Not logged in Automating the segmentation, date extraction, and classification of multi-report PDFs in outside medical records using optical character recognition and generative artificial intelligence Damani, Shivam; Hinton, Benjamin; Hunt, Tanner; Lawrence, Nicholas; Miller, Kurt; Rice, Melinda; Peterson, Kevin; McLaughlin, Sarah; Ryu, Alexander Share Save
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Substantial Hierarchical Reductions of Genetic and Morphological Traits in the Evolution of Rotiferan Parasites Herlyn, Holger; Hembrom, Anju Angelina; Tosar, Juan-Pablo; Mauer, Katharina M.; Schmidt, Hanno; Dezfuli, Bahram Sayyaf; Hankeln, Thomas; Bachmann, Lutz; Sarkies, Peter; Peterson, Kevin J.; Fromm, Bastian Share Save
MirGeneDB 3.0: improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families and updated covariance models Clarke, Alexander W.; Hoye, Eirik; Hembrom, Anju Angelina; Paynter, Vanessa Molin; Vinther, Jakob; Wyrozemski, Lukasz; Biryukova, Inna; Formaggioni, Alessandro; Ovchinnikov, Vladimir; Herlyn, Holger; Pierce, Alexandra; Wu, Charles; Aslanzadeh, Morteza; Cheneby, Jeanne; Martinez, Pedro; Friedlander, Marc R.; Hovig, Eivind; Hackenberg, Michael; Umu, Sinan Ugur; Johansen, Morten; Peterson, Kevin J.; Fromm, Bastian Share Save
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences Yu, Daqi; Ren, Yandong; Uesaka, Masahiro; Beavan, Alan J. S.; Muffato, Matthieu; Shen, Jieyu; Li, Yongxin; Sato, Iori; Wan, Wenting; Clark, James W.; Keating, Joseph N.; Carlisle, Emily M.; Dearden, Richard P.; Giles, Sam; Randle, Emma; Sansom, Robert S.; Feuda, Roberto; Fleming, James F.; Sugahara, Fumiaki; Cummins, Carla; Patricio, Mateus; Akanni, Wasiu; D'Aniello, Salvatore; Bertolucci, Cristiano; Irie, Naoki; Alev, Cantas; Sheng, Guojun; de Mendoza, Alex; Maeso, Ignacio; Irimia, Manuel; Fromm, Bastian; Peterson, Kevin J.; Das, Sabyasachi; Hirano, Masayuki; Rast, Jonathan P.; Cooper, Max D.; Paps, Jordi; Pisani, Davide; Kuratani, Shigeru; Martin, Fergal J.; Wang, Wen; Donoghue, Philip C. J.; Zhang, Yong E.; Pascual-Anaya, Juan Share Save
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MicroRNAs are deeply linked to the emergence of the complex octopus brain Zolotarov, Grygoriy; Fromm, Bastian; Legnini, Ivano; Ayoub, Salah; Polese, Gianluca; Maselli, Valeria; Chabot, Peter J.; Vinther, Jakob; Styfhals, Ruth; Seuntjens, Eve; Di Cosmo, Anna; Peterson, Kevin J.; Rajewsky, Nikolaus Share Save
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MirGeneDB 2.1: toward a complete sampling of all major animal phyla Fromm, Bastian; Hoye, Eirik; Domanska, Diana; Zhong, Xiangfu; Aparicio-Puerta, Ernesto; Ovchinnikov, Vladimir; Umu, Sinan U.; Chabot, Peter J.; Kang, Wenjing; Aslanzadeh, Morteza; Tarbier, Marcel; Marmol-Sanchez, Emilio; Urgese, Gianvito; Johansen, Morten; Hovig, Eivind; Hackenberg, Michael; Friedlander, Marc R.; Peterson, Kevin J. Share Save
