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D

Darryl Shibata

university of southern california

65H-index
325Paper Count
2.1WCitation Count
Published Papers 77
Publication Date
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Conception-calibrated male pediatric tumor mitotic clocks
errCommunications Biology
IF5.1
err2026-06-09
err0
errOAAI
errJeremiah V. John; Darryl Shibata
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Fluctuating DNA methylation tracks cancer evolution at clinical scale
errNature
IF48.5
err2025-09-10
err0
errOAAI
errCalum Gabbutt; Martí Duran-Ferrer; Heather E. Grant; Diego Mallo; Ferran Nadeu; Jacob Househam; Neus Villamor; Madlen Müller; Simon Heath; Emanuele Raineri; Olga Krali; Jessica Nordlund; Thorsten Zenz; Ivo G. Gut; Elias Campo; Armando Lopez-Guillermo; Jude Fitzgibbon; Chris P. Barnes; Darryl Shibata; José I. Martin-Subero; Trevor A. Graham
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errSave
Developmental hematopoietic stem cell variation explains clonal hematopoiesis later in life
errNATURE COMMUNICATIONS
IF15.7
err2024-11-26
err0
errOAAI
errKreger, Jesse; Mooney, Jazlyn A.; Shibata, Darryl; Maclean, Adam L.
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Large-scale, low-cost, and accurate measurement of cancer evolutionary dynamics from clinical patient samples
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errGabbutt, Calum; Duran-Ferrer, Marti; Grant, Heather; Mallo, Diego; Nadeu, Ferran; Househam, Jacob; Villamor, Neus; Krali, Olga; Nordlund, Jessica; Zenz, Thorsten; Campo, Elias; Lopez-Guillermo, Armando; Fitzgibbon, Jude; Barnes, Chris P.; Shibata, Darryl; Martin-Subero, Jose I.; Graham, Trevor A.
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errSave
Tick tock trees: Reconstructing the evolutionary dynamics of human tissues using fluctuating methylation clocks
errCANCER RESEARCH
IF16.6
err2024-02-01
err0
PREAI
errMallo, Diego; Bousquets-Munoz, Pablo; Grant, Heather E.; Shibata, Darryl; Graham, Trevor A.; Maley, Carlo C.; Gabbutt, Calum
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errSave
DNA methyltransferase deficiency modifies cancer susceptibility in mice lacking DNA mismatch repair
errMOLECULAR AND CELLULAR BIOLOGY
IF2.7
err2023-03-27
err99
errOAAI
errTrinh, BN; Long, TI; Nickel, AE; Shibata, D; Laird, PW
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Homeostasis limits keratinocyte evolution
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2022-08-23
err5
errOAAI
errSchencka, Ryan O.; Kim, Eunjung; Bravo, Rafael R.; West, Jeffrey; Leedham, Simon; Shibata, Darryl; Anderson, Alexander R. A.
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errSave
Mutation agnostic diagnosis of clonal hematopoiesis of indeterminate potential (CHIP) using fluctuating methylation clocks
errCANCER RESEARCH
IF16.6
err2022-05-15
err0
PREAI
errSchenck, Ryan O.; Jakobsen, Niels Asger; Turati, Virginia; Shibata, Darryl; Vyas, Paresh; Leedham, Simon; Anderson, Alexander R. A.
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errSave
Lineage tracing in human tissues
errJOURNAL OF PATHOLOGY
IF5.2
err2022-05-05
err7
errOAAI
errGabbutt, Calum; Wright, Nicholas A.; Baker, Ann-Marie; Shibata, Darryl; Graham, Trevor A.
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errSave
Gattaca: Base-Pair Resolution Mutation Tracking for Somatic Evolution Studies using Agent-based Models
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2022-03-17
err4
errOAAI
errSchenck, Ryan O.; Brosula, Gabriel; West, Jeffrey; Leedham, Simon; Shibata, Darryl; Anderson, Alexander R. A.
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errSave
Fluctuating methylation clocks for cell lineage tracing at high temporal resolution in human tissues
errNATURE BIOTECHNOLOGY
IF41.7
err2022-01-03
err24
errOAAI
errGabbutt, Calum; Schenck, Ryan O.; Weisenberger, Daniel J.; Kimberley, Christopher; Berner, Alison; Househam, Jacob; Lakatos, Eszter; Robertson-Tessi, Mark; Martin, Isabel; Patel, Roshani; Clark, Susan K.; Latchford, Andrew; Barnes, Chris P.; Leedham, Simon J.; Anderson, Alexander R. A.; Graham, Trevor A.; Shibata, Darryl
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errSave
Epigenetic Conservation Is a Beacon of Function: An Analysis Using Methcon5 Software for Studying Gene Methylation
errJCO CLINICAL CANCER INFORMATICS
IF2.8
err2020-11-01
err3
errOAAI
errHvitfeldt, Emil; Xia, Chao; Siegmund, Kimberly D.; Shibata, Darryl; Marjoram, Paul
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errSave
Navigating the path to distant metastasis
errNATURE GENETICS
IF31.8
err2020-07-06
err6
errOAAI
errGraham, Trevor A.; Shibata, Darryl
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errSave
Deep learned tissue fingerprints classify breast cancers by ER/PR/Her2 status from H&E images
errSCIENTIFIC REPORTS
IF3.9
err2020-04-29
err65
errOAAI
errRawat, Rishi R.; Ortega, Itzel; Roy, Preeyam; Sha, Fei; Shibata, Darryl; Ruderman, Daniel; Agus, David B.
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errSave
Minimal barriers to invasion during human colorectal tumor growth
errNATURE COMMUNICATIONS
IF15.7
err2020-03-09
err24
errOAAI
errRyser, Marc D.; Mallo, Diego; Hall, Allison; Hardman, Timothy; King, Lorraine M.; Tatishchev, Sergei; Sorribes, Inmaculada C.; Maley, Carlo C.; Marks, Jeffrey R.; Hwang, E. Shelley; Shibata, Darryl
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errSave
Cancer cell evolution through the ages
errSCIENCE
IF45.8
err2019-08-02
err3
errOAAI
errMaley, Carlo C.; Shibata, Darryl
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errSave
Deep learning tissue fingerprints to identify patients and predict clinical subtypes of breast cancer from digital pathology images
errCANCER RESEARCH
IF16.6
err2019-07-01
err0
PREAI
errRawat, Rishi; Sha, Fei; Shibata, Darryl; Ruderman, Daniel; Agus, David
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errSave
Tumorigenesis as the Paradigm of Quasi-neutral Molecular Evolution
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2019-03-26
err9
errOAAI
errChen, Bingjie; Shi, Zongkun; Chen, Qingjian; Shen, Xu; Shibata, Darryl; Wen, Haijun; Wu, Chung-I
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errSave
Somatic cell evolution: how to improve with age
errJOURNAL OF PATHOLOGY
IF5.2
err2018-11-29
err0
errOAAI
errShibata, Darryl
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errSave
Epigenetic Heterogeneity in Human Colorectal Tumors Reveals Preferential Conservation And Evidence of Immune Surveillance
errSCIENTIFIC REPORTS
IF3.9
err2018-11-23
err15
errOAAI
errRyser, Marc D.; Yu, Ming; Grady, William; Siegmund, Kimberly; Shibata, Darryl
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
H
Hans Clevers
H-index: 236 · Papers: 1.3K
E
Elı́as Campo
H-index: 173 · Papers: 1.6K
K
Kenneth J. Pienta
H-index: 142 · Papers: 1.4K
C
Charis Eng
H-index: 139 · Papers: 1.2K
A
Allan Bradley
H-index: 137 · Papers: 461
View more