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Delta-like ligand 3 (DLL3) landscape in pulmonary and extra-pulmonary neuroendocrine neoplasms Serrano, Alejandra G.; Rocha, Pedro; Lima, Cibelle Freitas; Stewart, Allison; Zhang, Bingnan; Diao, Lixia; Fujimoto, Junya; Cardnell, Robert J.; Lu, Wei; Khan, Khaja; Sable, Beate; Ellison, Aaron R.; Wistuba, Ignacio I.; Concannon, Kyle F.; Halperin, Daniel M.; Bogdan, Czerniak; Sircar, Kanishka; Zhang, Miao; Cargill, Kasey; Wang, Qi; Aparicio, Ana; Lazar, Alexander; Hernandez, Sharia; Estrella, Jeannelyn; Ramalingam, Preetha; El-Naggar, Adel; Kalhor, Neda; Gay, Carl M.; Byers, Lauren Averett; Soto, Luisa M. Solis Share Save
Multiregional transcriptomic profiling provides improved prognostic insight in localized non-small cell lung cancer Li, Chenyang; Nguyen, Thinh T.; Li, Jian-Rong; Song, Xingzhi; Fujimoto, Junya; Little, Latasha; Gumb, Curtis; Chow, Chi-Wan B.; Wistuba, Ignacio I.; Futreal, Andrew P.; Zhang, Jianhua; Hubert, Shawna M.; Heymach, John V.; Wu, Jia; Amos, Christopher I.; Zhang, Jianjun; Cheng, Chao Share Save
A Pan-Cancer Patient-Derived Xenograft Histology Image Repository with Genomic and Pathologic Annotations Enables Deep Learning Analysis White, Brian S.; Woo, Xing Yi; Koc, Soner; Sheridan, Todd; Neuhauser, Steven B.; Wang, Shidan; Evrard, Yvonne A.; Chen, Li; Pour, Ali Foroughi; Landua, John D.; Mashl, R. Jay; Davies, Sherri R.; Fang, Bingliang; Rosa, Maria Gabriela; Evans, Kurt W.; Bailey, Matthew H.; Chen, Yeqing; Xiao, Min; Rubinstein, Jill C.; Sanderson, Brian J.; Lloyd, Michael W.; Domanskyi, Sergii; Dobrolecki, Lacey E.; Fujita, Maihi; Fujimoto, Junya; Xiao, Guanghua; Fields, Ryan C.; Mudd, Jacqueline L.; Xu, Xiaowei; Hollingshead, Melinda G.; Jiwani, Shahanawaz; Acevedo, Saul; Davis-Dusenbery, Brandi N.; Robinson, Peter N.; Moscow, Jeffrey A.; Doroshow, James H.; Mitsiades, Nicholas; Kaochar, Salma; Pan, Chong-xian; Carvajal-Carmona, Luis G.; Welm, Alana L.; Welm, Bryan E.; Govindan, Ramaswamy; Li, Shunqiang; Davies, Michael A.; Roth, Jack A.; Meric-Bernstam, Funda; Xie, Yang; Herlyn, Meenhard; Ding, Li; Lewis, Michael T.; Bult, Carol J.; Dean II, Dennis A.; Chuang, Jeffrey H. Share Save
Spatial single-cell immune microenvironment analysis reveals the transition from innate to adaptive immune response during early lung adenocarcinoma carcinogenesis Zhu, Bo; Chen, Pingjun; Aminu, Muhammad; Fujimoto, Junya; Hong, Lingzhi; Moreira, Andre L.; Li, Jian-Rong; Tian, Yanhua; Soto, Luisa M. Solis; Roger, Parra Cuentas Edwin; Shi, Ou; Chen, Hong; Rojas, Frank R.; Vilar, Eduardo; Maitra, Anirban; Chen, Ken; Navin, Nicolas; Haymacker, Cara L.; Velcheti, Vamsidhar; Sterman, Daniel H.; Futreal, P. Andrew; Gibbons, Don L.; Wistuba, Ignacio I.; Heymach, John V.; Cheng, Chao; Pass, Harvey I.; Wu, Jia; Zhang, Jianjun Share Save
A multimodal spatial-omics atlas of lung precancer and progression to adenocarcinoma Sinjab, Ansam; Peng, Fuduan; Liu, Yunhe; Yang, Sujuan; Zhou, Tieling; Serrano, Alejandra G.; Feng, Jiping; Bolanos, Lorena Gomez; Han, Guangchun; Rosen, Daniel Gustavo; Swisher, Stephen G.; Spira, Avrum; Dubinett, Steven M.; Soto, Luisa M. Solis; Li, Mingyao; Fujimoto, Junya; Burks, Jared; Wistuba, Ignacio I.; Wang, Linghua; Kadara, Humam Share Save
Single-cell profiling reveals dynamic epithelial and immune cell interactions in the progression of lung adenocarcinoma Chen, Hong; Zhu, Bo; Fujimoto, Junya; Tian, Yanhua; Li, Jian-Rong; Li, Chenyang; Chen, Pingjun; Reuben, Alexandre; Nilsson, Monique; Le, Xiuning; Poteete, Alissa; Hubert, Shawna M.; Gibbons, Don L.; Wistuba, Ignacio I.; Wu, Jia; Cheng, Chao; Heymach, John V.; Zhang, Jianjun Share Save
