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Blm10-Based Compounds Add to the Knowledge of How Allosteric Modulators Influence Human 20S Proteasome Witkowska, Julia; Gizynska, Malgorzata; Karpowicz, Przemyslaw; Sowik, Daria; Trepczyk, Karolina; Hennenberg, Fabian; Chari, Ashwin; Gieldon, Artur; Pierzynowska, Karolina; Gaffke, Lidia; Wegrzyn, Grzegorz; Jankowska, Elzbieta Share Save
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Structural dynamics of the TPR domain of the peroxisomal cargo receptor Pex5 in Trypanosoma Banasik, Michal; Napolitano, Valeria; Blat, Artur; Abdulkarim, Karim; Plewka, Jacek; Czaplewski, Cezary; Gieldon, Artur; Kozak, Maciej; Wladyka, Benedykt; Popowicz, Grzegorz; Dubin, Grzegorz Share Save
Assessment of Four Theoretical Approaches to Predict Protein Flexibility in the Crystal Phase and Solution Dziadek, L. J.; Sieradzan, A. K.; Czaplewski, C.; Zalewski, M.; Banas, F.; Toczek, M.; Nisterenko, W.; Grudinin, S.; Liwo, A.; Gieldon, A. Share Save
Exploring the inhibitory potential of in silico-designed small peptides on Helicobacter pylori Hp0231 (DsbK), a periplasmic oxidoreductase involved in disulfide bond formation Roszczenko-Jasinska, Paula; Gieldon, Artur; Mazur, Dominika; Spodzieja, Marta; Plichta, Maciej; Czaplewski, Cezary; Bal, Wojciech; Jagusztyn-Krynicka, Elzbieta K.; Bartosik, Dariusz Share Save
Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment Lensink, Marc F.; Brysbaert, Guillaume; Raouraoua, Nessim; Bates, Paul A.; Giulini, Marco; Honorato, Rodrigo V.; van Noort, Charlotte; Teixeira, Joao M. C.; Bonvin, Alexandre M. J. J.; Kong, Ren; Shi, Hang; Lu, Xufeng; Chang, Shan; Liu, Jian; Guo, Zhiye; Chen, Xiao; Morehead, Alex; Roy, Raj S.; Wu, Tianqi; Giri, Nabin; Quadir, Farhan; Chen, Chen; Cheng, Jianlin; Del Carpio, Carlos A.; Ichiishi, Eichiro; Rodriguez-Lumbreras, Luis A.; Fernandez-Recio, Juan; Harmalkar, Ameya; Chu, Lee-Shin; Canner, Sam; Smanta, Rituparna; Gray, Jeffrey J.; Li, Hao; Lin, Peicong; He, Jiahua; Tao, Huanyu; Huang, Sheng-You; Roel-Touris, Jorge; Jimenez-Garcia, Brian; Christoffer, Charles W.; Jain, Anika J.; Kagaya, Yuki; Kannan, Harini; Nakamura, Tsukasa; Terashi, Genki; Verburgt, Jacob C.; Zhang, Yuanyuan; Zhang, Zicong; Fujuta, Hayato; Sekijima, Masakazu; Kihara, Daisuke; Khan, Omeir; Kotelnikov, Sergei; Ghani, Usman; Padhorny, Dzmitry; Beglov, Dmitri; Vajda, Sandor; Kozakov, Dima; Negi, Surendra S.; Ricciardelli, Tiziana; Barradas-Bautista, Didier; Cao, Zhen; Chawla, Mohit; Cavallo, Luigi; Oliva, Romina; Yin, Rui; Cheung, Melyssa; Guest, Johnathan D.; Lee, Jessica; Pierce, Brian G.; Shor, Ben; Cohen, Tomer; Halfon, Matan; Schneidman-Duhovny, Dina; Zhu, Shaowen; Yin, Rujie; Sun, Yuanfei; Shen, Yang; Maszota-Zieleniak, Martyna; Bojarski, Krzysztof K.; Lubecka, Emilia A.; Marcisz, Mateusz; Danielsson, Annemarie; Dziadek, Lukasz; Gaardlos, Margrethe; Gieldon, Artur; Liwo, Adam; Samsonov, Sergey