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Shelley L. Berger

University of Pennsylvania

117H-index
499Paper Count
5.8WCitation Count
Published Papers 153
Publication Date
Structure of the NAT10 acetyltransferase and mechanism of tRNA acetylation
err2026-06-20
err0
errOAAI
errMingyang Zhou; Supuni Thalalla Gamage; Khoa A. Tran; David Bartee; Xuepeng Wei; Boyu Yin; Shelley Berger; Jordan L. Meier; Ronen Marmorstein
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Clinical and molecular dissection of CAR T cell resistance in pancreatic cancer
err2025-08-18
err0
errOAAI
errM. Angela Aznar; Charly R. Good; Julie S. Barber-Rotenberg; Sangya Agarwal; Wesley Wilson; Alex Watts; Zhen Zhang; Donna Gonzales; Greg Donahue; Wei-Ting Hwang; Austin K. Rennels; Andrew J. Rech; Shunichiro Kuramitsu; Hua Huang; Karl M. Glastad; Katherine A. Alexander; Gabriela Plesa; Emily Dowd; Andrea Brennan; Donald L. Siegel; Janos Tanyi; Andrew Haas; Drew A. Torigian; Gregory Nadolski; Vanessa E. Gonzalez; Elizabeth O. Hexner; Joseph A. Fraietta; Julie K. Jadlowsky; Regina M. Young; Shelley L. Berger; Carl H. June; Mark H. O’Hara
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Neuropeptides specify and reprogram division of labor in the leafcutter ant Atta cephalotes
errCell
IF42.5
err2025-06-11
err0
errOAAI
errMichael B. Gilbert; Karl M. Glastad; Maxxum Fioriti; Matan Sorek; Tierney Scarpa; Freddy S. Purnell; Daniel Xu; Lindsay K. Pino; Anatoly Korotkov; Ali Biashad; Josue Baeza; Richard Lauman; Anastasiia Filippova; Balint Z. Kacsoh; Roberto Bonasio; Mackenzie W. Mathis; Benjamin A. Garcia; Andrei Seluanov; Vera Gorbunova; Shelley L. Berger
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TET2 regulates early and late transitions in exhausted CD8+ T cell differentiation and limits CAR T cell function
err2024-11-15
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errOAAI
errDimitri, Alexander J.; Baxter, Amy E.; Chen, Gregory M.; Hopkins, Caitlin R.; Rouin, Geoffrey T.; Huang, Hua; Kong, Weimin; Holliday, Christopher H.; Wiebking, Volker; Bartoszek, Robert; Drury, Sydney; Dalton, Katherine; Koucky, Owen M.; Chen, Zeyu; Giles, Josephine R.; Dils, Alexander T.; Jung, In-Young; O'Connor, Roddy; Collins, Sierra; Everett, John K.; Amses, Kevin; Sherrill-Mix, Scott; Chandra, Aditi; Goldman, Naomi; Vahedi, Golnaz; Jadlowsky, Julie K.; Young, Regina M.; Melenhorst, Jan Joseph; Maude, Shannon L.; Levine, Bruce L.; Frey, Noelle V.; Berger, Shelley L.; Grupp, Stephan A.; Porter, David L.; Herbst, Friederike; Porteus, Matthew H.; Carty, Shannon A.; Bushman, Frederic D.; Weber, Evan W.; Wherry, E. John; Jordan, Martha S.; Fraietta, Joseph A.
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Histone chaperone HIRA, promyelocytic leukemia protein, and p62/SQSTM1 coordinate to regulate inflammation during cell senescence
err2024-09-01
err1
PREAI
errDasgupta, Nirmalya; Lei, Xue; Shi, Christina Huan; Arnold, Rouven; Teneche, Marcos G.; Miller, Karl N.; Rajesh, Adarsh; Davis, Andrew; Anschau, Valesca; Campos, Alexandre R.; Gilson, Rebecca; Havas, Aaron; Yin, Shanshan; Chua, Zong Ming; Liu, Tianhui; Proulx, Jessica; Alcaraz, Michael; Rather, Mohammed Iqbal; Baeza, Josue; Schultz, David C.; Yip, Kevin Y.; Berger, Shelley L.; Adams, Peter D.
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METTL3-mediated chromatin contacts promote stress granule phase separation through metabolic reprogramming during senescence
err2024-06-26
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errOAAI
errWang, Chen; Tanizawa, Hideki; Hill, Connor; Havas, Aaron; Zhang, Qiang; Liao, Liping; Hao, Xue; Lei, Xue; Wang, Lu; Nie, Hao; Qi, Yuan; Tian, Bin; Gardini, Alessandro; Kossenkov, Andrew V.; Goldman, Aaron; Berger, Shelley L.; Noma, Ken-ichi; Adams, Peter D.; Zhang, Rugang
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TXNRD1 drives the innate immune response in senescent cells with implications for age-associated inflammation
err2024-01-24
err4
errOAAI
errHao, Xue; Zhao, Bo; Towers, Martina; Liao, Liping; Monteiro, Edgar Luzete; Xu, Xin; Freeman, Christina; Peng, Hongzhuang; Tang, Hsin-Yao; Havas, Aaron; Kossenkov, Andrew V.; Berger, Shelley L.; Adams, Peter D.; Speicher, David W.; Schultz, David; Marmorstein, Ronen; Zaret, Kenneth S.; Zhang, Rugang
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Histone acetylation in an Alzheimer's disease cell model promotes homeostatic amyloid-reducing pathways
err2024-01-02
err7
errOAAI
errXu, Daniel C.; Sas-Nowosielska, Hanna; Donahue, Greg; Huang, Hua; Pourshafie, Naemeh; Good, Charly R.; Berger, Shelley L.
