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W. Ian Lipkin

Rakai Health Sciences Program

108H-index
551Paper Count
5.0WCitation Count
Published Papers 296
Publication Date
Aging and Host Responses to Severe Infection: Proteomic Analysis of a Prospective Multicenter Cohort From Uganda
err2025-10-01
err0
PREAI
errMartins, Gabriel Conte Cortez; Lutwama, Julius J.; Owor, Nicholas; Tomoiaga, Alin S.; Ross, Jesse E.; Lu, Xuan; Nsereko, Christopher; Nayiga, Irene; Kyebambe, Stephen; Shinyale, Joseph; Ochar, Thomas; Kiwubeyi, Moses; Nankwanga, Rittah; Nie, Kai; Xie, Hui; Miake-Lye, Sam; Villagomez, Bryan; Qi, Jingjing; Reynolds, Steven J.; Nakibuuka, Martina Cathy; Kayiwa, John; Haumba, Mercy; Nakaseegu, Joweria; Che, Xiaoyu; Kim-Schulze, Seunghee; Lipkin, W. Ian; O'Donnell, Max R.; Bakamutumaho, Barnabas; Cummings, Matthew J.
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Identification of transcriptomic sepsis endotypes in sub-Saharan Africa: derivation, validation, and global alignment in two Ugandan cohorts
err2025-07-29
err0
errOAAI
errMatthew J. Cummings; Julius J. Lutwama; Alin S. Tomoiaga; Meng Zhao; Nicholas Owor; Xuan Lu; Peter James Eliku; Jesse E. Ross; Christopher Nsereko; Irene Nayiga; Stephen Kyebambe; John Bosco Nsubuga; Joseph Shinyale; Ignatius Asasira; Tonny Kiyingi; Thomas Ochar; Moses Kiwubeyi; Rittah Nankwanga; Steven J. Reynolds; Martina Cathy Nakibuuka; John Kayiwa; Mercy Haumba; Joweria Nakaseegu; Xiaoyu Che; Kai Nie; Seunghee Kim-Schulze; Sankar Ghosh; W. Ian Lipkin; Max R. O’Donnell; Barnabas Bakamutumaho
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Molecular phenotypes of critical illness confer prognostic and biological enrichment in sub-Saharan Africa: a prospective cohort study from Uganda
errTHORAX
IF7.7
err2024-12-25
err0
PREAI
errCummings, Matthew J.; Lutwama, Julius J.; Tomoiaga, Alin S.; Owor, Nicholas; Lu, Xuan; Ross, Jesse E.; Muwanga, Moses; Nsereko, Christopher; Nayiga, Irene; Nie, Kai; Kayiwa, John; Che, Xiaoyu; Wayengera, Misaki; Kim-Schulze, Seunghee; Lipkin, W. Ian; O'Donnell, Max R.; Bakamutumaho, Barnabas
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Identification of reactive Borrelia burgdorferi peptides associated with Lyme disease
errMBIO
IF4.7
err2024-10-16
err1
errOAAI
errTokarz, Rafal; Guo, Cheng; Sanchez-Vicente, Santiago; Horn, Elizabeth; Eschman, Aleah; Turk, Siu Ping; Lipkin, W. Ian; Marques, Adriana
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COVID-19 immune signatures in Uganda persist in HIV co-infection and diverge by pandemic phase
err2024-02-17
err0
errOAAI
errCummings, Matthew J.; Bakamutumaho, Barnabas; Lutwama, Julius J.; Owor, Nicholas; Che, Xiaoyu; Astorkia, Maider; Postler, Thomas S.; Kayiwa, John; Kiconco, Jocelyn; Muwanga, Moses; Nsereko, Christopher; Rwamutwe, Emmanuel; Nayiga, Irene; Kyebambe, Stephen; Haumba, Mercy; Bosa, Henry Kyobe; Ocom, Felix; Watyaba, Benjamin; Kikaire, Bernard; Tomoiaga, Alin S.; Kisaka, Stevens; Kiwanuka, Noah; Lipkin, W. Ian; O'Donnell, Max R.
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Validation of the VirCapSeq-VERT system for differential diagnosis, detection, and surveillance of viral infections
err2024-01-17
err5
errOAAI
errKapoor, Vishal; Briese, Thomas; Ranjan, Amit; Donovan, William M.; Mansukhani, Mahesh M.; Chowdhary, Rashmi; Lipkin, W. Ian
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Bayesian Statistics Improves Biological Interpretability of Metabolomics Data from Human Cohorts
err2023-08-31
err3
errOAAI
errBrydges, Christopher; Che, Xiaoyu; Lipkin, Walter Ian; Fiehn, Oliver
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Pathogenesis and outcome of VA1 astrovirus infection in the human brain are defined by disruption of neural functions and imbalanced host immune responses
err2023-08-18
err4
errOAAI
errMaximova, Olga A.; Weller, Melodie L.; Krogmann, Tammy; Sturdevant, Daniel E.; Ricklefs, Stacy; Virtaneva, Kimmo; Martens, Craig; Wollenberg, Kurt; Minai, Mahnaz; Moore, Ian N.; Sauter, Craig S.; Barker, Juliet N.; Lipkin, W. Ian; Seilhean, Danielle; Nath, Avindra; Cohen, Jeffrey I.
