arrow
Back
F

Fergus Shanahan

university college cork

135H-index
1.1KPaper Count
7.2WCitation Count
Published Papers 319
Publication Date
Gut microbiome features associated with Bifidobacterium colonization predict personalized probiotic persistence patterns
err2026-04-23
err0
errOAAI
errSourav Goswami; Alisha Ansari; Chetan Saraf; Paul W. O’Toole; Fergus Shanahan; Vineet Ahuja; Tarini Shankar Ghosh
errShare
errSave
Exploring the concept of bacterial memory
err2025-11-14
err0
PREAI
errKillian Scanlon; Fergus Shanahan; R. Paul Ross; Colin Hill
errShare
errSave
Temporal stability and lack of variance in microbiome composition and functionality in fit recreational athletes
err2025-02-15
err0
errOAAI
errO' Donovan, Ciara M.; Nori, Sai Ravi Chandra; Shanahan, Fergus; Celentano, Gerardina; Murphy, Thomas Brendan; Cotter, Paul D.; O'Sullivan, Orla
errShare
errSave
Probiotics in Health Care: A Critical Appraisal
err2025-01-27
err1
PREAI
errQuigley, Eamonn M. M.; Shanahan, Fergus
errShare
errSave
Host-microbe multi-omics and succinotype profiling have prognostic value for future relapse in patients with inflammatory bowel disease
err2025-01-15
err0
errOAAI
errJill O’Sullivan; Shriram Patel; Gabriel E. Leventhal; Rachel S. Fitzgerald; Emilio J. Laserna-Mendieta; Chloe E. Huseyin; Nina Konstantinidou; Erica Rutherford; Aonghus Lavelle; Karim Dabbagh; Todd Z. DeSantis; Fergus Shanahan; Andriy Temko; Shoko Iwai; Marcus J. Claesson
errShare
errSave
Cross-Cohort Gut Microbiome Signatures of Irritable Bowel Syndrome Presentation and Treatment
err2024-09-07
err1
errOAAI
errLi, Junhui; Ghosh, Tarini Shankar; Arendt, Elke; Shanahan, Fergus; O'Toole, Paul W.
errShare
errSave
Comparative diet-gut microbiome analysis in Crohn's disease and Hidradenitis suppurativa
err2023-11-10
err5
errOAAI
errCronin, Peter; Mccarthy, Siobhan; Hurley, Cian; Ghosh, Tarini Shankar; Cooney, Jakki C.; Tobin, Ann-Marie; Murphy, Michelle; O'Connor, Eibhlis M.; Shanahan, Fergus; O'Toole, Paul W.
errShare
errSave
Translating the Microbiome: What's the Target?
err2023-08-01
err3
errOAAI
errOtoole, Paul W.; Ghosh, Tarini Shankar; Goswami, Sourav; Manghi, Paolo; Segata, Nicola; Shanahan, Fergus
errShare
errSave
Ability of Bifidobacterium breve 702258 to transfer from mother to infant: the MicrobeMom randomized controlled trial
err2023-07-01
err11
errOAAI
errMoore, Rebecca L.; Feehily, Conor; Killeen, Sarah Louise; Yelverton, Cara A.; Geraghty, Aisling A.; Walsh, Calum J.; O'Neill, Ian J.; Nielsan, Ida Busch; Lawton, Elaine M.; Sanchez-Gallardo, Rocio; Nori, Sai Ravi Chandra; Shanahan, Fergus; Murphy, Eileen F.; Van Sinderen, Douwe; Cotter, Paul D.; McAuliffe, Fionnuala M.
errShare
errSave
Human microbiome variance is underestimated
err2023-06-01
err14
errOAAI
errShanahan, Fergus; Ghosh, Tarini S.; O'Toole, Paul W.
errShare
errSave
Detailed mapping of Bifidobacterium strain transmission from mother to infant via a dual culture-based and metagenomic approach
err2023-05-25
err21
errOAAI