A.; Slusarz, Rafal; Zieba, Karolina; Sieradzan, Adam K.; Czaplewski, Cezary; Kobayashi, Shinpei; Miyakawa, Yuta; Kiyota, Yasuomi; Takeda-Shitaka, Mayuko; Olechnovic, Kliment; Valancauskas, Lukas; Dapkunas, Justas; Venclovas, Ceslovas; Wallner, Bjorn; Yang, Lin; Hou, Chengyu; He, Xiaodong; Guo, Shuai; Jiang, Shenda; Ma, Xiaoliang; Duan, Rui; Qui, Liming; Xu, Xianjin; Zou, Xiaoqin; Velankar, Sameer; Wodak, Shoshana J. Share Save
A Novel Cryptic Clostridial Peptide That Kills Bacteria by a Cell Membrane Permeabilization Mechanism Szadkowska, Monika; Olewniczak, Michal; Kloska, Anna; Jankowska, Elzbieta; Kapusta, Malgorzata; Rybak, Bartosz; Wyrzykowski, Dariusz; Zmudzinska, Wioletta; Gieldon, Artur; Kocot, Aleksandra; Kaczorowska, Anna-Karina; Nierzwicki, Lukasz; Makowska, Joanna; Kaczorowski, Tadeusz; Plotka, Magdalena Share Save
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Cathepsin C inhibition as a potential treatment strategy in cancer Korkmaz, Brice; Lamort, Anne-Sophie; Domain, Roxane; Beauvillain, Celine; Gieldon, Artur; Yildirim, Ali Oender; Stathopoulos, Georgios T.; Rhimi, Moez; Jenne, Dieter E.; Kettritz, Ralph Share Save
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Prediction of protein assemblies, the next frontier: The CASP14-CAPRI experiment Lensink, Marc F.; Brysbaert, Guillaume; Mauri, Theo; Nadzirin, Nurul; Velankar, Sameer; Chaleil, Raphael A. G.; Clarence, Tereza; Bates, Paul A.; Kong, Ren; Liu, Bin; Yang, Guangbo; Liu, Ming; Shi, Hang; Lu, Xufeng; Chang, Shan; Roy, Raj S.; Quadir, Farhan; Liu, Jian; Cheng, Jianlin; Antoniak, Anna; Czaplewski, Cezary; Gieldon, Artur; Kogut, Mateusz; Lipska, Agnieszka G.; Liwo, Adam; Lubecka, Emilia A.; Maszota-Zieleniak, Martyna; Sieradzan, Adam K.; Slusarz, Rafal; Wesolowski, Patryk A.; Zieba, Karolina; Del Carpio Munoz, Carlos A.; Ichiishi, Eiichiro; Harmalkar, Ameya; Gray, Jeffrey J.; Bonvin, Alexandre M. J. J.; Ambrosetti, Francesco; Vargas Honorato, Rodrigo; Jandova, Zuzana; Jimenez-Garcia, Brian; Koukos, Panagiotis I.; Van Keulen, Siri; Van Noort, Charlotte W.; Reau, Manon; Roel-Touris, Jorge; Kotelnikov, Sergei; Padhorny, Dzmitry; Porter, Kathryn A.; Alekseenko, Andrey; Ignatov, Mikhail; Desta, Israel; Ashizawa, Ryota; Sun, Zhuyezi; Ghani, Usman; Hashemi, Nasser; Vajda, Sandor; Kozakov, Dima; Rosell, Mireia; Rodriguez-Lumbreras, Luis A.; Fernandez-Recio, Juan; Karczynska, Agnieszka; Grudinin, Sergei; Yan, Yumeng; Li, Hao; Lin, Peicong; Huang, Sheng-You; Christoffer, Charles; Terashi, Genki; Verburgt, Jacob; Sarkar, Daipayan; Aderinwale, Tunde; Wang, Xiao; Kihara, Daisuke; Nakamura, Tsukasa; Hanazono, Yuya; Gowthaman, Ragul; Guest, Johnathan D.; Yin, Rui; Taherzadeh, Ghazaleh; Pierce, Brian G.; Barradas-Bautista, Didier; Cao, Zhen; Cavallo, Luigi; Oliva, Romina; Sun, Yuanfei; Zhu, Shaowen; Shen, Yang; Park, Taeyong; Woo, Hyeonuk; Yang, Jinsol; Kwon, Sohee; Won, Jonghun; Seok, Chaok; Kiyota, Yasuomi; Kobayashi, Shinpei; Harada, Yoshiki; Takeda-Shitaka, Mayuko; Kundrotas, Petras J.; Singh, Amar; Vakser, Ilya A.; Dapkunas, Justas; Olechnovic, Kliment; Venclovas, Ceslovas; Duan, Rui; Qiu, Liming; Xu, Xianjin; Zhang, Shuang; Zou, Xiaoqin; Wodak, Shoshana J. Share Save
