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Andrea Sottoriva

computational biology research centre

46H-index
420Paper Count
1.3WCitation Count
Published Papers 76
Publication Date
A guide to understanding tumour evolution through the lens of population genetics
err2026-09-09
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PREAI
errGiulio Caravagna; Trevor A. Graham; Andrea Sottoriva
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Gene mutant dosage is associated with prognosis and metastatic tropism in 60,000 clinical cancer samples
err2026-07-31
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errOAAI
errNicola Calonaci; Eriseld Krasniqi; Daniel Colic; Stefano Scalera; Giorgia Gandolfi; Salvatore Milite; Konstantin Bräutigam; Andrea Sottoriva; Trevor A. Graham; Leonardo Egidi; Biagio Ricciuti; Marcello Maugeri-Saccà; Giulio Caravagna
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Interpretable learning of temporal cellular dynamics from single-cell data
err2026-03-23
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errOAAI
errBoudjelthia, Idris Kouadri; Milite, Salvatore; El Kazwini, Nour; Huang, Yuanhua; Sottoriva, Andrea; Sanguinetti, Guido
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Epigenetically driven and early immune evasion in colorectal cancer evolution
err2025-11-05
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errOAAI
errEszter Lakatos; Vinaya Gunasri; Luis Zapata; Jacob Househam; Timon Heide; Nicholas Trahearn; Ottilie Swinyard; Luis Cisneros; Claire Lynn; Maximilian Mossner; Chris Kimberley; Inmaculada Spiteri; George D. Cresswell; Gerard Llibre-Palomar; Miriam Mitchison; Carlo C. Maley; Marnix Jansen; Manuel Rodriguez-Justo; John Bridgewater; Ann-Marie Baker; Andrea Sottoriva; Trevor A. Graham
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Heterogeneity and evolution of DNA mutation rates in microsatellite stable colorectal cancer
err2025-05-21
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PREAI
errGrassi, Elena; Vurchio, Valentina; Cresswell, George D.; Catalano, Irene; Lupo, Barbara; Sassi, Francesco; Galimi, Francesco; Borgato, Sofia; Ferri, Martina; Viviani, Marco; Pompei, Simone; Urgese, Gianvito; Chen, Bingjie; Zanella, Eugenia R.; Cottino, Francesca; Russo, Mariangela; Mauri, Gianluca; Pietrantonio, Filippo; Zampino, Maria Giulia; Lazzari, Luca; Marsoni, Silvia; Bardelli, Alberto; Lagomarsino, Marco Cosentino; Sottoriva, Andrea; Trusolino, Livio
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The Stratified Medicine Paediatrics programme for cancers of childhood: Cell free DNA and serial tumour sequencing identifies subtype specific evolution and epigenetic states
err2024-09-05
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PREAI
errGeorge, Sally L.; Lynn, Claire; Stankunaite, Reda; Hughes, Debbie; Chalker, Jane; Ahmed, Saira Waqar; Oostveen, Minou; Proszek, Paula; Yuan, Lina; Shaikh, Ridwan; Jamal, Sabri; Tall, Jennifer; Shipley, Janet; Tweddle, Deborah; Marshall, Lynley; Jones, Chris; Gatz, Susanne; Vedi, Aditi; Angelini, Paola; Anderson, John; Cresswell, George; Graham, Trevor A.; Al-Lazikani, Bissan; Kearns, Pamela; Hutchinson, J. Ciaran; Hargrave, Darren; Jacques, Thomas; Hubank, Michael; Sottoriva, Andrea; Chesler, Louis
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Tumor evolution metrics predict recurrence beyond 10 years in locally advanced prostate cancer
err2024-07-12
err1
errOAAI
errFernandez-Mateos, Javier; Cresswell, George D.; Trahearn, Nicholas; Webb, Katharine; Sakr, Chirine; Lampis, Andrea; Stuttle, Christine; Corbishley, Catherine M.; Stavrinides, Vasilis; Zapata, Luis; Spiteri, Inmaculada; Heide, Timon; Gallagher, Lewis; James, Chela; Ramazzotti, Daniele; Gao, Annie; Kote-Jarai, Zsofia; Acar, Ahmet; Truelove, Lesley; Proszek, Paula; Murray, Julia; Reid, Alison; Wilkins, Anna; Hubank, Michael; Eeles, Ros; Dearnaley, David; Sottoriva, Andrea
