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Ben Berkhout

University of Zurich

91H-index
682Paper Count
3.8WCitation Count
Published Papers 280
Publication Date
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HIV-2 evades restriction by ZAP through adaptations in the U3 LTR region despite increased CpG levels
errNucleic Acids Research
IF13.1
err2025-08-30
err0
errOAAI
errDorota Kmiec; Rayhane Nchioua; Alexander Gabel; Asimenia Vlachou; Sabina Ganskih; Sümeyye Erdemci-Evin; Stacey A. Lapp; Diane G. Carnathan; Steven E. Bosinger; Ben Berkhout; Atze T. Das; Mathias Munschauer; Frank Kirchhoff
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errSave
Long-term effect of temporary ART initiated during primary HIV-1 infection on viral persistence
errNature Communications
IF15.7
err2025-07-30
err0
errOAAI
errAlexander O. Pasternak; Pien M. van Paassen; Yara L. Verschoor; Jelmer Vroom; Karel A. van Dort; Irma Maurer; Marlous L. Grijsen; Ferdinand W. Wit; Godelieve J. de Bree; Neeltje A. Kootstra; Jan M. Prins; Ben Berkhout
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errSave
Phenotyping Viral Reservoirs to Reveal HIV-1 Hiding Places
errCURRENT HIV/AIDS REPORTS
IF4.4
err2025-02-04
err0
errOAAI
errChen, Wenxuan; Berkhout, Ben; Pasternak, Alexander O.
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errSave
The genetic architecture of HIV-1 virulence
errVIRUS EVOLUTION
IF4
err2025-01-01
err0
PREAI
errBlanquart, Francois; Wymant, Chris; Hall, Matthew; Power, Robert; Golubchik, Tanya; Gall, Astrid; De Cesare, Mariateresa; Macintyre-Cockett, George; Bakker, Margreet; Bezemer, Daniela; Gabrielaite, Migle; Ong, Swee Hoe; Kendall, Michelle; Sauter, Rafael; Bannert, Norbert; Fellay, Jacques; Grabowski, M. Kate; Gunsenheimer-Bartmeyer, Barbara; Gunthard, Huldrych F.; Kivela, Pia; Kouyos, Roger D.; Laeyendecker, Oliver; Marvig, Rasmus L.; Meixenberger, Karolin; Meyer, Laurence; van Sighem, Ard; Bonsall, David; Van Der Valk, Marc; Berkhout, Ben; Kellam, Paul; Cornelissen, Marion; Reiss, Peter; Fraser, Christophe
errShare
errSave
Virus Research: 40 years and still going strong
errVIRUS RESEARCH
IF2.7
err2024-12-01
err0
errOAAI
errBerkhout, Ben; Domingo, Esteban; Suzuki, Nobuhiro
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errSave
Evaluation of the effect of RNA secondary structure on Cas13d-mediated target RNA cleavage
errMOLECULAR THERAPY NUCLEIC ACIDS
IF6.1
err2024-09-01
err1
errOAAI
errHussein, Mouraya; Liu, Ye; Vink, Monique; Kroon, Pascal Z.; Das, Atze T.; Berkhout, Ben; Herrera-Carrillo, Elena
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errSave
Reverse transcription of HIV-1 2-LTR circle transcripts does frequently cause 3'-polypurine tract mutations implicated in dolutegravir resistance
errJOURNAL OF VIROLOGY
IF3.8
err2024-06-13
err1
PREAI
errDekker, Jose G.; Klaver, Bep; Berkhout, Ben; Das, Atze T.
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errSave
CRISPR-Cas attack of HIV-1 proviral DNA can cause unintended deletion of surrounding cellular DNA
errJOURNAL OF VIROLOGY
IF3.8
err2023-12-21
err3
errOAAI
errLiu, Ye; Binda, Caroline S.; Berkhout, Ben; Das, Atze T.
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errSave
FC gamma receptor gene polymorphisms and reservoir size in HIV patients in Ghana
errBMJ GLOBAL HEALTH
IF6.1
err2023-12-17
err0
errOAAI
errLamptey, Helena; Pasternak, Alexander O.; Bonney, Evelyn Y.; Aboagye, James O.; Boateng, Anthony T.; Abana, Christopher Z. Y.; Adams, Philipp; Cicilionyte, Aurelija; Berkhout, Ben; Adu, Bright; Kyei, George B.
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errSave
AAV vectors displaying bispecific DARPins enable dual-control targeted gene delivery
errBIOMATERIALS
