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A human pan-disease blood atlas of the circulating proteome Alvez, Maria Bueno; Bergstrom, Sofia; Kenrick, Josefin; Johansson, Emil; Aberg, Mikael; Akyildiz, Murat; Altay, Ozlem; Skold, Hilda; Antonopoulos, Konstantinos; Apostolakis, Emmanouil; Balcioglu, Yasin Hasan; Bergstrom, Anna; Bergstrom, Goran; Bjorkander, Sophia; Brage, Suzanne Egyhazi; Brodin, Petter; Butler, Lynn; Cajander, Sara; Danielsson, Hanna; Dayangac, Murat; Dinler-Doganay, Gizem; Doganay, Levent; Enblad, Gunilla; Enblad, Malin; Fagerberg, Linn; Falck-Jones, Sara; Farnert, Anna; Forsberg, Mattias; Gonzalez, Laura; Gummesson, Anders; Gunnarsson, Karin; Gunnarsson, Iva; Gyllensten, Ulf; Hesselager, Goran; Hober, Andreas; Hoglund, Martin; Holmqvist, Marie; Horuluoglu, Begum; Hultgren, Rebecka; Iglesias, Maria Jesus; Janols, Helena; Johansson, Fredric; Johnsson, Anette; Klareskog, Lars; Kotol, David; Kull, Inger; Kvarnstrom, Marika; Lautenbach, Maximilian Julius; Liljedahl, Ulrika; Lindman, Henrik; Lindskog, Cecilia; Lipcsey, Miklos; Lundberg, Ingrid E.; Mardinoglu, Adil; Melen, Erik; Meng, Lingqi; Merritt, Anne-Sophie; Mulder, Jan; Nguyen, Mai Thi-Huyen; Nordlund, Jessica; Norrby-Teglund, Anna; Notarnicola, Antonella; Nowak, Piotr; Odeberg, Jacob; Oksvold, Per; Olsson, Tomas; Padyukov, Leonid; Pauksens, Karlis; Piehl, Fredrik; Pin, Elisa; Ponten, Fredrik; Rameika, Natallia; Reepalu, Anton; Roy, Joy; Schwenk, Jochen M.; Sen, Meltem; Siika, Antti; Simonson, Oscar E.; Sivertsson, Asa; Sjoblom, Tobias; Sjostedt, Evelina; Skoglund, Lovisa; Smed-Sorensen, Anna; Sonden, Klara; Sonnerborg, Anders; Stalberg, Karin; Stralin, Kristoffer; Sunden-Cullberg, Jonas; Sundling, Christopher; Sutantiwanichkul, Thanadol; Svedman, Fernanda Costa; Svensson, Mattias; Svenungsson, Elisabet; Lakshmikanth, Tadepally; Tran-Minh, Khue Hua; Turkez, Hasan; Unge, Christian; Venge, Per; Wahren-Herlenius, Marie; Woessmann, Jakob; Yang, Hong; Yesilkaya, Umit Haluk; Yuan, Meng; Zeybel, Mujdat; Zhang, Cheng; Zhong, Wen; Zwahlen, Martin; Von Feilitzen, Kalle; Nilsson, Peter; Edfors, Fredrik; Uhlen, Mathias Share Save
FGFR2 splice variant as a cell fate adjudicator determines clinical outcomes in non-small cell lung cancer Yu, Hui; Horie, Masafumi; Lindberg, Amanda; Backman, Max; Hekmati, Neda; Mattsson, Johanna; Miyashita, Naoya; Brunnstrom, Hans; Ponten, Fredrik; Saito, Akira; Strell, Carina; Micke, Patrick Share Save
identification of spatially enriched cancer cell- and immune cell-regulatory multi-marker-defined prognostic cancer associated fibroblast subsets of human colon cancer Huang, Linglong; Herrera, Mercedes; Sjolund, Jonas; Chocoloff, Vladimir; Joost, Simon; Tabiev, Rasul M.; Leiss, Lina Wik; Strell, Carina; Nunes, Luis; Mezheyeuski, Artur; Edler, David; Martling, Anna; Ponten, Fredrik; Glimelius, Bengt; Sjoblom, Tobias; Kasper, Maria; Pietras, Kristian; Ostman, Arne Share Save
CD93 maintains endothelial barrier function and limits metastatic dissemination Vemuri, Kalyani; Pereira, Beatriz de Alves; Fuenzalida, Patricia; Subashi, Yelin; Barbera, Stefano; van Hooren, Luuk; Hedlund, Marie; Ponten, Fredrik; Lindskog, Cecilia; Olsson, Anna-Karin; Lugano, Roberta; Dimberg, Anna Share Save
