Andrea Califano - Publications, H-index & Citations

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Andrea Califano

columbia university

96H-index

1.1KPaper Count

5.4WCitation Count

Published Papers 232

Publication Date

Organ-specific colonization and niche remodeling in a human tissue model of metastasis

Science Translational Medicine

IF14.6

2026-08-19

PREAI

Alan G. Chramiec; Ilaria Baldassarri; Ece Öztürk; Daniel Naveed Tavakol; Miranda C. Wang; Max Summers; Keith Yeager; Richard Z. Zhuang; Anushka Srivastava; Somnath Tagore; Diogo Teles; Hanina Hibshoosh; Andrea Califano; Peter A. Sims; Gordana Vunjak-Novakovic

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Fifteen challenges for generative AI applications to cell biology

Cell

IF42.5

2026-08-17

OAAI

Leo Dupire; Aly A. Khan; Theofanis Karaletsos; Shana Kelley; Emma Lundberg; Jian Ma; Evan Paull; Stephen R. Quake; Raul Rabadan; Cassius Rowan; Peter Sims; Sohail Tavazoie; John S. Tsang; Mingxuan Zhang; Andrea Califano

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A compendium of next-generation patient-derived models for diverse cancers

Nature

IF48.5

2026-08-05

OAAI

Dina ElHarouni; Mushriq Al-Jazrawe; Seongmin Choi; Merve Dede; Toshinori Hinoue; Sean A. Misek; Heeju Noh; Luca Zanella; Yuen-Yi Tseng; Hayley E. Francies; Dennis Plenker; Cindy W. Kyi; Julyann Perez-Mayoral; Megan J. Stine; Eva Tonsing-Carter; Rachana Agarwal; Jean Claude Zenklusen; James M. Clinton; Jennifer M. Shelton; Timothy R. Chu; William F. Hooper; Xavi Loinaz; Paula Keskula; Jordan Tagle; Peyton C. Kuhlers; Bahar Tercan; Sylvia F. Boj; Alessandro Vasciaveo; Lorenzo Tomassoni; James M. Crawford; Shawna Walsh; Claire Sinai; Sonam Bhatia; Priya Sridevi; Hardik Patel; Maria Antonietta Cerone; Kyle Ellrott; Calvin J. Kuo; Olivier Elemento; Semir Beyaz; Vincenzo Corbo; David L. Spector; Rameen Beroukhim; Martin L. Ferguson; Andrew D. Cherniack; Peter W. Laird; Nicolas Robine; Andrew McPherson; Katherine A. Hoadley; Mathew J. Garnett; David A. Tuveson; Andrea Califano; Paul T. Spellman; Keith L. Ligon; Daniela S. Gerhard; Louis M. Staudt; Jesse S. Boehm

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Complex assembly and activity states as multifaceted protein attributes explaining phenotypic variability

Molecular Systems Biology

IF7.7

2026-07-22

OAAI

George Rosenberger; Peng Xue; Isabell Bludau; Claudia Martelli; Evan Williams; Ben C Collins; Andrea Califano; Yansheng Liu; Ruedi Aebersold

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Systematic design of combination therapy by targeting master regulators of coexisting diffuse midline glioma cell states

Nature Genetics

IF29

2026-04-22

OAAI

Ester Calvo Fernández; Lorenzo Tomassoni; Xu Zhang; Junqiang Wang; Aleksandar Obradovic; Pasquale Laise; Aaron T. Griffin; Lukas Vlahos; Hanna E. Minns; Diana V. Morales; Christian Simmons; Matthew Gallitto; Hong-Jian Wei; Timothy J. Martins; Pamela S. Becker; John R. Crawford; Theophilos Tzaridis; Robert J. Wechsler-Reya; James Garvin; Robyn D. Gartrell; Luca Szalontay; Stergios Zacharoulis; Cheng-Chia Wu; Zhiguo Zhang; Andrea Califano; Jovana Pavisic

