arrow
Back
R

Ron Shamir

blavatnik school of computer science

76H-index
516Paper Count
2.5WCitation Count
Published Papers 111
Publication Date
ProFiT-SPEci-FISH: a novel approach for linking plasmids to hosts in complex microbial communities at the single-cell level
err2025-12-02
err0
errOAAI
errAlvah Zorea; Sarah Moraïs; David Pellow; Orly Gershoni-Yahalom; Maraike Probst; Sapir Nadler; Ron Shamir; Benyamin Rosental; Natalie Elia; Itzhak Mizrahi
errShare
errSave
Fecal host transcriptomics accurately assesses endoscopic inflammatory activity in patients with inflammatory bowel diseases
err2025-01-22
err0
PREAI
errWeintraub, Y.; Segal, A.; Matar, M.; Nevo-Shor, A.; Kantor, I; Shamir, R.; Halpern, K. Bahar; Itzkovitz, S.; Yehuda-Cohen, A.; Kahan-Hanum, M.; Harnik, Y.; Shouval, D.
errShare
errSave
Drugst.One - a plug-and-play solution for online systems medicine and network-based drug repurposing
err2024-05-23
err4
errOAAI
errMaier, Andreas; Hartung, Michael; Abovsky, Mark; Adamowicz, Klaudia; Bader, Gary D.; Baier, Sylvie; Blumenthal, David B.; Chen, Jing; Elkjaer, Maria L.; Garcia-Hernandez, Carlos; Helmy, Mohamed; Hoffmann, Markus; Jurisica, Igor; Kotlyar, Max; Lazareva, Olga; Levi, Hagai; List, Markus; Lobentanzer, Sebastian; Loscalzo, Joseph; Malod-Dognin, Noel; Manz, Quirin; Matschinske, Julian; Mee, Miles; Oubounyt, Mhaned; Pastrello, Chiara; Pico, Alexander R.; Pillich, Rudolf T.; Poschenrieder, Julian M.; Pratt, Dexter; Przulj, Natasa; Sadegh, Sepideh; Saez-Rodriguez, Julio; Sarkar, Suryadipto; Shaked, Gideon; Shamir, Ron; Trummer, Nico; Turhan, Ugur; Wang, Rui-Sheng; Zolotareva, Olga; Baumbach, Jan
errShare
errSave
Plasmids in the human gut reveal neutral dispersal and recombination that is overpowered by inflammatory diseases
err2024-04-11
err1
errOAAI
errZorea, Alvah; Pellow, David; Levin, Liron; Pilosof, Shai; Friedman, Jonathan; Shamir, Ron; Mizrahi, Itzhak
errShare
errSave
The human intratumor mycobiome is significantly influenced by an individual's race
err2023-10-01
err0
PREAI
errCoster, D.; Margalit, T.; Boursi, B.; Shamir, R.
errShare
errSave
Efficient minimizer orders for large values of k using minimum decycling sets
err2023-08-09
err5
errOAAI
errPellow, David; Pu, Lianrong; Ekim, Baris; Kotlar, Lior; Berger, Bonnie; Shamir, Ron; Orenstein, Yaron
errShare
errSave
errShare
errSave
Clustering of clinical and echocardiographic phenotypes of covid-19 patients
err2023-05-31
err2
errOAAI
errShpigelman, Eran; Hochstadt, Aviram; Coster, Dan; Merdler, Ilan; Ghantous, Eihab; Szekely, Yishay; Lichter, Yael; Taieb, Philippe; Banai, Ariel; Sapir, Orly; Granot, Yoav; Lupu, Lior; Borohovitz, Ariel; Sadon, Sapir; Banai, Shmuel; Rubinshtein, Ronen; Topilsky, Yan; Shamir, Ron
errShare
errSave
A machine learning model for predicting deterioration of COVID-19 inpatients
err2022-02-16
err23
errOAAI
errNoy, Omer; Coster, Dan; Metzger, Maya; Atar, Itai; Shenhar-Tsarfaty, Shani; Berliner, Shlomo; Rahav, Galia; Rogowski, Ori; Shamir, Ron
errShare
errSave
errShare
errSave
SCAPP: an algorithm for improved plasmid assembly in metagenomes
err2021-06-25
err32
errOAAI
errPellow, David; Zorea, Alvah; Probst, Maraike; Furman, Ori; Segal, Arik; Mizrahi, Itzhak; Shamir, Ron
errShare
errSave
Classification of node-positive melanomas into prognostic subgroups using keratin, immune, and melanogenesis expression patterns
err2021-02-09
err19
errOAAI
errNetanely, Dvir; Leibou, Stav; Parikh, Roma; Stern, Neta; Vaknine, Hananya; Brenner, Ronen; Amar, Sarah; Factor, Rivi Haiat; Perluk, Tomer; Frand, Jacob; Nizri, Eran; Hershkovitz, Dov; Zemser-Werner, Valentina; Levy, Carmit; Shamir, Ron
errShare
errSave
Melanoma-Secreted Lysosomes Trigger Monocyte-Derived Dendritic Cell Apoptosis and Limit Cancer Immunotherapy
err2020-05-15
err25
errOAAI
errSantana-Magal, Nadine; Farhat-Younis, Leen; Gutwillig, Amit; Gleiberman, Annette; Rasoulouniriana, Diana; Tal, Lior; Netanely, Dvir; Shamir, Ron; Blau, Rachel; Feinmesser, Meora; Zlotnik, Oran; Gutman, Haim; Linde, Ian L.; Reticker-Flynn, Nathan E.; Rider, Peleg; Carmi, Yaron
errShare
errSave
Using the kinetics of C-reactive protein response to improve the differential diagnosis between acute bacterial and viral infections
err2019-12-24
err32
PREAI
errCoster, Dan; Wasserman, Asaf; Fisher, Eyal; Rogowski, Ori; Zeltser, David; Shapira, Itzhak; Bernstein, Daniel; Meilik, Ahuva; Raykhshtat, Eli; Halpern, Pinchas; Berliner, Shlomo; Shenhar-Tsarfaty, Shani; Shamir, Ron
errShare
errSave
Unravelling plasmidome distribution and interaction with its hosting microbiome
err2019-12-15
err23
PREAI
errKav, Aya Brown; Rozov, Roye; Bogumil, David; Sorensen, Soren Johannes; Hansen, Lars Hestbjerg; Benhar, Itai; Halperin, Eran; Shamir, Ron; Mizrahi, Itzhak
errShare
errSave