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Quantitatively defined stromal B cell aggregates are associated with response to checkpoint inhibitors in unresectable melanoma Smithy, James W.; Peng, Xiyu; Ehrich, Fiona D.; Moy, Andrea P.; Yosofvand, Mohammad; Maher, Colleen; Aleynick, Nathaniel; Vanguri, Rami; Zhuang, Mingqiang; Lee, Jasme; Bleile, MaryLena; Li, Yanyun; Postow, Michael A.; Panageas, Katherine S.; Hollmann, Travis J.; Callahan, Margaret K.; Shen, Ronglai Share Save
Immunologic signatures of response and resistance to nivolumab with ipilimumab in advanced metastatic cancer Tsimberidou, Apostolia M.; Alayli, Farah A.; Okrah, Kwame; Drakaki, Alexandra; Khalil, Danny N.; Kummar, Shivaani; Khan, Saad A.; Hodi, F. Stephen; Oh, David Y.; Cabanski, Christopher R.; Gautam, Shikha; Meier, Stefanie L.; Amouzgar, Meelad; Pfeiffer, Shannon M.; Kageyama, Robin; Yang, Enjun; Spasic, Marko; Tetzlaff, Michael T.; Foo, Wai Chin; Hollmann, Travis J.; Li, Yanyun; Adamow, Matthew; Wong, Phillip; Moore, Jonni S.; Velichko, Sharlene; Chen, Richard O.; Kumar, Dinesh; Bucktrout, Samantha; Ibrahim, Ramy; Dugan, Ute; Salvador, Lisa; Hubbard-Lucey, Vanessa M.; O'Donnell-Tormey, Jill; Santulli-Marotto, Sandra; Butterfield, Lisa H.; Da Silva, Diane M.; Fairchild, Justin; Lavallee, Theresa M.; Padron, Lacey J.; Sharma, Padmanee Share Save
Nivolumab for mismatch-repair-deficient or hypermutated gynecologic cancers: a phase 2 trial with biomarker analyses Friedman, Claire F.; Manning-Geist, Beryl L.; Zhou, Qin; Soumerai, Tara; Holland, Aliya; Da Cruz Paula, Arnaud; Green, Hunter; Ozsoy, Melih Arda; Iasonos, Alexia; Hollmann, Travis; Leitao, Mario M.; Mueller, Jennifer J.; Makker, Vicky; Tew, William P.; O'Cearbhaill, Roisin E.; Liu, Ying L.; Rubinstein, Maria M.; Troso-Sandoval, Tiffany; Lichtman, Stuart M.; Schram, Alison; Kyi, Chrisann; Grisham, Rachel N.; Causa Andrieu, Pamela; Wherry, E. John; Aghajanian, Carol; Weigelt, Britta; Hensley, Martee L.; Zamarin, Dmitriy Share Save
Rapid autopsy reveals the interplay of tumor heterogeneity at genomic, transcriptomic, and spatial dimensions Yao, Ning; Vanguri, Rami; Patel, Juber; Lihm, Jayon; Fisher, Andrew; Jarchum, Irene; Umeda, Shigeaki; Li, Hao; Ely, Scott; Hollmann, Travis; Iacobuzio-Donahue, Christine; Greenbaum, Benjamin Share Save
Integration of peripheral blood- and tissue-based biomarkers of response to immune checkpoint blockade in urothelial carcinoma Vanguri, Rami S.; Smithy, James W.; Li, Yanyun; Zhuang, Mingqiang; Maher, Colleen A.; Aleynick, Nathaniel; Peng, Xiyu; Al-Ahmadie, Hikmat; Funt, Samuel A.; Rosenberg, Jonathan E.; Iyer, Gopa; Bajorin, Dean; Mathews, James C.; Nadeem, Saad; Panageas, Katherine S.; Shen, Ronglai; Callahan, Margaret K.; Hollmann, Travis J. Share Save
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GABA Regulates Electrical Activity and Tumor Initiation in Melanoma Tagore, Mohita; Hergenreder, Emiliano; Perlee, Sarah C.; Cruz, Nelly M.; Menocal, Laura; Suresh, Shruthy; Chan, Eric; Baron, Maayan; Melendez, Stephanie; Dave, Asim; Chatila, Walid K.; Nsengimana, Jeremie; Koche, Richard P.; Hollmann, Travis J.; Ideker, Trey; Studer, Lorenz; Schietinger, Andrea; White, Richard M. Share Save
Tissue-specific features of the T cell repertoire after allogeneic hematopoietic cell transplantation in human and mouse DeWolf, Susan; Elhanati, Yuval; Nichols, Katherine; Waters, Nicholas R.; Nguyen, Chi L.; Slingerland, John B.; Rodriguez, Natasia; Lyudovyk, Olga; Giardina, Paul A.; Kousa, Anastasia I.; Andrlova, Hana; Ceglia, Nick; Fei, Teng; Kappagantula, Rajya; Li, Yanyun; Aleynick, Nathan; Baez, Priscilla; Murali, Rajmohan; Hayashi, Akimasa; Lee, Nicole; Gipson, Brianna; Rangesa, Madhumitha; Katsamakis, Zoe; Dai, Anqi; Blouin, Amanda G.; Arcila, Maria; Masilionis, Ignas; Chaligne, Ronan; Ponce, Doris M.; Landau, Heather J.; Politikos, Ioannis; Tamari, Roni; Hanash, Alan M.; Jenq, Robert R.; Giralt, Sergio A.; Markey, Kate A.; Zhang, Yanming; Perales, Miguel-Angel; Socci, Nicholas D.; Greenbaum, Benjamin D.; Iacobuzio-Donahue, Christine A.; Hollmann, Travis J.; van den Brink, Marcel R. M.; Peled, Jonathan U. Share Save
