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NR4A1 and NR4A2 orphan nuclear receptors regulate endothelial-to-hematopoietic transition in mouse hematopoietic stem cell specification da Bandeira, Diana Sa; Nevitt, Chris D.; Dezem, Felipe Segato; Marcao, Maycon; Liu, Yutian; Kelley, Zakiya; Dubose, Hannah; Chabot, Ashley; Hall, Trent; Caprio, Claire; Okhomina, Victoria; Kang, Guolian; Plummer, Jasmine; McKinney-Freeman, Shannon; Clements, Wilson K.; Ganuza, Miguel Share Save
snPATHO-seq, a versatile FFPE single-nucleus RNA sequencing method to unlock pathology archives Wang, Taopeng; Roach, Michael J.; Harvey, Kate; Morlanes, Javier Escudero; Kiedik, Beata; Al-Eryani, Ghamdan; Greenwald, Alissa; Kalavros, Nikolaos; Dezem, Felipe Segato; Ma, Yuling; Pita-Juarez, Yered H.; Wise, Kellie; Degletagne, Cyril; Elz, Anna; Hadadianpour, Azi; Johanneson, Jack; Pakiam, Fiona; Ryu, Heeju; Newell, Evan W.; Tonon, Laurie; Kohlway, Andrew; Drennon, Tingsheng; Abousoud, Jawad; Stott, Ryan; Lund, Paul; Durruthy, Jens; Vallejo, Andres F.; Li, Wenyan; Salomon, Robert; Kaczorowski, Dominik; Warren, Joanna; Butler, Lisa M.; O'Toole, Sandra; Plummer, Jasmine; Vlachos, Ioannis S.; Lundeberg, Joakim; Swarbrick, Alexander; Martelotto, Luciano G. Share Save
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Integrative multi-omics analyses to identify the genetic and functional mechanisms underlying ovarian cancer risk regions Dareng, Eileen O.; Coetzee, Simon G.; Tyrer, Jonathan P.; Peng, Pei-Chen; Rosenow, Will; Chen, Stephanie; Davis, Brian D.; Dezem, Felipe Segato; Seo, Ji-Heui; Nameki, Robbin; Reyes, Alberto L.; Aben, Katja K. H.; Anton-Culver, Hoda; Antonenkova, Natalia N.; Aravantinos, Gerasimos; Bandera, Elisa V.; Freeman, Laura E. Beane; Beckmann, Matthias W.; Beeghly-Fadiel, Alicia; Benitez, Javier; Bernardini, Marcus Q.; Bjorge, Line; Black, Amanda; Bogdanova, Natalia V.; Bolton, Kelly L.; Brenton, James D.; Budzilowska, Agnieszka; Butzow, Ralf; Cai, Hui; Campbell, Ian; Cannioto, Rikki; Chang-Claude, Jenny; Chanock, Stephen J.; Chen, Kexin; Chenevix-Trench, Georgia; Chiew, Yoke-Eng; Cook, Linda S.; DeFazio, Anna; Dennis, Joe; Doherty, Jennifer A.; Doerk, Thilo; du Bois, Andreas; Duerst, Matthias; Eccles, Diana M.; Ene, Gabrielle; Fasching, Peter A.; Flanagan, James M.; Fortner, Renee T.; Fostira, Florentia; Gentry-Maharaj, Aleksandra; Giles, Graham G.; Goodman, Marc T.; Gronwald, Jacek; Haiman, Christopher A.; Hakansson, Niclas; Heitz, Florian; Hildebrandt, Michelle A. T.; Hogdall, Estrid; Hogdall, Claus K.; Huang, Ruea-Yea; Jensen, Allan; Jones, Michael E.; Kang, Daehee; Karlan, Beth Y.; Karnezis, Anthony N.; Kelemen, Linda E.; Kennedy, Catherine J.; Khusnutdinova, Elza K.; Kiemeney, Lambertus A.; Kjaer, Susanne K.; Kupryjanczyk, Jolanta; Labrie, Marilyne; Lambrechts, Diether; Larson, Melissa C.; Le, Nhu D.; Lester, Jenny; Li, Lian; Lubinski, Jan; Lush, Michael; Marks, Jeffrey R.; Matsuo, Keitaro; May, Taymaa; McLaughlin, John R.; McNeish, Iain A.; Menon, Usha; Missmer, Stacey; Modugno, Francesmary; Moffitt, Melissa; Monteiro, Alvaro N.; Moysich, Kirsten B.; Narod, Steven A.; Nguyen-Dumont, Tu; Odunsi, Kunle; Olsson, Hakan; Onland-Moret, N. Charlotte; Park, Sue