Transcriptome Analysis Reveals Distinct Patterns Between the Invasive and Noninvasive Pituitary Neuroendocrine Tumors Jotanovic, Jelena; Tebani, Abdellah; Hekmati, Neda; Sivertsson, Asa; Lindskog, Cecilia; Uhlen, Mathias; Gudjonsson, Olafur; Tsatsaris, Erika; Engstrom, Britt Eden; Wikstrom, Johan; Ponten, Fredrik; Casar-Borota, Olivera Share Save
Effect of preoperative chemotherapy on the histopathological classification of gastric cancer Caspers, I. A.; Biesma, H. D.; Wiklund, K.; Ponten, F.; Lind, P.; Nordsmark, M.; Sikorska, K.; Meershoek-KleinKranenbarg, E.; Hartgrink, H. H.; van de Velde, C. J. H.; van Sandick, J. W.; Verheij, M.; Cats, A.; van Grieken, N. C. T. Share Save
Neoantigen heterogeneity among subtypes in colorectal cancer Li, F.; Luo, T.; Nunes, L.; Wu, M.; Hammarstrom, K.; Lundin, E.; Ljuslinder, I.; Mezheyeuski, A.; Edqvist, P-H.; Lofgren-Burstrom, A.; Zingmark, C.; Edin, S.; Ponten, F.; Palmqvist, R.; Wu, K.; Glimelius, B.; Sjoblom, T.; Lin, C. Share Save
Subclasses of microsatellite-instability colorectal cancer with unique molecular features and immune cell infiltration patterns Wu, K.; Wu, M.; Luo, T.; Li, F.; Nunes, L.; Hammarstrom, K.; Lundin, E.; Ljuslinder, I.; Mezheyeuski, A.; Edqvist, P-H.; Lofgren-Burstrom, A.; Zingmark, C.; Edin, S.; Ponten, F.; Palmqvist, R.; Lin, C.; Glimelius, B.; Sjoblom, T. Share Save
Next generation pan-cancer blood proteome profiling using proximity extension assay Alvez, Maria Bueno; Edfors, Fredrik; von Feilitzen, Kalle; Zwahlen, Martin; Mardinoglu, Adil; Edqvist, Per-Henrik; Sjoblom, Tobias; Lundin, Emma; Rameika, Natallia; Enblad, Gunilla; Lindman, Henrik; Hoglund, Martin; Hesselager, Goran; Stalberg, Karin; Enblad, Malin; Simonson, Oscar E.; Haggman, Michael; Axelsson, Tomas; Aberg, Mikael; Nordlund, Jessica; Zhong, Wen; Karlsson, Max; Gyllensten, Ulf; Ponten, Fredrik; Fagerberg, Linn; Uhlen, Mathias Share Save
Spatial immunophenotyping of the tumour microenvironment in non-small cell lung cancer Backman, Max; Strell, Carina; Lindberg, Amanda; Mattsson, Johanna S. M.; Elfving, Hedvig; Brunnstrom, Hans; O'Reilly, Aine; Bosic, Martina; Gulyas, Miklos; Isaksson, Johan; Botling, Johan; Karre, Klas; Jirstrom, Karin; Lamberg, Kristina; Ponten, Fredrik; Leandersson, Karin; Mezheyeuski, Artur; Micke, Patrick Share Save
An immune score reflecting pro- and anti-tumoural balance of tumour microenvironment has major prognostic impact and predicts immunotherapy response in solid cancers Mezheyeuski, Artur; Backman, Max; Mattsson, Johanna; Martin-Bernabe, Alfonso; Larsson, Chatarina; Hrynchyk, Ina; Hammarstrom, Klara; Strom, Simon; Ekstrom, Joakim; Mauchanski, Siarhei; Khelashvili, Salome; Lindberg, Amanda; Agnarsdottir, Margret; Edqvist, Per-Henrik; Huvila, Jutta; Segersten, Ulrika; Malmstrom, Per-Uno; Botling, Johan; Nodin, Bjoern; Hedner, Charlotta; Borg, David; Brandstedt, Jenny; Sartor, Hanna; Leandersson, Karin; Glimelius, Bengt; Portyanko, Anna; Ponten, Fredrik; Jirstrom, Karin; Micke, Patrick; Sjoblom, Tobias Share Save