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Homopolymer switches mediate adaptive mutability in mismatch repair-deficient colorectal cancer
err2024-07-03
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errOAAI
errKayhanian, Hamzeh; Cross, William; van der Horst, Suzanne E. M.; Barmpoutis, Panagiotis; Lakatos, Eszter; Caravagna, Giulio; Zapata, Luis; Van Hoeck, Arne; Middelkamp, Sjors; Litchfield, Kevin; Steele, Christopher; Waddingham, William; Patel, Dominic; Milite, Salvatore; Jin, Chen; Baker, Ann-Marie; Alexander, Daniel C.; Khan, Khurum; Hochhauser, Daniel; Novelli, Marco; Werner, Benjamin; van Boxtel, Ruben; Hageman, Joris H.; Buissant des Amorie, Julian R.; Linares, Josep; Ligtenberg, Marjolijn J. L.; Nagtegaal, Iris D.; Lacle, Miangela M.; Moons, Leon M. G.; Brosens, Lodewijk A. A.; Pillay, Nischalan; Sottoriva, Andrea; Graham, Trevor A.; Rodriguez-Justo, Manuel; Shiu, Kai-Keen; Snippert, Hugo J. G.; Jansen, Marnix
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Immune evasion impacts the landscape of driver genes during cancer evolution
err2024-06-26
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errOAAI
errGourmet, Lucie; Sottoriva, Andrea; Walker-Samuel, Simon; Secrier, Maria; Zapata, Luis
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Phenotypic noise and plasticity in cancer evolution
err2024-06-01
err3
errOAAI
errWhiting, Frederick J. H.; Househam, Jacob; Baker, Ann-Marie; Sottoriva, Andrea; Graham, Trevor A.
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Determinants of tumour-immune evolutionary trajectory in colorectal cancer
err2024-06-01
err0
PREAI
errLakatos, E.; Gunasri, V.; Zapata, L.; Househam, J.; Heide, T.; Trahearn, N.; Swinyard, O.; Lynn, C.; Cresswell, G.; Mossner, M.; Kimberley, C.; Spiteri, I.; Jansen, M.; Rodriguez-Justo, M.; Bridgewater, J. A.; Baker, A-M.; Sottoriva, A.; Graham, T.
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Long-term Multimodal Recording Reveals Epigenetic Adaptation Routes in Dormant Breast Cancer Cells
err2024-03-26
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errOAAI
errRosano, Dalia; Sofyali, Emre; Dhiman, Heena; Ghirardi, Chiara; Ivanoiu, Diana; Heide, Timon; Vingiani, Andrea; Bertolotti, Alessia; Pruneri, Giancarlo; Canale, Eleonora; Dewhurst, Hannah F.; Saha, Debjani; Slaven, Neil; Barozzi, Iros; Li, Tong; Zemlyanskiy, Grigory; Phillips, Henry; James, Chela; Gyorffy, Balazs; Lynn, Claire; Cresswell, George D.; Rehman, Farah; Noberini, Roberta; Bonaldi, Tiziana; Sottoriva, Andrea; Magnani, Luca
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Cancer Evolution: A Multifaceted Affair
err2023-12-06
err10
errOAAI
errCiriello, Giovanni; Magnani, Luca; Aitken, Sarah J.; Akkari, Leila; Behjati, Sam; Hanahan, Douglas; Landau, Dan A.; Lopez-Bigas, Nuria; Lupianez, Dario G.; Marine, Jean-Christophe; Martin-Villalba, Ana; Natoli, Gioacchino; Obenauf, Anna C.; Oricchio, Elisa; Scaffidi, Paola; Sottoriva, Andrea; Swarbrick, Alexander; Tonon, Giovanni; Vanharanta, Sakari; Zuber, Johannes
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Contribution of pks+E. coli mutations to colorectal carcinogenesis
err2023-11-29
err19
errOAAI
errChen, Bingjie; Ramazzotti, Daniele; Heide, Timon; Spiteri, Inmaculada; Fernandez-Mateos, Javier; James, Chela; Magnani, Luca; Graham, Trevor A.; Sottoriva, Andrea
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INVESTIGATING THE MORPHOLOGICAL HETEROGENEITY OF GLIOBLASTOMA STEM CELLS AND ITS ROLE IN TUMOUR PROLIFERATION AND INVASIVENESS
err2023-09-08
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PREAI
errBarelli, C.; Don, F. Kaluthantrige; Bertani, I.; Villa, G.; Osei, I.; Iannuzzi, R.; Vinceti, A.; Brognaro, E.; Sottoriva, A.; Iorio, F.; Kalebic, N.