K.; Pejovic, Tanja; Permuth, Jennifer B.; Piskorz, Anna; Prokofyeva, Darya; Riggan, Marjorie J.; Risch, Harvey A.; Rodriguez-Antona, Cristina; Rossing, Mary Anne; Sandler, Dale P.; Setiawan, V. Wendy; Shan, Kang; Song, Honglin; Southey, Melissa C.; Steed, Helen; Sutphen, Rebecca; Swerdlow, Anthony J.; Teo, Soo Hwang; Terry, Kathryn L.; Thompson, Pamela J.; Thomsen, Liv Cecilie Vestrheim; Titus, Linda; Trabert, Britton; Travis, Ruth; Tworoger, Shelley S.; Valen, Ellen; Van Nieuwenhuysen, Els; Edwards, Digna Velez; Vierkant, Robert A.; Webb, Penelope M.; Weinberg, Clarice R.; Weise, Rayna Matsuno; Wentzensen, Nicolas; White, Emily; Winham, Stacey J.; Wolk, Alicja; Woo, Yin-Ling; Wu, Anna H.; Yan, Li; Yannoukakos, Drakoulis; Zeinomar, Nur; Zheng, Wei; Ziogas, Argyrios; Berchuck, Andrew; Goode, Ellen L.; Huntsman, David G.; Pearce, Celeste L.; Ramus, Susan J.; Sellers, Thomas A.; Freedman, Matthew L.; Lawrenson, Kate; Schildkraut, Joellen M.; Hazelett, Dennis; Plummer, Jasmine T.; Kar, Siddhartha; Jones, Michelle R.; Pharoah, Paul D. P.; Gayther, Simon A. Share Save
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FixNCut: single-cell genomics through reversible tissue fixation and dissociation Jimenez-Gracia, Laura; Marchese, Domenica; Nieto, Juan C.; Caratu, Ginevra; Melon-Ardanaz, Elisa; Gudino, Victoria; Roth, Sara; Wise, Kellie; Ryan, Natalie K.; Jensen, Kirk B.; Hernando-Momblona, Xavier; Bernardes, Joana P.; Tran, Florian; Sievers, Laura Katharina; Schreiber, Stefan; van den Berge, Maarten; Kole, Tessa; van der Velde, Petra L.; Nawijn, Martijn C.; Rosenstiel, Philip; Batlle, Eduard; Butler, Lisa M.; Parish, Ian A.; Plummer, Jasmine; Gut, Ivo; Salas, Azucena; Heyn, Holger; Martelotto, Luciano G. Share Save
Multi-lineage heart-chip models drug cardiotoxicity and enhances maturation of human stem cell-derived cardiovascular cells Mozneb, Maedeh; Jenkins, Amelia; Sances, Samuel; Pohlman, Stephany; Workman, Michael J.; West, Dylan; Ondatje, Briana; El-Ghazawi, Kareem; Woodbury, Amanda; Garcia, Veronica J.; Patel, Shachi; Arzt, Madelyn; Dezem, Felipe; Laperle, Alex H.; Moser, V. Alexandra; Ho, Ritchie; Yucer, Nur; Plummer, Jasmine; Barrett, Robert J.; Svendsen, Clive N.; Sharma, Arun Share Save
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A machine learning one-class logistic regression model to predict stemness for single cell transcriptomics and spatial omics Dezem, Felipe Segato; Marcao, Maycon; Ben-Cheikh, Bassem; Nikulina, Nadya; Omotoso, Ayodele; Burnett, Destiny; Coelho, Priscila; Hurley, Judith; Gomez, Carmen; Phan-Everson, Tien; Ong, Giang; Martelotto, Luciano; Lewis, Zachary R.; George, Sophia; Braubach, Oliver; Malta, Tathiane M.; Plummer, Jasmine Share Save
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A multiomic spatial atlas of breast cancer in women of African ancestry Plummer, Jasmine T.; Nikulina, Nadezhda; Omotoso, Ayodele; Burnett, Destiny; Coelho, Priscilla; Badal, Simone; Hurley, Judith; Gomez, Carmen; Ji, Ha Yeun; Marcao, Maycon; Segato, Felipe Dezem; Braubach, Oliver; George, Sophia Share Save
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