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Benjamin D. Greenbaum

memorial sloan kettering cancer center

49H-index
308Paper Count
1.4WCitation Count
Published Papers 76
Publication Date
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Associative memory plays a role in ER-1α positive breast cancers
errCell Death and Differentiation
IF15.4
err2026-07-31
err0
errOAAI
errDan Lu; David Hoyos; Ning Yao; Benjamin Greenbaum; Yael Aylon; Moshe Oren; Arnold J. Levine
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Distinct genomic and immunologic tumor evolution in germline TP53-driven breast cancers
errNature Communications
IF15.7
err2026-05-21
err0
errOAAI
errNabamita Boruah; David Hoyos; Renyta Moses; Ryan Hausler; Heena Desai; Anh N. Le; Madeline Good; Gregory Kelly; Ashvathi Raghavakaimal; Maliha Tayeb; Mohana Narasimhamurthy; Abigail Doucette; Peter Gabriel; Michael J. Feldman; Jinae Park; Miguel Lopez de Rodas; Kurt A. Schalper; Shari B. Goldfarb; Anupma Nayak; Arnold J. Levine; Benjamin D. Greenbaum; Kara N. Maxwell
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errSave
Neoantigenic properties of TP53 variants influence cancer risk in individuals with Li-Fraumeni syndrome
erreBioMedicine
IF10.8
err2025-12-09
err0
errOAAI
errEmilie Montellier; Olivier Manches; Jonathan Gaucher; Claire Freycon; David Hoyos; Sandrine Blanchet; Murielle Verboom; Christina M. Dutzmann; Sophie Coutant; Jacqueline Bou; Bertrand Fin; Robert Olaso; Jean-François Deleuze; Thierry Frébourg; Benjamin D. Greenbaum; Arnold J. Levine; Christian P. Kratz; Gaëlle Bougeard; Pierre Hainaut
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errSave
Repeats mimic pathogen-associated patterns across a vast evolutionary landscape
errCell Genomics
IF9
err2025-09-24
err0
errOAAI
errPetr Šulc; Andrea Di Gioacchino; Alexander Solovyov; Siyu Sun; Stephen Martis; Sajid A. Marhon; Håvard T. Lindholm; Raymond Chen; Amir Hosseini; Hua Jiang; Bao-Han Ly; Martin S. Taylor; Parinaz Mehdipour; Omar Abdel-Wahab; Nicole Rusk; Nicolas Vabret; John LaCava; Daniel D. De Carvalho; Rémi Monasson; Simona Cocco; Benjamin D. Greenbaum
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Deciphering the Code of Viral-Host Adaptation Through Maximum-Entropy Nucleotide Bias Models
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2025-06-01
err1
errOAAI
errDi Gioacchino, Andrea; Lecce, Ivan; Greenbaum, Benjamin D.; Monasson, Remi; Cocco, Simona
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Molecular Heterogeneity and Immune Infiltration Drive Clinical Outcomes in Upper Tract Urothelial Carcinoma
errEUROPEAN UROLOGY
IF25.2
err2025-03-01
err1
errOAAI
errKim, Kwanghee; Alam, Syed M.; Kuo, Fengshen; Chen, Ziyu; Yip, Wesley; Katims, Andrew B.; Chu, Carissa; Lenis, Andrew T.; Hu, Wenhuo; Ozcan, Gamze Gokturk; Chen, Jie-Fu; Firouzi, Sanaz; Elhanati, Yuval; Clinton, Timothy N.; Aulitzky, Andreas; Almassi, Nima; Fujii, Yoich; Tracey, Andrew T.; Reisz, Peter A.; Budhu, Sadna; Vuong, Lynda; Eichholz, Jordan; Woo, Hyung Jun; Nogueira, Lucas; Gao, Sizhi P.; Scherz, Avigdor; Aggen, David H.; Rosenberg, Jonathan E.; Pietzak, Eugene J.; Seshan, Venkatraman; Greenbaum, Benjamin; Becker, Anton; Akin, Oguz; Iyer, Gopa; Al-Ahmadie, Hikmat; Hakimi, A. Ari; Merghoub, Taha; Coleman, Jonathan A.