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13 Karczynska, Agnieszka S.; Zieba, Karolina; Uciechowska, Urszula; Mozolewska, Magdalena A.; Krupa, Pawel; Lubecka, Emilia A.; Lipska, Agnieszka G.; Sikorska, Celina; Samsonov, Sergey A.; Sieradzan, Adam K.; Gieldon, Artur; Liwo, Adam; Slusarz, Rafal; Slusarz, Magdalena; Lee, Jooyoung; Joo, Keehyoung; Czaplewski, Cezary Share Save
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Structure-based design and in vivo anti-arthritic activity evaluation of a potent dipeptidyl cyclopropyl nitrile inhibitor of cathepsin C Korkmaz, Brice; Lesner, Adam; Wysocka, Magdalena; Gieldon, Artur; Hakansson, Maria; Gauthier, Francis; Logan, Derek T.; Jenne, Dieter E.; Lauritzen, Conni; Pedersen, John Share Save
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An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12 Keasar, Chen; McGuffin, Liam J.; Wallner, Bjorn; Chopra, Gaurav; Adhikari, Badri; Bhattacharya, Debswapna; Blake, Lauren; Bortot, Leandro Oliveira; Cao, Renzhi; Dhanasekaran, B. K.; Dimas, Itzhel; Faccioli, Rodrigo Antonio; Faraggi, Eshel; Ganzynkowicz, Robert; Ghosh, Sambit; Ghosh, Soma; Gieldon, Artur; Golon, Lukasz; He, Yi; Heo, Lim; Hou, Jie; Khan, Main; Khatib, Firas; Khoury, George A.; Kieslich, Chris; Kim, David E.; Krupa, Pawel; Lee, Gyu Rie; Li, Hongbo; Li, Jilong; Lipska, Agnieszka; Liwo, Adam; Maghrabi, Ali Hassan A.; Mirdita, Milot; Mirzaei, Shokoufeh; Mozolewska, Magdalena A.; Onel, Melis; Ovchinnikov, Sergey; Shah, Anand; Shah, Utkarsh; Sidi, Tomer; Sieradzan, Adam K.; Slusarz, Magdalena; Slusarz, Rafal; Smadbeck, James; Tamamis, Phanourios; Trieber, Nicholas; Wirecki, Tomasz; Yin, Yanping; Zhang, Yang; Bacardit, Jaume; Baranowski, Maciej; Chapman, Nicholas; Cooper, Seth; Defelicibus, Alexandre; Flatten, Jeff; Koepnick, Brian; Popovic, Zoran; Zaborowski, Bartlomiej; Baker, David; Cheng, Jianlin; Czaplewski, Cezary; Botazzo Delbem, Alexandre Claudio; Floudas, Christodoulos; Kloczkowski, Andrzej; Oldziej, Stanislaw; Levitt, Michael; Scheraga, Harold; Seok, Chaok; Soeding, Johannes; Vishveshwara, Saraswathi; Xu, Dong; Crivelli, Silvia N. Share Save
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Biochemical properties of the HtrA homolog from bacterium Stenotrophomonas maltophilia Zarzecka, Urszula; Modrak-Wojcik, Anna; Bayassi, Martyna; Szewczyk, Maciej; Gieldon, Artur; Lesner, Adam; Koper, Tomasz; Bzowska, Agnieszka; Sanguinetti, Maurizio; Backert, Steffen; Lipinska, Barbara; Skorko-Glonek, Joanna Share Save
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