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Lineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites Siegel, Sasha V.; Trimarsanto, Hidayat; Amato, Roberto; Murie, Kathryn; Taylor, Aimee R.; Sutanto, Edwin; Kleinecke, Mariana; Whitton, Georgia; Watson, James A.; Imwong, Mallika; Assefa, Ashenafi; Rahim, Awab Ghulam; Nguyen, Hoang Chau; Tran, Tinh Hien; Green, Justin A.; Koh, Gavin C. K. W.; White, Nicholas J.; Day, Nicholas; Kwiatkowski, Dominic P.; Rayner, Julian C.; Price, Ric N.; Auburn, Sarah Share Save
Genomic analysis of Plasmodium vivax describes patterns of connectivity and putative drivers of adaptation in Ethiopia Kebede, Alebachew Messele; Sutanto, Edwin; Trimarsanto, Hidayat; Benavente, Ernest Diez; Barnes, Mariana; Pearson, Richard D.; Siegel, Sasha V.; Erko, Berhanu; Assefa, Ashenafi; Getachew, Sisay; Aseffa, Abraham; Petros, Beyene; Lo, Eugenia; Mohammed, Rezika; Yilma, Daniel; Rumaseb, Angela; Nosten, Francois; Noviyanti, Rintis; Rayner, Julian C.; Kwiatkowski, Dominic P.; Price, Ric N.; Golassa, Lemu; Auburn, Sarah Share Save
Genomics of Plasmodium vivax in Colombia reveals evidence of local bottle-necking and inter-country connectivity in the Americas Sutanto, Edwin; Pava, Zuleima; Echeverry, Diego F.; Lopera-Mesa, Tatiana M.; Montenegro, Lidia Madeline; Yasnot-Acosta, Maria F.; Benavente, Ernest Diez; Pearson, Richard D.; Herrera, Socrates; Arevalo-Herrera, Myriam; Trimarsanto, Hidayat; Rumaseb, Angela; Noviyanti, Rintis; Kwiatkowski, Dominic P.; Price, Ric N.; Auburn, Sarah Share Save
Genome-wide association studies reveal novel loci associated with pyrethroid and organophosphate resistance in Anopheles gambiae and Anopheles coluzzii Lucas, Eric R.; Nagi, Sanjay C.; Egyir-Yawson, Alexander; Essandoh, John; Dadzie, Samuel; Chabi, Joseph; Djogbenou, Luc S.; Medjigbodo, Adande A.; Edi, Constant V.; Ketoh, Guillaume K.; Koudou, Benjamin G.; Van't Hof, Arjen E.; Rippon, Emily J.; Pipini, Dimitra; Harding, Nicholas J.; Dyer, Naomi A.; Cerdeira, Louise T.; Clarkson, Chris S.; Kwiatkowski, Dominic P.; Miles, Alistair; Donnelly, Martin J.; Weetman, David Share Save
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Malaria outbreak in Laos driven by a selective sweep for Plasmodium falciparum kelch13 R539T mutants: a genetic epidemiology analysis Wasakul, Varanya; Disratthakit, Areeya; Mayxay, Mayfong; Chindavongsa, Keobouphaphone; Sengsavath, Viengphone; Thuy-Nhien, Nguyen; Pearson, Richard D.; Phalivong, Sonexay; Xayvanghang, Saiamphone; Maude, Richard J.; Goncalves, Sonia; Day, Nicholas P.; Newton, Paul N.; Ashley, Elizabeth A.; Kwiatkowski, Dominic P.; Dondorp, Arjen M.; Miotto, Olivo Share Save
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A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria Trimarsanto, Hidayat; Amato, Roberto; Pearson, Richard D.; Sutanto, Edwin; Noviyanti, Rintis; Trianty, Leily; Marfurt, Jutta; Pava, Zuleima; Echeverry, Diego F.; Lopera-Mesa, Tatiana M.; Montenegro, Lidia M.; Tobon-Castano, Alberto; Grigg, Matthew J.; Barber, Bridget; William, Timothy; Anstey, Nicholas M.; Getachew, Sisay; Petros, Beyene; Aseffa, Abraham; Assefa, Ashenafi; Rahim, Awab G.; Chau, Nguyen