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Interferon response and epigenetic modulation by SMARCA4 mutations drive ovarian tumor immunogenicity
errSCIENCE ADVANCES
IF12.5
err2024-12-06
err0
PREAI
errBrodeur, Melica Nourmoussavi; Dopeso, Higinio; Zhu, Yingjie; Longhini, Ana Leda F.; Gazzo, Andrea; Sun, Siyu; Koche, Richard P.; Qu, Rui; Rosenberg, Laura; Hamard, Pierre-Jacques; Bykov, Yonina; Green, Hunter; Gusain, Laxmi; Chiappinelli, Katherine B.; Ozsoy, Melih Arda; Chui, M. Herman; Basili, Thais; Gardner, Rui; Walderich, Sven; Destanchina, Elisa; Greenbaum, Benjamin; Gonen, Mithat; Vabret, Nicolas; Weigelt, Britta; Zamarin, Dmitriy
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errSave
Cancer cells restrict immunogenicity of retrotransposon expression via distinct mechanisms
errIMMUNITY
IF26.3
err2024-12-01
err2
errOAAI
errSun, Siyu; You, Eunae; Hong, Jungeui; Hoyos, David; Del Priore, Isabella; Tsanov, Kaloyan M.; Mattagajasingh, Om; Di Gioacchino, Andrea; Marhon, Sajid A.; Chacon-Barahona, Jonathan; Li, Hao; Jiang, Hua; Hozeifi, Samira; Rosas-Bringas, Omar; Xu, Katherine H.; Song, Yuhui; Lang, Evan R.; Rojas, Alexandra S.; Nieman, Linda T.; Patel, Bidish K.; Murali, Rajmohan; Chanda, Pharto; Karacay, Ali; Vabret, Nicolas; De Carvalho, Daniel D.; Zenklusen, Daniel; Lacava, John; Lowe, Scott W.; Ting, David T.; lacobuzio-Donahue, Christine A.; Solovyov, Alexander; Greenbaum, Benjamin D.
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errSave
Single-Cell Spatial Transcriptomics Identifies Lymphoid Aggregates with Location-Specific Alterations of Adaptive Immune Cells in Human MDS Bone Marrow
errBLOOD
IF23.1
err2024-11-05
err0
PREAI
errStanley, Robert; Zhang, Beatrice; Argyropoulos, Kimon, V; Gipson, Brianna; Weis, Kenyon; Lewis, Alexander M.; Katsamakis, Zoe; Zhao, Karen; Snopkowski, Catherine; Zatzman, Matthew; Fan, Ning; Chaligne, Ronan; Bhanot, Umesh; Roshal, Mikhail; Dogan, Ahmet; Greenbaum, Benjamin D.; Stein, Eytan M.; Brink, Marcel R. M. van den; Abdel-Wahab, Omar; Dewolf, Susan
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LINE-1 ORF1p mimics viral innate immune evasion mechanisms in pancreatic cancer
errCANCER RESEARCH
IF16.6
err2024-09-15
err0
PREAI
errYou, Eunae; Patel, Bidish; Rojas, Alexandra; Sun, Siyu; Ho, Natalie; Phillips, Ildiko; Raabe, Michael; Song, Yuhui; Xu, Katherine; Kocher, Joshua; Richieri, Peter; Taylor, Martin; Nieman, Linda; Greenbaum, Benjamin; Ting, David
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errSave
Repeat RNA mediated disruption of cellular plasticity in pancreatic cancer
errCANCER RESEARCH
IF16.6
err2024-09-15
err0
PREAI
errYou, Eunae; Danaher, Patrick; Lu, Chenyue; Sun, Siyu; Zou, Luli; Phillips, Ildiko; Rojas, Alexandra; Ho, Natalie; Song, Yuhui; Raabe, Michael; Xu, Katherine; Richieri, Peter; Li, Hao; Aston, Natalie; Porter, Rebecca; Patel, Bidish; Nieman, Linda; Schurman, Nathan; Hudson, Briana; North, Khrystyna; Church, Sarah; Deshpande, Vikram; Liss, Andrew; Kim, Tae; Cui, Yi; Kim, Youngmi; Greenbaum, Benjamin; Aryee, Martin; Ting, David
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errSave
Evolution of anti-viral and anti-tumor immunity in tumors in response to oncolytic virus therapy
errCANCER RESEARCH
IF16.6
err2024-04-05
err0
PREAI
errLyudovyk, Olga; Burman, Bharat; Ceglia, Nicholas; Greenbaum, Benjamin; Elhanati, Yuval; Zamarin, Dmitriy
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errSave
Rapid autopsy reveals the interplay of tumor heterogeneity at genomic, transcriptomic, and spatial dimensions