errFeehily, Conor; O'Neill, Ian J.; Walsh, Calum J.; Moore, Rebecca L.; Killeen, Sarah Louise; Geraghty, Aisling A.; Lawton, Elaine M.; Byrne, David; Sanchez-Gallardo, Rocio; Nori, Sai Ravi Chandra; Nielsen, Ida Busch; Wortmann, Esther; Matthews, Elizabeth; O'Flaherty, Roisin; Rudd, Pauline M.; Groeger, David; Shanahan, Fergus; Saldova, Radka; McAuliffe, Fionnuala M.; Van Sinderen, Douwe; Cotter, Paul D.
errShare
errSave
errShare
errSave
Cyclin E associates with components of the pre-mRNA splicing machinery in mammalian cells
err2023-03-27
err99
errOAAI
errSeghezzi, W; Chua, K; Shanahan, F; Gozani, O; Reed, R; Lees, E
errShare
errSave
Interpersonal variability of the human gut virome confounds disease signal detection in IBD
err2023-02-25
err7
errOAAI
errStockdale, Stephen R.; Shkoporov, Andrey N.; Khokhlova, Ekaterina V.; Daly, Karen M.; McDonnell, Siobhan A.; O' Regan, Orla; Nolan, James A.; Sutton, Thomas D. S.; Clooney, Adam G.; Ryan, Feargal J.; Sheehan, Donal; Lavelle, Aonghus; Draper, Lorraine A.; Shanahan, Fergus; Ross, R. Paul; Hill, Colin
errShare
errSave
An IBD-associated pathobiont synergises with NSAID to promote colitis which is blocked by NLRP3 inflammasome and Caspase-8 inhibitors
err2023-01-19
err10
errOAAI
errSingh, Raminder; Rossini, Valerio; Stockdale, Stephen R.; Saiz-Gonzalo, Gonzalo; Hanrahan, Naomi; D' Souza, Tanya; Clooney, Adam; Draper, Lorraine A.; Hill, Colin; Nally, Ken; Shanahan, Fergus; Andersson-Engels, Stefan; Melgar, Silvia
errShare
errSave
The nonindustrialised microbiome in a modern world
err2022-11-23
err7
PREAI
errShanahan, Fergus; Ghosh, Tarini S.; Molloy, Michael G.; O'Toole, Paul W.
errShare
errSave
Toward an improved definition of a healthy microbiome for healthy aging
err2022-11-17
err52
errOAAI
errGhosh, Tarini Shankar; Shanahan, Fergus; O'Toole, Paul W.
errShare
errSave
DNA sensor-associated type I interferon signaling is increased in ulcerative colitis and induces JAK-dependent inflammatory cell death in colonic organoids
err2022-11-01
err23
errOAAI
errFlood, Peter; Fanning, Aine; Woznicki, Jerzy A.; Crowley, Tadhg; Christopher, Andrea; Vaccaro, Alessandra; Houston, Aileen; McSweeney, Sheila; Ross, Sarah; Hogan, Aileen; Brint, Elizabeth; Skowyra, Agnieszka; Bustamante, Milan; Ambrose, Monica; Moloney, Gerard; MacSharry, John; Hammarstrom, Marie-Louise; Hurley, Margot; Fitzgibbons, Christine; Quigley, Eamonn M. M.; Shanahan, Fergus; Zulquernain, Syed A.; McCarthy, Jane; Dodson, G. Steven; Dabbagh, Karim; McRae, Bradford L.; Melgar, Silvia; Nally, Ken
errShare
errSave
Interactions between Medications and the Gut Microbiome in Inflammatory Bowel Disease
err2022-10-04
err5
errOAAI
errEckenberger, Julia; Butler, James C.; Bernstein, Charles N.; Shanahan, Fergus; Claesson, Marcus J.
errShare
errSave
Modulation, microbiota and inflammation in the adult CF gut: A prospective study
err2022-09-01
err11
errOAAI
errRonan, N. J.; Einarsson, G. G.; Deane, J.; Fouhy, F.; Rea, M.; Hill, C.; Shanahan, F.; Elborn, J. S.; Ross, R. P.; McCarthy, M.; Murphy, D. M.; Eustace, J. A.; Tunney, M. M.; Stanton, C.; Plant, B. J.
errShare
errSave