H.; Hien, Tran T.; Alam, Mohammad S.; Khan, Wasif A.; Ley, Benedikt; Thriemer, Kamala; Wangchuck, Sonam; Hamedi, Yaghoob; Adam, Ishag; Liu, Yaobao; Gao, Qi; Sriprawat, Kanlaya; Ferreira, Marcelo U.; Laman, Moses; Barry, Alyssa; Mueller, Ivo; Lacerda, Marcus V. G.; Llanos-Cuentas, Alejandro; Krudsood, Srivicha; Lon, Chanthap; Mohammed, Rezika; Yilma, Daniel; Pereira, Dhelio B.; Espino, Fe E. J.; Chu, Cindy S.; Velez, Ivan D.; Namaik-larp, Chayadol; Villegas, Maria F.; Green, Justin A.; Koh, Gavin; Rayner, Julian C.; Drury, Eleanor; Goncalves, Sonia; Simpson, Victoria; Miotto, Olivo; Miles, Alistair; White, Nicholas J.; Nosten, Francois; Kwiatkowski, Dominic P.; Price, Ric N.; Auburn, Sarah Share Save
Population genomics reveal distinct and diverging populations of An. minimus in Cambodia St. Laurent, Brandyce; Harding, Nick; Deason, Nick; Oy, Kolthida; Sok Loeun, Chea; Sary, Men; Sunly, Rous; Nhep, Sen; Drury, Eleanor; Rockett, Kirk; Sovannaroth, Siv; Goncalves, Sonia; Kwiatkowski, Dominic; Miles, Alistair Share Save
BIRC6 modifies risk of invasive bacterial infection in Kenyan children Gilchrist, James J.; Kariuki, Silvia N.; Watson, James A.; Band, Gavin; Uyoga, Sophie; Ndila, Carolyne M.; Mturi, Neema; Mwarumba, Salim; Mohammed, Shebe; Mosobo, Moses; Alasoo, Kaur; Rockett, Kirk A.; Mentzer, Alexander J.; Kwiatkowski, Dominic P.; Hill, Adrian V. S.; Maitland, Kathryn; Scott, J. Anthony G.; Williams, Thomas N.; Young, Alexander Share Save
Genetic surveillance in the Greater Mekong subregion and South Asia to support malaria control and elimination Jacob, Christopher G.; Nguyen Thuy-Nhien; Mayxay, Mayfong; Maude, Richard J.; Huynh Hong Quang; Hongvanthong, Bouasy; Vanisaveth, Viengxay; Thang Ngo Duc; Rekol, Huy; van der Pluijm, Rob; von Seidlein, Lorenz; Fairhurst, Rick; Nosten, Francois; Hossain, Md Amir; Park, Naomi; Goodwin, Scott; Ringwald, Pascal; Chindavongsa, Keobouphaphone; Newton, Paul; Ashley, Elizabeth; Phalivong, Sonexay; Maude, Rapeephan; Leang, Rithea; Huch, Cheah; Le Thanh Dong; Kim-Tuyen Nguyen; Tran Minh Nhat; Tran Tinh Hien; Hoa Nguyen; Zdrojewski, Nicole; Canavati, Sara; Abu Sayeed, Abdullah; Uddin, Didar; Buckee, Caroline; Fanello, Caterina, I; Onyamboko, Marie; Peto, Thomas; Tripura, Rupam; Amaratunga, Chanaki; Aung Myint Thu; Delmas, Gilles; Landier, Jordi; Parker, Daniel M.; Nguyen Hoang Chau; Lek, Dysoley; Suon, Seila; Callery, James; Jittamala, Podjanee; Hanboonkunupakarn, Borimas; Pukrittayakamee, Sasithon; Phyo, Aung Pyae; Smithuis, Frank; Lin, Khin; Thant, Myo; Hlaing, Tin Maung; Satpathi, Parthasarathi; Satpathi, Sanghamitra; Behera, Prativa K.; Tripura, Amar; Baidya, Subrata; Valecha, Neena; Anvikar, Anupkumar R.; Ul Islam, Akhter; Faiz, Abul; Kunasol, Chanon; Drury, Eleanor; Kekre, Mihir; Ali, Mozam; Love, Katie; Rajatileka, Shavanthi; Jeffreys, Anna E.; Rowlands, Kate; Hubbart, Christina S.; Dhorda, Mehul; Vongpromek, Ranitha; Kotanan, Namfon; Wongnak, Phrutsamon; Garcia, Jacob Almagro; Pearson, Richard D.; Ariani, Cristina, V; Chookajorn, Thanat; Malangone, Cinzia; Nguyen, T.; Stalker, Jim; Jeffery, Ben; Keatley, Jonathan; Johnson, Kimberly J.; Muddyman, Dawn; Chan, Xin Hui S.; Sillitoe, John; Amato, Roberto; Simpson, Victoria; Goncalves, Sonia; Rockett, Kirk; Day, Nicholas P.; Dondorp, Arjen M.; Kwiatkowski, Dominic P.; Miotto, Olivo Share Save