Stem cell-like T cell depletion in the recurrent head and neck cancer immune microenvironment Chen, Linda; Lee, Nancy; Sarkar, Reith; Katabi, Nora; Li, Yanyun; Morris, Luc; Wong, Richard; Sherman, Eric; Reis-Filho, Jorge S.; Hollmann, Travis; Riaz, Nadeem Share Save
Epstein-Barr virus shapes the tumor microenvironment in classical Hodgkin lymphoma Pourmaleki, Maryam; Jones, Caitlin J.; Mellinghoff, Sabrina D.; Greenstein, Brian; Kumar, Priyadarshini; Roshal, Mikhail; Hollmann, Travis J.; Socci, Nicholas D.; Dogan, Ahmet; Mellinghoff, Ingo K. Share Save
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Multimodal integration of radiology, pathology and genomics for prediction of response to PD-(L)1 blockade in patients with non-small cell lung cancer Vanguri, Rami S.; Luo, Jia; Aukerman, Andrew T.; Egger, Jacklynn, V; Fong, Christopher J.; Horvat, Natally; Pagano, Andrew; Araujo-Filho, Jose De Arimateia Batista; Geneslaw, Luke; Rizvi, Hira; Sosa, Ramon; Boehm, Kevin M.; Yang, Soo-Ryum; Bodd, Francis M.; Ventura, Katia; Hollmann, Travis J.; Ginsberg, Michelle S.; Gao, Jianjiong; Hellmann, Matthew D.; Sauter, Jennifer L.; Shah, Sohrab P. Share Save
Genomic and transcriptomic analysis of a library of small cell lung cancer patient-derived xenografts Caeser, Rebecca; Egger, Jacklynn, V; Chavan, Shweta; Socci, Nicholas D.; Jones, Caitlin Byrne; Kombak, Faruk Erdem; Asher, Marina; Roehrl, Michael H.; Shah, Nisargbhai S.; Allaj, Viola; Manoj, Parvathy; Tischfield, Sam E.; Kulick, Amanda; Meneses, Maximiliano; Iacobuzio-Donahue, Christine A.; Lai, W. Victoria; Bhanot, Umeshkumar; Baine, Marina K.; Rekhtman, Natasha; Hollmann, Travis J.; de Stanchina, Elisa; Poirier, John T.; Rudin, Charles M.; Sen, Triparna Share Save
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Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning Greenwald, Noah F.; Miller, Geneva; Moen, Erick; Kong, Alex; Kagel, Adam; Dougherty, Thomas; Fullaway, Christine Camacho; McIntosh, Brianna J.; Leow, Ke Xuan; Schwartz, Morgan Sarah; Pavelchek, Cole; Cui, Sunny; Camplisson, Isabella; Bar-Tal, Omer; Singh, Jaiveer; Fong, Mara; Chaudhry, Gautam; Abraham, Zion; Moseley, Jackson; Warshawsky, Shiri; Soon, Erin; Greenbaum, Shirley; Risom, Tyler; Hollmann, Travis; Bendall, Sean C.; Keren, Leeat; Graf, William; Angelo, Michael; Van Valen, David Share Save
LAG-3 expression on peripheral blood cells identifies patients with poorer outcomes after immune checkpoint blockade Shen, Ronglai; Postow, Michael A.; Adamow, Matthew; Arora, Arshi; Hannum, Margaret; Maher, Colleen; Wong, Phillip; Curran, Michael A.; Hollmann, Travis J.; Jia, Liwei; Al-Ahmadie, Hikmat; Keegan, Niamh; Funt, Samuel A.; Iyer, Gopa; Rosenberg, Jonathan E.; Bajorin, Dean F.; Chapman, Paul B.; Shoushtari, Alexander N.; Betof, Allison S.; Momtaz, Parisa; Merghoub, Taha; Wolchok, Jedd D.; Panageas, Katherine S.; Callahan, Margaret K. Share Save
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Metastasis and Immune Evasion from Extracellular cGAMP Hydrolysis Li, Jun; Duran, Mercedes A.; Dhanota, Ninjit; Chatila, Walid K.; Bettigole, Sarah E.; Kwon, John; Sriram, Roshan K.; Humphries, Matthew P.; Salto-Tellez, Manuel; James, Jacqueline A.; Hanna, Matthew G.; Melms, Johannes C.; Vallabhaneni, Sreeram; Litchfield, Kevin; Usaite, Ieva; Biswas, Dhruva; Bareja, Rohan; Li, Hao Wei; Martin, Maria Laura; Dorsaint, Princesca; Cavallo, Julie-Ann; Li, Peng; Pauli, Chantal; Gottesdiener, Lee; DiPardo, Benjamin J.; Hollmann, Travis J.; Merghoub, Taha; Wen, Hannah Y.; Reis-Filho, Jorge S.; Riaz, Nadeem; Su, Shin-San Michael; Kalbasi, Anusha; Vasan, Neil; Powell, Simon N.; Wolchok, Jedd D.; Elemento, Olivier; Swanton, Charles; Shoushtari, Alexander N.; Parkes, Eileen E.; Izar, Benjamin; Bakhoum, Samuel F. Share Save
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