Endothelial cell heterogeneity and microglia regulons revealed by a pig cell landscape at single-cell level (vol 13, 3620, 2022) Wang, Fei; Ding, Peiwen; Liang, Xue; Ding, Xiangning; Brandt, Camilla Blunk; Sjostedt, Evelina; Zhu, Jiacheng; Bolund, Saga; Zhang, Lijing; de Rooij, Laura P. M. H.; Luo, Lihua; Wei, Yanan; Zhao, Wandong; Lv, Zhiyuan; Hasko, Janos; Li, Runchu; Qin, Qiuyu; Jia, Yi; Wu, Wendi; Yuan, Yuting; Pu, Mingyi; Wang, Haoyu; Wu, Aiping; Xie, Lin; Liu, Ping; Chen, Fang; Herold, Jacqueline; Kalucka, Joanna; Karlsson, Max; Zhang, Xiuqing; Helmig, Rikke Bek; Fagerberg, Linn; Lindskog, Cecilia; Ponten, Fredrik; Uhlen, Mathias; Bolund, Lars; Jessen, Niels; Jiang, Hui; Xu, Xun; Yang, Huanming; Carmeliet, Peter; Mulder, Jan; Chen, Dongsheng; Lin, Lin; Luo, Yonglun Share Save
A human adipose tissue cell-type transcriptome atlas Norreen-Thorsen, Marthe; Struck, Eike Christopher; Oling, Sofia; Zwahlen, Martin; Von Feilitzen, Kalle; Odeberg, Jacob; Lindskog, Cecilia; Ponten, Fredrik; Uhlen, Mathias; Dusart, Philip James; Butler, Lynn Marie Share Save
Endothelial cell heterogeneity and microglia regulons revealed by a pig cell landscape at single-cell level Wang, Fei; Ding, Peiwen; Liang, Xue; Ding, Xiangning; Brandt, Camilla Blunk; Sjostedt, Evelina; Zhu, Jiacheng; Bolund, Saga; Zhang, Lijing; de Rooij, Laura P. M. H.; Luo, Lihua; Wei, Yanan; Zhao, Wandong; Lv, Zhiyuan; Hasko, Janos; Li, Runchu; Qin, Qiuyu; Jia, Yi; Wu, Wendi; Yuan, Yuting; Pu, Mingyi; Wang, Haoyu; Wu, Aiping; Xie, Lin; Liu, Ping; Chen, Fang; Herold, Jacqueline; Kalucka, Joanna; Karlsson, Max; Zhang, Xiuqing; Helmig, Rikke Bek; Fagerberg, Linn; Lindskog, Cecilia; Ponten, Fredrik; Uhlen, Mathias; Bolund, Lars; Jessen, Niels; Jiang, Hui; Xu, Xun; Yang, Huanming; Carmeliet, Peter; Mulder, Jan; Chen, Dongsheng; Lin, Lin; Luo, Yonglun Share Save
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Annotation of pituitary neuroendocrine tumors with genome-wide expression analysis Tebani, Abdellah; Jotanovic, Jelena; Hekmati, Neda; Sivertsson, Asa; Gudjonsson, Olafur; Engstrom, Britt Eden; Wikstrom, Johan; Uhlen, Mathias; Casar-Borota, Olivera; Ponten, Fredrik Share Save
Infiltration of NK and plasma cells is associated with a distinct immune subset in non-small cell lung cancer Backman, Max; La Fleur, Linnea; Kurppa, Pinja; Djureinovic, Dijana; Elfving, Hedvig; Brunnstrom, Hans; Mattsson, Johanna Sofia Margareta; Lindberg, Amanda; Ponten, Victor; Eltahir, Mohamed; Mangsbo, Sara; Gulyas, Miklos; Isaksson, Johan; Jirstrom, Karin; Karre, Klas; Leandersson, Karin; Mezheyeuski, Artur; Ponten, Fredrik; Strell, Carina; Lindskog, Cecilia; Botling, Johan; Micke, Patrick Share Save
ELTD1 deletion reduces vascular abnormality and improves T-cell recruitment after PD-1 blockade in glioma Huang, Hua; Georganaki, Maria; Conze, Lei Liu; Lavina, Barbara; van Hooren, Luuk; Vemuri, Kalyani; van de Walle, Tiarne; Ramachandran, Mohanraj; Zhang, Lei; Ponten, Fredrik; Bergqvist, Michael; Smits, Anja; Betsholtz, Christer; Dejana, Elisabetta; Magnusson, Peetra U.; He, Liqun; Lugano, Roberta; Dimberg, Anna Share Save
A single-cell type transcriptomics map of human tissues Karlsson, Max; Zhang, Cheng; Mear, Loren; Zhong, Wen; Digre, Andreas; Katona, Borbala; Sjoestedt, Evelina; Butler, Lynn; Odeberg, Jacob; Dusart, Philip; Edfors, Fredrik; Oksvold, Per; von Feilitzen, Kalle; Zwahlen, Martin; Arif, Muhammad; Altay, Ozlem; Li, Xiangyu; Ozcan, Mehmet; Mardonoglu, Adil; Fagerberg, Linn; Mulder, Jan; Luo, Yonglun; Ponten, Fredrik; Uhlen, Mathias; Lindskog, Cecilia Share Save
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