IF12.9
err2023-12-01
err6
errOAAI
errTheuerkauf, Samuel A.; Herrera-Carrillo, Elena; John, Fabian; Zinser, Luca J.; Molina, Mariano A.; Riechert, Vanessa; Thalheimer, Frederic B.; Boerner, Kathleen; Grimm, Dirk; Chlanda, Petr; Berkhout, Ben; Buchholz, Christian J.
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errSave
In-house ELISA protocols for capsid p24 detection of diverse HIV isolates
errVIROLOGY JOURNAL
IF3.8
err2023-11-17
err3
errOAAI
errMolina, Mariano A.; Vink, Monique; Berkhout, Ben; Herrera-Carrillo, Elena
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errSave
'Zombie' proviruses in the spotlight: exploring the dark side of HIV persistence
errAIDS
IF3.1
err2023-10-26
err2
PREAI
errPasternak, Alexander O.; Tsukamoto, Tetsuo; Berkhout, Ben
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errSave
CRISPR-Cas12b enables a highly efficient attack on HIV proviral DNA in T cell cultures
errBIOMEDICINE & PHARMACOTHERAPY
IF7.5
err2023-09-01
err2
errOAAI
errFan, Minghui; Bao, Yuanling; Berkhout, Ben; Herrera-Carrillo, Elena
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errSave
FcγRIIA-specific DARPins as novel tools in blood cell analysis and platelet aggregation
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2023-06-01
err1
errOAAI
errRiechert, Vanessa; Hein, Sascha; Visser, Mayken; Zimmermann, Mathias; Wesche, Jan; Adams, Philipp A.; Theuerkauf, Samuel A.; Jamali, Arezoo; Wangorsch, Andrea; Reuter, Andreas; Pasternak, Alexander O.; Hartmann, Jessica; Greinacher, Andreas; Herrera-Carrillo, Elena; Berkhout, Ben; Cichutek, Klaus; Buchholz, Christian J.
errShare
errSave
HIV-1 3′-Polypurine Tract Mutations Confer Dolutegravir Resistance by Switching to an Integration-Independent Replication Mechanism via 1-LTR Circles
errJOURNAL OF VIROLOGY
IF3.8
err2023-05-31
err7
errOAAI
errDekker, Jose G.; Klaver, Bep; Berkhout, Ben; Das, Atze T.
errShare
errSave
HIV persistence: silence or resistance?
errCURRENT OPINION IN VIROLOGY
IF5.1
err2023-04-01
err16
errOAAI
errPasternak, Alexander; Berkhout, Ben
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errSave
Efficient CRISPR-Cas13d-Based Antiviral Strategy to Combat SARS-CoV-2
errVIRUSES-BASEL
IF3.5
err2023-03-06
err8
errOAAI
errHussein, Mouraya; dos Ramos, Zaria Andrade; Vink, Monique A.; Kroon, Pascal; Yu, Zhenghao; Enjuanes, Luis; Zuniga, Sonia; Berkhout, Ben; Herrera-Carrillo, Elena
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errSave
HIV co-opts a cellular antiviral mechanism, activation of stress kinase PKR by its RNA, to enable splicing of rev/tat mRNA
errCELL AND BIOSCIENCE
IF6.2
err2023-02-11
err8
errOAAI
errNamer, Lise Sarah; Harwig, Alex; Heynen, Stephan P. P.; Das, Atze T. T.; Berkhout, Ben; Kaempfer, Raymond
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errSave
Silent codon positions in the A-rich HIV RNA genome that do not easily become A: Restrictions imposed by the RNA sequence and structure
errVIRUS EVOLUTION
IF4
err2022-08-04
err1
errOAAI
errBerkhout, Ben; van Hemert, Formijn J.
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errSave
SARS-CoV-2 Evolution: On the Sudden Appearance of the Omicron Variant COMMENT
errJOURNAL OF VIROLOGY
IF3.8
err2022-04-13
err47
errOAAI
errBerkhout, Ben; Herrera-Carrillo, Elena
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errSave

Research Directions

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Co-authors
Cooperation Journals
J
Jan H.J. Hoeijmakers
H-index: 122 · Papers: 555
P
Pei‐Jer Chen
H-index: 111 · Papers: 1.1K
H
Hergen Spits
H-index: 111 · Papers: 502
C
Caroline Sabin
H-index: 107 · Papers: 1.1K
P
Peter Reiss
H-index: 106 · Papers: 832
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