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A Transcriptomic Classifier Model Identifies High-Risk Endotypes in a Prospective Study of Sepsis in Uganda
err2023-08-07
err2
PREAI
errCummings, Matthew J.; Bakamutumaho, Barnabas; Tomoiaga, Alin S.; Owor, Nicholas; Jain, Komal; Price, Adam; Kayiwa, John; Namulondo, Joyce; Byaruhanga, Timothy; Muwanga, Moses; Nsereko, Christopher; Nayiga, Irene; Kyebambe, Stephen; Sameroff, Stephen; Che, Xiaoyu; Lutwama, Julius J.; Lipkin, W. Ian; O'Donnell, Max R.
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A multicenter virome analysis of blood, feces, and saliva in myalgic encephalomyelitis/chronic fatigue syndrome
err2023-08-01
err6
errOAAI
errBriese, Thomas; Tokarz, Rafal; Bateman, Lucinda; Che, Xiaoyu; Guo, Cheng; Jain, Komal; Kapoor, Vishal; Levine, Susan; Hornig, Mady; Oleynik, Alexandra; Quan, Phenix-Lan; Wong, Wai H.; Williams, Brent L.; Vernon, Suzanne D.; Klimas, Nancy G.; Peterson, Daniel L.; Montoya, Jose G.; Lipkin, Walter Ian
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Beyond the symptom: the biology of fatigue
errSLEEP
IF4.9
err2023-05-24
err15
errOAAI
errRaizen, David M.; Mullington, Janet; Anaclet, Christelle; Clarke, Gerard; Critchley, Hugo; Dantzer, Robert; Davis, Ronald; Drew, Kelly L.; Fessel, Josh; Fuller, Patrick M.; Gibson, Erin M.; Harrington, Mary; Lipkin, W. Ian; Klerman, Elizabeth B.; Klimas, Nancy; Komaroff, Anthony L.; Koroshetz, Walter; Krupp, Lauren; Kuppuswamy, Anna; Lasselin, Julie; Lewis, Laura D.; Magistretti, Pierre J.; Matos, Heidi Y.; Miaskowski, Christine; Miller, Andrew H.; Nath, Avindra; Nedergaard, Maiken; Opp, Mark R.; Ritchie, Marylyn D.; Rogulja, Dragana; Rolls, Asya; Salamone, John D.; Saper, Clifford; Whittemore, Vicky; Wylie, Glenn; Younger, Jarred; Zee, Phyllis C.; Heller, H. Craig
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Proteomics and cytokine analyses distinguish myalgic encephalomyelitis/chronic fatigue syndrome cases from controls
err2023-05-13
err14
errOAAI
errGiloteaux, Ludovic; Li, Jiayin; Hornig, Mady; Lipkin, W. Ian; Ruppert, David; Hanson, Maureen R. R.
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Metabolomic analysis of maternal mid-gestation plasma and cord blood in autism spectrum disorders
err2023-04-10
err4
PREAI
errChe, Xiaoyu; Roy, Ayan; Bresnahan, Michaeline; Mjaaland, Siri; Reichborn-Kjennerud, Ted; Magnus, Per; Stoltenberg, Camilla; Shang, Yimeng; Zhang, Keming; Susser, Ezra; Fiehn, Oliver; Lipkin, W. Ian
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Attainment and loss of early social-communication skills across neurodevelopmental conditions in the Norwegian Mother, Father and Child Cohort Study
err2023-03-27
err5
errOAAI
errHavdahl, Alexandra; Farmer, Cristan; Suren, Pal; oyen, Anne-Siri; Magnus, Per; Susser, Ezra; Lipkin, W. Ian; Reichborn-Kjennerud, Ted; Stoltenberg, Camilla; Bishop, Somer; Thurm, Audrey
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Natural history of nonhuman primates after conjunctival exposure to Ebola virus
err2023-03-13
err7
errOAAI
errCross, Robert W.; Prasad, Abhishek N.; Woolsey, Courtney B.; Agans, Krystle N.; Borisevich, Viktoriya; Dobias, Natalie S.; Comer, Jason E.; Deer, Daniel J.; Geisbert, Joan B.; Rasmussen, Angela L.; Lipkin, Walter Ian; Fenton, Karla A.; Geisbert, Thomas W.
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A potential role for SARS-CoV-2 small viral RNAs in targeting host microRNAs and modulating gene expression
err2022-12-15
err5
errOAAI
errNeeb, Zachary T.; Ritter, Alexander J.; Chauhan, Lokendra V.; Katzman, Sol; Lipkin, W. Ian; Mishra, Nischay; Sanford, Jeremy R.
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HIV infection drives pro-inflammatory immunothrombotic pathway activation and organ dysfunction among adults with sepsis in Uganda
errAIDS
IF3.1
err2022-10-21
err4
errOAAI
errCummings, Matthew J.; Bakamutumaho, Barnabas; Price, Adam; Owor, Nicholas; Kayiwa, John; Namulondo, Joyce; Byaruhanga, Timothy; Jain, Komal; Postler, Thomas S.; Muwanga, Moses; Nsereko, Christopher; Nayiga, Irene; Kyebambe, Stephen; Che, Xiaoyu; Sameroff, Stephen; Tokarz, Rafal; Shah, Shivang S.; Larsen, Michelle H.; Lipkin, W. Ian; Lutwama, Julius J.; O'Donnell, Max R.
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Detection of antibodies to Anaplasma phagocytophilum and Babesia microti using linear peptides
err2022-09-01
err2
errOAAI
errTagliafierro, Teresa; Joshi, Shreyas; Sameroff, Stephen; Marques, Adriana; Dumler, J. Stephen; Mishra, Nischay; Sanchez-Vicente, Santiago; Wormser, Gary P.; Marcos, Luis A.; Lipkin, W. Ian; Tokarz, Rafal
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