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errYao, Ning; Vanguri, Rami; Patel, Juber; Lihm, Jayon; Fisher, Andrew; Jarchum, Irene; Umeda, Shigeaki; Li, Hao; Ely, Scott; Hollmann, Travis; Iacobuzio-Donahue, Christine; Greenbaum, Benjamin
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Modeling tumor immunoediting under immune selective pressure to inform neoantigen landscape dynamics for effective cancer vaccines
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errGeorge, Mariam Mathew; Lihm, Jayon; Choi, Hyejin; Elhanati, Yuval; Martis, Stephen; Luksza, Marta; Greenbaum, Benjamin; Wolchok, Jedd D.; Merghoub, Taha
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Lag3 blockade enhances the anti-tumor effect of dual GITR agonism and PD-1 blockade in a preclinical melanoma model
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errManiyar, Rachana R.; Elhanati, Yuval; Mangarin, Levi; Marouf, Yacine; Ahmed, Ashley; Greenbaum, Benjamin; Wolchok, Jedd; Merghoub, Taha
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errSave
Human LINE-1 ORF1p retrotransposition independent function in pancreatic cancer
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errYou, Eunae; Patel, Bidish; Rojas, Alexandra; Ho, Natalie; Sun, Siyu; Raabe, Michael; Song, Yuhui; Phillips, Ildiko; Xu, Katherine; Richieri, Peter; Nieman, Linda; Greenbaum, Benjamin; Ting, David
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errSave
Retroelement decay by the exonuclease XRN1 is a viral mimicry dependency in cancer
errCELL REPORTS
IF6.9
err2024-02-01
err5
errOAAI
errHosseini, Amir; Lindholm, Havard T.; Chen, Raymond; Mehdipour, Parinaz; Marhon, Sajid A.; Ishak, Charles A.; Moore, Paul C.; Classon, Marie; Gioacchino, Raymond Andrea Di; Greenbaum, Benjamin; Carvalho, Daniel D. De
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Topographical investigation of metabolites in excised squares (TIMES2): Mapping in vivo of metabolic heterogeneity in pancreatic tumors
errCANCER RESEARCH
IF16.6
err2024-01-16
err0
PREAI
errYu, Peter; Banh, Robert; Martis, Stephen; Biancur, Douglas; Sohn, Albert; Lin, Elaine; Yamamoto, Keisuke; Greenbaum, Benjamin; Kimmelman, Alec
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errSave
Trade-offs inside the black box of neoantigen prediction
errIMMUNITY
IF26.3
err2023-11-01
err0
errOAAI
errYao, Ning; Greenbaum, Benjamin D.
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errSave
Systematic evaluation of AML-associated antigens identifies anti-U5 SNRNP200 therapeutic antibodies for the treatment of acute myeloid leukemia
errNATURE CANCER
IF28.5
err2023-10-23
err4
errOAAI
errKnorr, Katherine; Rahman, Jahan; Erickson, Caroline; Wang, Eric; Monetti, Mara; Li, Zhuoning; Ortiz-Pacheco, Juliana; Jones, Andrew; Lu, Sydney X.; Stanley, Robert F.; Baez, Maria; Fox, Nina; Castro, Cynthia; Marino, Alessandra E.; Jiang, Caroline; Penson, Alex; Hogg, Simon J.; Mi, Xiaoli; Nakajima, Hideaki; Kunimoto, Hiroyoshi; Nishimura, Koutarou; Inoue, Daichi; Greenbaum, Benjamin; Knorr, David; Ravetch, Jeffrey; Abdel-Wahab, Omar
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Research Directions

No research directions
Co-authors
Cooperation Journals
G
Gad Getz
H-index: 248 · Papers: 1.8K
E
Elaine R. Mardis
H-index: 197 · Papers: 1.7K
J
Jedd D. Wolchok
H-index: 173 · Papers: 1.4K
M
Malik Peiris
H-index: 167 · Papers: 1.5K
E
Edward C. Holmes
H-index: 165 · Papers: 1.2K
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