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases Sweeney, Blake A.; Petrov, Anton, I; Ribas, Carlos E.; Finn, Robert D.; Bateman, Alex; Szymanski, Maciej; Karlowski, Wojciech M.; Seemann, Stefan E.; Gorodkin, Jan; Cannone, Jamie J.; Gutell, Robin R.; Kay, Simon; Marygold, Steven; dos Santos, Gil; Frankish, Adam; Mudge, Jonathan M.; Barshir, Ruth; Fishilevich, Simon; Chan, Patricia P.; Lowe, Todd M.; Seal, Ruth; Bruford, Elspeth; Panni, Simona; Porras, Pablo; Karagkouni, Dimitra; Hatzigeorgiou, Artemis G.; Ma, Lina; Zhang, Zhang; Volders, Pieter-Jan; Mestdagh, Pieter; Griffiths-Jones, Sam; Fromm, Bastian; Peterson, Kevin J.; Kalvari, Ioanna; Nawrocki, Eric P.; Petrov, Anton S.; Weng, Shuai; Bouchard-Bourelle, Philia; Scott, Michelle; Lui, Lauren M.; Hoksza, David; Lovering, Ruth C.; Kramarz, Barbara; Mani, Prita; Ramachandran, Sridhar; Weinberg, Zasha Share Save
Response to: X-linked miR-506 family miRNAs promote FMRP expression in mouse spermatogonia Ramaiah, Madhuvanthi; Tan, Kun; Plank, Terra-Dawn M.; Song, Hye-Won; Chousal, Jennifer N.; Jones, Samantha; Shum, Eleen Y.; Sheridan, Steven D.; Peterson, Kevin J.; Gromoll, Joerg; Haggarty, Stephen J.; Cook-Andersen, Heidi; Wilkinson, Miles F. Share Save
MirGeneDB 2.0: the metazoan microRNA complement (vol 48, pg D132, 2019) Fromm, Bastian; Domanska, Diana; Hoye, Eirik; Ovchinnikov, Vladimir; Kang, Wenjing; Aparicio-Puerta, Ernesto; Johansen, Morten; Flatmark, Kjersti; Mathelier, Anthony; Hovig, Eivind; Hackenberg, Michael; Friedlander, Marc R.; Peterson, Kevin J. Share Save
MirGeneDB 2.0: the metazoan microRNA complement Fromm, Bastian; Domanska, Diana; Hoye, Eirik; Ovchinnikov, Vladimir; Kang, Wenjing; Aparicio-Puerta, Ernesto; Johansen, Morten; Flatmark, Kjersti; Mathelier, Anthony; Hovig, Eivind; Hackenberg, Michael; Friedlander, Marc R.; Peterson, Kevin J. Share Save
A microRNA cluster in the Fragile-X region expressed during spermatogenesis targets FMR1 Ramaiah, Madhuvanthi; Tan, Kun; Plank, Terra-Dawn M.; Song, Hye-Won; Dumdie, Jennifer N.; Jones, Samantha; Shum, Eleen Y.; Sheridan, Steven D.; Peterson, Kevin J.; Gromoll, Joerg; Haggarty, Stephen J.; Cook-Andersen, Heidi; Wilkinson, Miles F. Share Save
Unicellular Origin of the Animal MicroRNA Machinery Brate, Jon; Neumann, Ralf S.; Fromm, Bastian; Haraldsen, Arthur A. B.; Tarver, James E.; Suga, Hiroshi; Donoghue, Philip C. J.; Peterson, Kevin J.; Ruiz-Trillo, Inaki; Grini, Paul E.; Shalchian-Tabrizi, Kamran Share Save
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Well-Annotated microRNAomes Do Not Evidence Pervasive miRNA Loss Tarver, James E.; Taylor, Richard S.; Puttick, Mark N.; Lloyd, Graeme T.; Pett, Walker; Fromm, Bastian; Schirrmeister, Bettina E.; Pisani, Davide; Peterson, Kevin J.; Donoghue, Philip C. J. Share Save
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