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Shankar Srinivas

university of oxford

33H-index
104Paper Count
8.9KCitation Count
Published Papers 39
Publication Date
Protocol Protocol for lattice light-sheet time-lapse imaging of early post-implantation mouse embryos
err2025-12-01
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errOAAI
errThowfeequ, Shifaan; Coker, Helena; Fritzsche, Marco; Srinivas, Shankar
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Calcium signaling is required for anterior patterning in the mouse embryo
err2025-10-01
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PREAI
errStower, Matthew J.; Tyser, Richard C. V.; Thowfeequ, Shifaan; Zhou, Felix; Portela, Marta; Miti, Konstantinos; Sugnaseelan, Jacintha; Lu, Xin; Srinivas, Shankar
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Origin, fate and function of extraembryonic tissues during mammalian development
err2024-12-03
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PREAI
errThowfeequ, Shifaan; Hanna, Courtney W.; Srinivas, Shankar
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An integrated approach identifies the molecular underpinnings of murine anterior visceral endoderm migration
err2024-09-01
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errOAAI
errThowfeequ, Shifaan; Fiorentino, Jonathan; Hu, Di; Solovey, Maria; Ruane, Sharon; Whitehead, Maria; Zhou, Felix; Godwin, Jonathan; Mateo-Otero, Yentel; Vanhaesebroeck, Bart; Scialdone, Antonio; Srinivas, Shankar
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CIARA: a cluster-independent algorithm for identifying markers of rare cell types from single-cell sequencing data
err2023-06-08
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PREAI
errLubatti, Gabriele; Stock, Marco; Iturbide, Ane; Segura, Mayra L. Ruiz Tejada; Riepl, Melina; Tyser, Richard C. V.; Danese, Anna; Colome-Tatche, Maria; Theis, Fabian J.; Srinivas, Shankar; Torres-Padilla, Maria-Elena; Scialdone, Antonio
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Dynamic enlargement and mobilization of lipid droplets in pluripotent cells coordinate morphogenesis during mouse peri-implantation development
err2022-07-05
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errOAAI
errMau, King Hang Tommy; Karimlou, Donja; Barneda, David; Brochard, Vincent; Royer, Christophe; Leeke, Bryony; de Souza, Roshni A.; Pailles, Melanie; Percharde, Michelle; Srinivas, Shankar; Jouneau, Alice; Christian, Mark; Azuara, Veronique
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ASPP2 maintains the integrity of mechanically stressed pseudostratified epithelia during morphogenesis
err2022-02-17
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errOAAI
errRoyer, Christophe; Sandham, Elizabeth; Slee, Elizabeth; Schneider, Falk; Lagerholm, Christoffer B.; Godwin, Jonathan; Veits, Nisha; Hathrell, Holly; Zhou, Felix; Leonavicius, Karolis; Garratt, Jemma; Narendra, Tanaya; Vincent, Anna; Jones, Celine; Child, Tim; Coward, Kevin; Graham, Chris; Fritzsche, Marco; Lu, Xin; Srinivas, Shankar
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Epithelial dynamics during early mouse development
err2022-02-01
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errOAAI
errThowfeequ, Shifaan; Stower, Matthew J.; Srinivas, Shankar
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Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis
err2021-09-06
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errOAAI
errLohoff, T.; Ghazanfar, S.; Missarova, A.; Koulena, N.; Pierson, N.; Griffiths, J. A.; Bardot, E. S.; Eng, C. -H. L.; Tyser, R. C. V.; Argelaguet, R.; Guibentif, C.; Srinivas, S.; Briscoe, J.; Simons, B. D.; Hadjantonakis, A. -K.; Gottgens, B.; Reik, W.; Nichols, J.; Cai, L.; Marioni, J. C.
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Cell competition acts as a purifying selection to eliminate cells with mitochondrial defects during early mouse development
err2021-07-12
err32
errOAAI
errLima, Ana; Lubatti, Gabriele; Burgstaller, Joerg; Hu, Di; Green, Alistair P.; Di Gregorio, Aida; Zawadzki, Tamzin; Pernaute, Barbara; Mahammadov, Elmir; Perez-Montero, Salvador; Dore, Marian; Sanchez, Juan Miguel; Bowling, Sarah; Sancho, Margarida; Kolbe, Thomas; Karimi, Mohammad; Carling, David; Jones, Nick; Srinivas, Shankar; Scialdone, Antonio; Rodriguez, Tristan A.
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Asymmetry in the frequency and position of mitosis in the mouse embryo epiblast at gastrulation
err2020-10-05
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errOAAI
errMathiah, Navrita; Despin-Guitard, Evangeline; Stower, Matthew; Nahaboo, Wallis; Eski, Elif Sema; Singh, Sumeet Pal; Srinivas, Shankar; Migeotte, Isabelle
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Spatial protein analysis in developing tissues: a sampling-based image processing approach
err2020-08-24
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errOAAI
errLeonavicius, Karolis; Royer, Christophe; Miranda, Antonio M. A.; Tyser, Richard C., V; Kip, Annemarie; Srinivas, Shankar
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Establishment of a relationship between blastomere geometry and YAP localisation during compaction
err2020-01-01
err13
errOAAI
errRoyer, Christophe; Leonavicius, Karolis; Kip, Annemarie; Fortin, Deborah; Nandi, Kirtirupa; Vincent, Anna; Jones, Celine; Child, Tim; Coward, Kevin; Graham, Chris; Srinivas, Shankar
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Hippo Enters the Competition
err2019-07-01
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errOAAI
errRoyer, Christophe; Srinivas, Shankar
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Mechanics of mouse blastocyst hatching revealed by a hydrogel-based microdeformation assay
err2018-09-19
err64
errOAAI
errLeonavicius, Karolis; Royer, Christophe; Preece, Chris; Davies, Benjamin; Biggins, John S.; Srinivas, Shankar
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