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Immune selection determines tumor antigenicity and influences response to checkpoint inhibitors
err2023-03-09
err22
errOAAI
errZapata, Luis; Caravagna, Giulio; Williams, Marc J.; Lakatos, Eszter; AbdulJabbar, Khalid; Werner, Benjamin; Chowell, Diego; James, Chela; Gourmet, Lucie; Milite, Salvatore; Acar, Ahmet; Riaz, Nadeem; Chan, Timothy A. A.; Graham, Trevor A.; Sottoriva, Andrea
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Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
err2022-08-01
err10
errOAAI
errTari, Haider; Kessler, Ketty; Trahearn, Nick; Werner, Benjamin; Vinci, Maria; Jones, Chris; Sottoriva, Andrea
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Multiple roles for plasticity in metastasis and therapy resistance in long-term survivors of metastatic colorectal cancer
err2022-05-15
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PREAI
errBerner, Alison May; Gabbutt, Calum; Nowinski, Salpie; Househam, Jacob; Trahearn, Nick; Cresswell, George D.; Nadhamuni, Vinaya Srirangam; Kimberley, Christopher; Fassan, Matteo; Baker, Ann-Marie; Sottoriva, Andrea; Thirlwell, Christina; Bridgewater, John; Graham, Trevor
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Germline MBD4 deficiency causes a multi-tumor predisposition syndrome
err2022-05-01
err29
errOAAI
errPalles, Claire; West, Hannah D.; Chew, Edward; Galavotti, Sara; Flensburg, Christoffer; Grolleman, Judith E.; Jansen, Erik A. M.; Curley, Helen; Chegwidden, Laura; Arbe-Barnes, Edward H.; Lander, Nicola; Truscott, Rebekah; Pagan, Judith; Bajel, Ashish; Sherwood, Kitty; Martin, Lynn; Thomas, Huw; Georgiou, Demetra; Fostira, Florentia; Goldberg, Yael; Adams, David J.; van der Biezen, Simone A. M.; Christie, Michael; Clendenning, Mark; Thomas, Laura E.; Deltas, Constantinos; Dimovski, Aleksandar J.; Dymerska, Dagmara; Lubinski, Jan; Mahmood, Khalid; van der Post, Rachel S.; Sanders, Mathijs; Weitz, Jurgen; Taylor, Jenny C.; Turnbull, Clare; Vreede, Lilian; van Wezel, Tom; Whalley, Celina; Arnedo-Pac, Claudia; Caravagna, Giulio; Cross, William; Chubb, Daniel; Frangou, Anna; Gruber, Andreas J.; Kinnersley, Ben; Noyvert, Boris; Church, David; Graham, Trevor; Houlston, Richard; Lopez-Bigas, Nuria; Sottoriva, Andrea; Wedge, David; Jenkins, Mark A.; Kuiper, Roland P.; Roberts, Andrew W.; Cheadle, Jeremy P.; Ligtenberg, Marjolijn J. L.; Hoogerbrugge, Nicoline; Koelzer, Viktor H.; Rivas, Andres Dacal; Winship, Ingrid M.; Ponte, Clara Ruiz; Buchanan, Daniel D.; Power, Derek G.; Green, Andrew; Tomlinson, Ian P. M.; Sampson, Julian R.; Majewski, Ian J.; de Voer, Richarda M.
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