A targeted amplicon sequencing panel to simultaneously identify mosquito species and Plasmodium presence across the entire Anopheles genus Makunin, Alex; Korlevic, Petra; Park, Naomi; Goodwin, Scott; Waterhouse, Robert M.; von Wyschetzki, Katharina; Jacob, Christopher G.; Davies, Robert; Kwiatkowski, Dominic; St Laurent, Brandyce; Ayala, Diego; Lawniczak, Mara K. N. Share Save
Malaria is a cause of iron deficiency in African children Muriuki, John Muthii; Mentzer, Alexander J.; Mitchell, Ruth; Webb, Emily L.; Etyang, Anthony O.; Kyobutungi, Catherine; Morovat, Alireza; Kimita, Wandia; Ndungu, Francis M.; Macharia, Alex W.; Ngetsa, Caroline J.; Makale, Johnstone; Lule, Swaib A.; Musani, Solomon K.; Raffield, Laura M.; Cutland, Clare L.; Sirima, Sodiomon B.; Diarra, Amidou; Tiono, Alfred B.; Fried, Michal; Gwamaka, Moses; Adu-Afarwuah, Seth; Wirth, James P.; Wegmueller, Rita; Madhi, Shabir A.; Snow, Robert W.; Hill, Adrian V. S.; Rockett, Kirk A.; Sandhu, Manjinder S.; Kwiatkowski, Dominic P.; Prentice, Andrew M.; Byrd, Kendra A.; Ndjebayi, Alex; Stewart, Christine P.; Engle-Stone, Reina; Green, Tim J.; Karakochuk, Crystal D.; Suchdev, Parminder S.; Bejon, Philip; Duffy, Patrick E.; Davey Smith, George; Elliott, Alison M.; Williams, Thomas N.; Atkinson, Sarah H. Share Save
Resistance to pirimiphos-methyl in West African Anopheles is spreading via duplication and introgression of the Ace1 locus Grau-Bove, Xavier; Lucas, Eric; Pipini, Dimitra; Rippon, Emily; van 't Hof, Arjen E.; Constant, Edi; Dadzie, Samuel; Egyir-Yawson, Alexander; Essandoh, John; Chabi, Joseph; Djogbenou, Luc; Harding, Nicholas J.; Miles, Alistair; Kwiatkowski, Dominic; Donnelly, Martin J.; Weetman, David Share Save
Investigating the drivers of the spatio-temporal patterns of genetic differences between Plasmodium falciparum malaria infections in Kilifi County, Kenya (vol 9, pg 19018, 2019) Malinga, Josephine; Mogeni, Polycarp; Omedo, Irene; Rockett, Kirk; Hubbart, Christina; Jeffreys, Anne; Williams, Thomas N.; Kwiatkowski, Dominic; Bejon, Philip; Ross, Amanda Share Save
Multi-locus genotyping reveals established endemicity of a geographically distinct Plasmodium vivax population in Mauritania, West Africa Ba, Hampate; Auburn, Sarah; Jacob, Christopher G.; Goncalves, Sonia; Duffy, Craig W.; Stewart, Lindsay B.; Price, Ric N.; Deh, Yacine Boubou; Diallo, Mamadou Yero; Tandia, Abderahmane; Kwiatkowski, Dominic P.; Conway, David J. Share Save
Emergence of artemisinin-resistant Plasmodium falciparum with kelch13 C580Y mutations on the island of New Guinea Miotto, Olivo; Sekihara, Makoto; Tachibana, Shin-Ichiro; Yamauchi, Masato; Pearson, Richard D.; Amato, Roberto; Goncalves, Sonia; Mehra, Somya; Noviyanti, Rintis; Marfurt, Jutta; Auburn, Sarah; Price, Ric N.; Mueller, Ivo; Ikeda, Mie; Mori, Toshiyuki; Hirai, Makoto; Tavul, Livingstone; Hetzel, Manuel W.; Laman, Moses; Barry, Alyssa E.; Ringwald, Pascal; Ohashi, Jun; Hombhanje, Francis; Kwiatkowski, Dominic P.; Mita, Toshihiro Share Save
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