Deep LearningeBased H-Score Quantification of Immunohistochemistry-Stained Images Wen, Zhuoyu; Luo, Danni; Wang, Shidan; Rong, Ruichen; Evers, Bret M.; Jia, Liwei; Fang, Yisheng; Daoud, Elena, V; Yang, Shengjie; Gu, Zifan; Arnerc, Emily N.; Lewis, Cheryl M.; Soto, Luisa M. Solis; Fujimoto, Junya; Behrens, Carmen; Wistuba, Ignacio I.; Yang, Donghan M.; Brekken, Rolf A.; O'Donnell, Kathryn A.; Xie, Yang; Xiao, Guanghua Share Save
Pathomic Features Reveal Immune and Molecular Evolution From Lung Preneoplasia to Invasive Adenocarcinoma Chen, Pingjun; Rojas, Frank R.; Hu, Xin; Serrano, Alejandra; Zhu, Bo; Chen, Hong; Hong, Lingzhi; Bandyoyadhyay, Rukhmini; Aminu, Muhammad; Kalhor, Neda; Lee, J. Jack; El Hussein, Siba; Khoury, Joseph D.; Pass, Harvey I.; Moreira, Andre L.; Velcheti, Vamsidhar; Sterman, Daniel H.; Fukuoka, Junya; Tabata, Kazuhiro; Su, Dan; Ying, Lisha; Gibbons, Don L.; Heymach, John, V; Wistuba, Ignacio I.; Fujimoto, Junya; Soto, Luisa M. Solis; Zhang, Jianjun; Wu, Jia Share Save
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A phase II trial of niraparib plus dostarlimab in relapsed small cell lung cancer and other high-grade neuroendocrine carcinomas Gay, Carl M.; Stewart, C. Allison; Frumovitz, Michael; Fujimoto, Junya; Xi, Yuann; Wang, Qi; Wang, Runsheng; Novegil, Veronica; Altan, Mehmet; Cascone, Tina; Dasari, Arvind; Elamin, Yasir Y.; Fossella, Frank V.; Glisson, Bonnie S.; Lu, Charles S.; Negrao, Marcelo V.; Skoulidis, Ferdinandos; Vokes, Natalie; Cardnell, Robert J.; Wistuba, Ignacio I.; Wang, Jing; Heymach, John V.; Byers, Lauren A. Share Save
An atlas of epithelial cell states and plasticity in lung adenocarcinoma Han, Guangchun; Sinjab, Ansam; Treekitkarnmongkol, Warapen; Rahal, Zahraa; Liu, Yuejiang; Serrano, Alejandra G.; Feng, Jiping; Liang, Ke; Khan, Khaja; Lu, Wei; Hernandez, Sharia; Cao, Xuanye; Dai, Enyu; Liu, Yunhe; Pei, Guangsheng; Hu, Jian; Bolanos, Lorena I. Gomez; Parra, Edwin R.; Cascone, Tina; Sepesi, Boris; Moghaddam, Seyed Javad; Scheet, Paul; Negrao, Marcelo V.; Heymach, John V.; Li, Mingyao; Chen, Jichao; Dubinett, Steven M.; Fujimoto, Junya; Solis, Luisa M.; Wistuba, Ignacio I.; Stevenson, Christopher S.; Spira, Avrum; Wang, Linghua; Kadara, Humam Share Save
A circulating microRNA panel predicts recurrence and survival in early-stage lung adenocarcinoma Tai, Mei-Chee; Bantis, Leonidas E.; Parhy, Gargy; Kato, Taketo; Tanaka, Ichidai; Chow, Chi-Wan; Fujimoto, Junya; Behrens, Carmen; Hase, Tetsunari; Kawaguchi, Koji; Fahrmann, Johannes F.; Ostrin, Edwin; Yokoi, Kohei; Chen-Yoshikawa, Toyofumi F.; Hasegawa, Yoshinori; Hanash, Samir M.; Wistuba, Ignacio I.; Taguchi, Ayumu Share Save
Pan-cancer characterization of tumor-immune interactions using spatially resolved transcriptomics Pei, Guangsheng; Wu, Jingjing; Dai, Enyu; Liu, Yunhe; Han, Guangchun; Hu, Jian; Peng, Fuduan; Cho, Kyung S.; Jiang, Jiahui; Zhang, Daiwei; Sinjab, Ansam F.; Zhang, Boyu; Song, Shumei; Fujimoto, Junya; Soto, Luisa M. Solis; Maitra, Anirban; Ajani, Jaffer; Li, Mingyao; Kadara, Humam; Wang, Linghua Share Save
Spatial profiling of immune biomarkers in resected treatment-naive early stage lung adenocarcinoma Hernandez, Sharia D.; Lu, Wei; Serrano, Alejandra G.; Arrechedera, Claudio J.; Sanchez-Espiridion, Beatriz; Ozirmak, Nejla; Molina, Max; Kostousov, Larisa; Barnes, Sean; Khan, Khaja; Tang, Ximing; Fujimoto, Junya; Parra, Edwin R.; Raso, Gabriela; Schmidt, Stephanie T.; Behrens, Carmen; Heymach, John; Zhang, Jianjun; Chen, Ken; Sepesi, Boris; Cascone, Tina; Gibbons, Don; Wistuba, Ignacio I.; Haymaker, Cara; Solis, Luisa M. Share Save
Targeting IL-1B synergizes with PD-1 blockade for enhanced T and B cell immune responses and inhibition of early lung cancer development Treekitkarnmongkol, Warapen; Han, