree

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Koike, Ryotaro; Moritsugu, Kei; Ota, Motonori

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Structural changes of homodimers in the PDB

JOURNAL OF STRUCTURAL BIOLOGY

IF5.1

2018-04-01

PREAI

Koike, Ryotaro; Amemiya, Takayuki; Horii, Tatsuya; Ota, Motonori

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Large-scale aggregation analysis of eukaryotic proteins reveals an involvement of intrinsically disordered regions in protein folding

SCIENTIFIC REPORTS

IF3.9

2018-01-12

OAAI

Uemura, Eri; Niwa, Tatsuya; Minami, Shintaro; Takemoto, Kazuhiro; Fukuchi, Satoshi; Machida, Kodai; Imataka, Hiroaki; Ueda, Takuya; Ota, Motonori; Taguchi, Hideki

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Comprehensive analysis of motions in molecular dynamics trajectories of the actin capping protein and its inhibitor complexes

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2016-04-16

PREAI

Koike, Ryotaro; Takeda, Shuichi; Maeda, Yuichiro; Ota, Motonori

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Water Pathway Analysis of Multi-Drug Efflux Transporter AcrB

BIOPHYSICAL JOURNAL

IF3.1

2016-02-01

OAAI

Yamane, Tsutomu; Koike, Ryotaro; Ota, Motonori; Murakami, Satoshi; Kidera, Akinori; Ikeguchi, Mitsunori

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Investigation of the fatty acid transporter-encoding genes SLC27A3 and SLC27A4 in autism (vol 5, 16239, 2015)

SCIENTIFIC REPORTS

IF3.9

2016-01-29

OAAI

Maekawa, Motoko; Iwayama, Yoshimi; Ohnishi, Tetsuo; Toyoshima, Manabu; Shimamoto, Chie; Hisano, Yasuko; Toyota, Tomoko; Balan, Shabeesh; Matsuzaki, Hideo; Iwata, Yasuhide; Takagai, Shu; Yamada, Kohei; Ota, Motonori; Fukuchi, Satoshi; Okada, Yohei; Akamatsu, Wado; Tsujii, Masatsugu; Kojima, Nobuhiko; Owada, Yuji; Okano, Hideyuki; Mori, Norio; Yoshikawa, Takeo

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Investigation of the fatty acid transporter-encoding genes SLC27A3 and SLC27A4 in autism

SCIENTIFIC REPORTS

IF3.9

2015-11-09

OAAI

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Hierarchical domain-motion analysis of conformational changes in sarcoplasmic reticulum Ca2+-ATPase

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2015-02-10

PREAI

Kobayashi, Chigusa; Koike, Ryotaro; Ota, Motonori; Sugita, Yuji

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Exon resequencing of H3K9 methyltransferase complex genes, EHMT1, EHTM2 and WIZ, in Japanese autism subjects

MOLECULAR AUTISM

IF5.5

2014-10-06

OAAI

Balan, Shabeesh; Iwayama, Yoshimi; Maekawa, Motoko; Toyota, Tomoko; Ohnishi, Tetsuo; Toyoshima, Manabu; Shimamoto, Chie; Esaki, Kayoko; Yamada, Kazuo; Iwata, Yasuhide; Suzuki, Katsuaki; Ide, Masayuki; Ota, Motonori; Fukuchi, Satoshi; Tsujii, Masatsugu; Mori, Norio; Shinkai, Yoichi; Yoshikawa, Takeo

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IDEAL in 2014 illustrates interaction networks composed of intrinsically disordered proteins and their binding partners

NUCLEIC ACIDS RESEARCH

IF13.1

2013-10-30

OAAI

Fukuchi, Satoshi; Amemiya, Takayuki; Sakamoto, Shigetaka; Nobe, Yukiko; Hosoda, Kazuo; Kado, Yumiko; Murakami, Seiko D.; Koike, Ryotaro; Hiroaki, Hidekazu; Ota, Motonori

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Accidental Interaction between PDZ Domains and Diclofenac Revealed by NMR-Assisted Virtual Screening

MOLECULES

IF4.6

2013-08-09

OAAI

Tenno, Takeshi; Goda, Natsuko; Umetsu, Yoshitaka; Ota, Motonori; Kinoshita, Kengo; Hiroaki, Hidekazu

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Substrate-shielding and hydrolytic reaction in hydrolases

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2013-02-25

PREAI

Kanematsu, Yusuke; Koike, Ryotaro; Amemiya, Takayuki; Ota, Motonori

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Different Scale Conformational Changes of SERCA Analyzed with Motion Tree Method

BIOPHYSICAL JOURNAL

IF3.1

2013-01-01

OAAI

Kobayashi, Chigusa; Koike, Ryotaro; Ota, Motonori; Sugita, Yuji

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An assignment of intrinsically disordered regions of proteins based on NMR structures

JOURNAL OF STRUCTURAL BIOLOGY

IF5.1

2013-01-01

OAAI

Ota, Motonori; Koike, Ryotaro; Amemiya, Takayuki; Tenno, Takeshi; Romero, Pedro R.; Hiroaki, Hidekazu; Dunker, A. Keith; Fukuchi, Satoshi

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PSCDB: a database for protein structural change upon ligand binding

NUCLEIC ACIDS RESEARCH

IF13.1

2011-11-10

OAAI

Amemiya, Takayuki; Koike, Ryotaro; Kidera, Akinori; Ota, Motonori

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IDEAL: Intrinsically Disordered proteins with Extensive Annotations and Literature

NUCLEIC ACIDS RESEARCH

IF13.1

2011-11-08

OAAI

Fukuchi, Satoshi; Sakamoto, Shigetaka; Nobe, Yukiko; Murakami, Seiko D.; Amemiya, Takayuki; Hosoda, Kazuo; Koike, Ryotaro; Hiroaki, Hidekazu; Ota, Motonori

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Research Directions