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Exon inclusion signatures enable accurate estimation of splicing factor activity

Nature Communications

IF15.7

2026-03-12

OAAI

Miquel Anglada-Girotto; Carolina Segura-Morales; Daniel F. Moakley; Chaolin Zhang; Samuel Miravet-Verde; Andrea Califano; Luis Serrano

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Pan-cancer inference and validation of hypermorphic, hypomorphic and neomorphic mutations

Nature Genetics

IF29

2026-02-11

PREAI

Somnath Tagore; Samuel Tsang; Carla Tangermann; Lucas ZhongMing Hu; Sven Diederichs; Gordon B. Mills; Andrea Califano

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NSD2 targeting reverses plasticity and drug resistance in prostate cancer

Nature

IF48.5

2025-11-26

OAAI

Jia J. Li; Alessandro Vasciaveo; Dimitris Karagiannis; Zhen Sun; Kristjan H. Gretarsson; Xiao Chen; Ouathek Ouerfelli; Fabio Socciarelli; Ziv Frankenstein; Hanyang Dong; Min Zou; Wei Yuan; Guangli Yang; Gabriel M. Aizenman; Tania Pannellini; Xinjing Xu; Himisha Beltran; Yu Chen; Kevin Gardner; Brian D. Robinson; Johann de Bono; Or Gozani; Cory Abate-Shen; Mark A. Rubin; Massimo Loda; Charles L. Sawyers; Andrea Califano; Chao Lu; Michael M. Shen

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Morphogenesis and regeneration share a conserved core transition cell state program that controls lung epithelial cell fate

Developmental Cell

IF8.7

2025-09-05

PREAI

Xiangyi Ke; Benjamin van Soldt; Lukas Vlahos; Yizhuo Zhou; Jun Qian; Pasquale Laise; Joel George; Claudia Capdevila; Ian Glass; Kelley Yan; Andrea Califano; Wellington V. Cardoso

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The regulatory architecture of the primed pluripotent cell state

NATURE COMMUNICATIONS

IF15.7

2025-04-09

OAAI

Li, Bo I.; Alvarez, Mariano J.; Zhao, Hui; Chirathivat, Napon; Califano, Andrea

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Targeted delivery of napabucasin with radiotherapy improves outcomes in diffuse midline glioma

NEURO-ONCOLOGY

IF13.4

2024-10-12

PREAI

Gallitto, Matthew; Zhang, Xu; De Los Santos, Genesis; Wei, Hong-Jian; Fernandez, Ester Calvo; Duan, Shoufu; Sedor, Geoffrey; Yoh, Nina; Kokossis, Danae; Angel, J. Carlos; Wang, Yi-Fang; White, Erin; Kinslow, Connor J.; Berg, Xander; Tomassoni, Lorenzo; Zandkarimi, Fereshteh; Chio, Iok In Christine; Canoll, Peter; Bruce, Jeffrey N.; Feldstein, Neil A.; Gartrell, Robyn D.; Cheng, Simon K.; Garvin, James H.; Zacharoulis, Stergios; Wechsler-Reya, Robert J.; Pavisic, Jovana; Califano, Andrea; Zhang, Zhiguo; Wu, Cheng-Chia

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Disrupting local immunosuppression through combination myCAF/myeloid targeting in pancreatic cancer

CANCER RESEARCH

IF16.6

2024-09-15

PREAI

Hasselluhn, Marie C.; Vlahos, Lukas; Thomas, Dafydd; Waterbury, Quin T.; Garcia, Alvaro Curiel; Decker-Farrell, Amanda R.; Dalton, Tanner C.; Sastra, Stephen A.; Palermo, Carmine F.; Wang, Timothy C.; Califano, Andrea; Olive, Kenneth P.