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Stat5 opposes the transcription factor Tox and rewires exhausted CD8+T cells toward durable effector-like states during chronic antigen exposure
errIMMUNITY
IF26.3
err2023-12-01
err22
errOAAI
errBeltra, Jean-Christophe; Abdel-Hakeem, Mohamed S.; Manne, Sasikanth; Zhang, Zhen; Huang, Hua; Kurachi, Makoto; Su, Leon; Picton, Lora; Ngiow, Shin Foong; Muroyama, Yuki; Casella, Valentina; Huang, Yinghui J.; Giles, Josephine R.; Mathew, Divij; Belman, Jonathan; Klapholz, Max; Decaluwe, Helene; Huang, Alexander C.; Berger, Shelley L.; Garcia, K. Christopher; Wherry, E. John
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In-speck-ting the nucleus: Nuclear speckles are a critical layer of gene regulation that predict outcomes in clear cell renal cell carcinoma.
err2023-08-15
err0
PREAI
errAlexander, Katherine A.; Yu, Ruofan; Faunce, Christine; Skuli, Nicolas; Coffey, Nathan; Nguyen, Son; Biddle, Nicholas; Li, Catherine; Joyce, Eric; Raj, Arjun; Simon, M. Celeste; Berger, Shelley
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TOX2 coordinates with TET2 to positively regulate central memory differentiation in human CAR T cells
err2023-07-21
err7
errOAAI
errCollins, Sierra M.; Alexander, Katherine A.; Lundh, Stefan; Dimitri, Alexander J.; Zhang, Zhen; Good, Charly R.; Fraietta, Joseph A.; Berger, Shelley L.
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The SWI/SNF chromatin remodeling complexes BAF and PBAF differentially regulate epigenetic transitions in exhausted CD8+T cells
errIMMUNITY
IF26.3
err2023-06-01
err22
errOAAI
errBaxter, Amy E.; Huang, Hua; Giles, Josephine R.; Chen, Zeyu; Wu, Jennifer E.; Drury, Sydney; Dalton, Katherine; Park, Simone L.; Torres, Leonel; Simone, Brandon W.; Klapholz, Max; Ngiow, Shin Foong; Freilich, Elizabeth; Manne, Sasikanth; Alcalde, Victor; Ekshyyan, Viktoriya; Berger, Shelley L.; Shi, Junwei; Jordan, Martha S.; Wherry, John
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Tissue-resident memory CAR T cells with stem-like characteristics display enhanced efficacy against solid and liquid tumors
err2023-06-01
err24
errOAAI
errJung, In -Young; Noguera-Ortega, Estela; Bartoszek, Robert; Collins, Sierra M.; Williams, Erik; Davis, Megan; Jadlowsky, Julie K.; Plesa, Gabriela; Siegel, Donald L.; Chew, Anne; Levine, Bruce L.; Berger, Shelley L.; Moon, Edmund K.; Albelda, Steven M.; Fraietta, Joseph A.
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Efficient engineering of human and mouse primary cells using peptide-assisted genome editing
err2023-04-24
err35
PREAI
errZhang, Zhen; Baxter, Amy E. E.; Ren, Diqiu; Qin, Kunhua; Chen, Zeyu; Collins, Sierra M. M.; Huang, Hua; Komar, Chad A. A.; Bailer, Peter F. F.; Parker, Jared B. B.; Blobel, Gerd A. A.; Kohli, Rahul M. M.; Wherry, E. John; Berger, Shelley L. L.; Shi, Junwei
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Type I Interferon Signaling via the EGR2 Transcriptional Regulator Potentiates CAR T Cell-Intrinsic Dysfunction
err2023-04-03
err10
errOAAI
errJung, In-Young; Bartoszek, Robert L.; Rech, Andrew J.; Collins, Sierra M.; Ooi, Soon-Keat; Williams, Erik F.; Hopkins, Caitlin R.; Narayan, Vivek; Haas, Naomi B.; Frey, Noelle V.; Hexner, Elizabeth O.; Siegel, Donald L.; Plesa, Gabriela; Porter, David L.; Cantu, Adrian; Everett, John K.; Guedan, Sonia; Berger, Shelley L.; Bushman, Frederic D.; Herbst, Friederike; Fraietta, Joseph A.
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Spurious intragenic transcription is a feature of mammalian cellular senescence and tissue aging
err2023-03-30
err14
errOAAI
errSen, Payel; Donahue, Greg; Li, Catherine; Egervari, Gabor; Yang, Na; Lan, Yemin; Robertson, Neil; Shah, Parisha P.; Kerkhoven, Erik; Schultz, David C.; Adams, Peter D.; Berger, Shelley L.
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Inhibition of TATA-binding protein function by SAGA subunits Spt3 and Spt8 at Gcn4-activated promoters
err2023-03-28
err137
errOAAI
errBelotserkovskaya, R; Sterner, DE; Deng, M; Sayre, MH; Lieberman, PM; Berger, SL
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