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Dose-dependent IFN programs in myeloid cells after mRNA and adenovirus COVID-19 vaccination Eryilmaz, Giray; Yazici, Yilmaz Yucehan; Marches, Radu; Mimitou, Eleni P.; Kenyon-Pesce, Lisa; Handrejk, Kim; Jangra, Sonia; Schotsaert, Michael; Garcia-Sastre, Adolfo; Kuchel, George A.; Banchereau, Jacques; Ucar, Duygu Share Save
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SARS-CoV-2 induced immune perturbations in infants vary with disease severity and differ from adults' responses Nehar-Belaid, Djamel; Mejias, Asuncion; Xu, Zhaohui; Marches, Radu; Yerrabelli, Rushil; Chen, Guo; Mertz, Sara; Ye, Fang; Sanchez, Pablo J.; Tsang, John S.; Aydillo, Teresa; Miorin, Lisa; Cupic, Anastasija; Garcia-Sastre, Adolfo; Ucar, Duygu; Banchereau, Jacques F.; Pascual, Virginia; Ramilo, Octavio Share Save
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Distinct baseline immune characteristics associated with responses to conjugated and unconjugated pneumococcal polysaccharide vaccines in older adults Ravichandran, Sathyabaarathi; Erra-Diaz, Fernando; Karakaslar, Onur E.; Marches, Radu; Kenyon-Pesce, Lisa; Rossi, Robert; Chaussabel, Damien; Nehar-Belaid, Djamel; Lafon, David C.; Pascual, Virginia; Palucka, Karolina; Paust, Silke; Nahm, Moon H.; Kuchel, George A.; Banchereau, Jacques; Ucar, Duygu Share Save
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Transcriptional activation of Jun and Fos members of the AP-1 complex is a conserved signature of immune aging that contributes to inflammaging Karakaslar, Emin Onur; Katiyar, Neerja; Hasham, Muneer; Youn, Ahrim; Sharma, Siddhartha; Chung, Cheng-han; Marches, Radu; Korstanje, Ron; Banchereau, Jacques; Ucar, Duygu Share Save
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Transcriptional profiling of macrophages in situ in metastatic melanoma reveals localization-dependent phenotypes and function Martinek, Jan; Lin, Jianan; Kim, Kyung In; Wang, Victor G.; Wu, Te-Chia; Chiorazzi, Michael; Boruchov, Hannah; Gulati, Ananya; Seeniraj, Shamreethaa; Sun, Lili; Marches, Florentina; Robson, Paul; Rongvaux, Anthony; Flavell, Richard A.; George, Joshy; Chuang, Jeffrey H.; Banchereau, Jacques; Palucka, Karolina Share Save
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A comprehensive long-read isoform analysis platform and sequencing resource for breast cancer Veiga, Diogo F. T.; Nesta, Alex; Zhao, Yuqi; Mays, Anne Deslattes; Huynh, Richie; Rossi, Robert; Wu, Te-Chia; Palucka, Karolina; Anczukow, Olga; Beck, Christine R.; Banchereau, Jacques Share Save
AMULET: a novel read count-based method for effective multiplet detection from single nucleus ATAC-seq data Thibodeau, Asa; Eroglu, Alper; McGinnis, Christopher S.; Lawlor, Nathan; Nehar-Belaid, Djamel; Kursawe, Romy; Marches, Radu; Conrad, Daniel N.; Kuchel, George A.; Gartner, Zev J.; Banchereau, Jacques; Stitzel, Michael L.; Cicek, A. Ercument; Ucar, Duygu Share Save
Development of a fixed module repertoire for the analysis and interpretation of blood transcriptome data Altman, Matthew C.; Rinchai, Darawan; Baldwin, Nicole; Toufiq, Mohammed; Whalen, Elizabeth; Garand, Mathieu; Kabeer, Basirudeen Syed Ahamed; Alfaki, Mohamed; Presnell, Scott R.; Khaenam, Prasong; Ayllon-Benitez, Aaron; Mougin, Fleur; Thebault, Patricia; Chiche, Laurent; Jourde-Chiche, Noemie; Phillips, J. Theodore; Klintmalm, Goran; O'Garra, Anne; Berry, Matthew; Bloom, Chloe; Wilkinson, Robert J.; Graham, Christine M.; Lipman, Marc; Lertmemongkolchai, Ganjana; Bedognetti, Davide; Thiebaut, Rodolphe; Kheradmand, Farrah; Mejias, Asuncion; Ramilo, Octavio; Palucka, Karolina; Pascual, Virginia; Banchereau, Jacques; Chaussabel, Damien Share Save
Human KIT+ myeloid cells facilitate visceral metastasis by melanoma Yu, Chun I.; Martinek, Jan; Wu, Te-Chia; Kim, Kyung In; George, Joshy; Ahmadzadeh, Elaheh; Maser, Rick; Marches, Florentina; Metang, Patrick; Authie, Pierre; Oliveira, Vanessa K. P.; Wang, Victor G.; Chuang, Jeffrey H.; Robson, Paul; Banchereau, Jacques; Palucka, Karolina Share Save
Single Cell Analysis of Blood Mononuclear Cells Stimulated Through Either LPS or Anti-CD3 and Anti-CD28 Lawlor, Nathan; Nehar-Belaid, Djamel; Grassmann, Jessica D. S.; Stoeckius, Marlon; Smibert, Peter; Stitzel, Michael L.; Pascual, Virginia; Banchereau, Jacques; Williams, Adam; Ucar, Duygu Share Save
MEK inhibition reprograms CD8+ T lymphocytes into memory stem cells with potent antitumor effects Verma, Vivek; Jafarzadeh, Nazli; Boi, Shannon; Kundu, Subhadip; Jiang, Zhinuo; Fan, Yiping; Lopez, Jose; Nandre, Rahul; Zeng, Peng; Alolaqi, Fatmah; Ahmad, Shamim; Gaur, Pankaj; Barry, Simon T.; Valge-Archer, Viia E.; Smith, Paul D.; Banchereau, Jacques; Mkrtichyan, Mikayel; Youngblood, Benjamin; Rodriguez, Paulo C.; Gupta, Seema; Khleif, Samir N. Share Save
Transcriptional profiles of CD14+cells in situ in melanoma reveal plasticity, localization dependent function and specific T cell interactions Martinek, Jan; Kim, Kyung In; Lin, Jianan; Wu, Te-Chia; Borouchov, Hannah; Gulati, Ananya; Sun, Lili; Wang, Victor; George, Joshy; Henrich, Philipp; Marches, Florentina; Rongvaux, Anthony; Chiorazzi, Michael; Chuang, Jeffrey H.; Robson, Paul; Flavell, Richard; Banchereau, Jacques; Palucka, Karolina Share Save
Mapping systemic lupus erythematosus heterogeneity at the single-cell level Nehar-Belaid, Djamel; Hong, Seunghee; Marches, Radu; Chen, Guo; Bolisetty, Mohan; Baisch, Jeanine; Walters, Lynnette; Punaro, Marilynn; Rossi, Robert J.; Chung, Cheng-Han; Huynh, Richie P.; Singh, Prashant; Flynn, William F.; Tabanor-Gayle, Joy-Ann; Kuchipudi, Navya; Mejias, Asuncion; Collet, Magalie A.; Lucido, Anna Lisa; Palucka, Karolina; Robson, Paul; Lakshminarayanan, Santhanam; Ramilo, Octavio; Wright, Tracey; Pascual, Virginia; Banchereau, Jacques F. Share Save
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