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Network-based elucidation of colon cancer drug resistance mechanisms by phosphoproteomic time-series analysis

NATURE COMMUNICATIONS

IF15.7

2024-05-09

OAAI

Rosenberger, George; Li, Wenxue; Turunen, Mikko; He, Jing; Subramaniam, Prem S.; Pampou, Sergey; Griffin, Aaron T.; Karan, Charles; Kerwin, Patrick; Murray, Diana; Honig, Barry; Liu, Yansheng; Califano, Andrea

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The Wnt-dependent master regulator NKX1-2 controls mouse pre-implantation development

STEM CELL REPORTS

IF5.1

2024-05-01

OAAI

Nakagawa, Shoma; Carnevali, Davide; Tan, Xiangtian; Alvarez, Mariano J.; Parfitt, David-Emlyn; Di Vicino, Umberto; Arumugam, Karthik; Shin, William; Aranda, Sergi; Normanno, Davide; Sebastian-Perez, Ruben; Cannata, Chiara; Cortes, Paola; Neguembor, Maria Victoria; Shen, Michael M.; Califano, Andrea; Cosma, Maria Pia

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Subtype-selective prenylated isoflavonoids disrupt regulatory drivers of MYCN-amplified cancers

CELL CHEMICAL BIOLOGY

IF7.2

2024-04-01

PREAI

Stokes, Michael E.; Vasciaveo, Alessandro; Small, Jonnell Candice; Zask, Arie; Reznik, Eduard; Smith, Nailah; Wang, Qian; Daniels, Jacob; Forouhar, Farhad; Rajbhandari, Presha; Califano, Andrea; Stockwell, Brent R.

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Targeting NSD2 to reverse lineage plasticity and drug resistance in neuroendocrine prostate cancer and subtypes of mCRPC

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Li, Jia J.; Vasciaveo, Alessandro; Karagiannis, Dimitrios; Chen, Xiao; Yu, Chen; Califano, Andrea; Lu, Chao; Shen, Michael M.

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Disrupting local immunosuppression by combined myCAF/myeloid targeting in pancreatic cancer

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Hasselluhn, Marie C.; Thomas, Dafydd; Vlahos, Lukas; Curiel-Garcia, Alvaro; Decker-Farrell, Amanda R.; Dalton, Tanner C.; Sastra, Stephen A.; Palermo, Carmine F.; Califano, Andrea; Olive, Kenneth P.

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Resistance to RAS-GTP inhibition in models of pancreatic ductal adenocarcinoma arises downstream of RAS effectors

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Wasko, Urszula N.; Jiang, Jingjing; Wang, Yingyun; Tomassoni, Lorenzo; Jiang, Lingyan; Menard, Marie; Curiel-Garcia, Alvaro; Dalton, Tanner C.; Orlen, Margo; Edwards, Cole; Stalnecker, Clint; Dilly, Julien; Chang, Stephanie; Sastra, Stephen A.; Palermo, Carmine F.; Baslan, Timour; Tian, Sha; Holderfield, Matthew; Quintana, Elsa; Wang, Zhengping; Smith, Jacqueline A.; Califano, Andrea; Wildes, David; Aguirre, Andrew J.; Vonderheide, Robert H.; Stanger, Ben Z.; Lowe, Scott W.; Der, Channing J.; Singh, Mallika; Olive, Kenneth P.

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A systems biology approach for identifying targetable vulnerabilities in Ewing sarcoma

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Dela Cruz, Filemon S.; Mundi, Prabhjot S.; Siddiquee, Armaan; Guillan, Kristina; You, Daoqi; Sanchez, Glorymar Ibanez; Ndengu, Andoyo; Califano, Andrea; Kung, Andrew L.

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Adaptive heterogeneity enables the survival of residual malignant PDAC cells in response to RAS-GTP inhibition

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Tomassoni, Lorenzo; Wasko, Urszula N.; Garcia, Alvaro C.; Dalton, Tanner C.; Laise, Pasquale; Sastra, Stephen A.; Palermo, Carmine F.; Califano, Andrea; Olive, Kenneth P.

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Research Directions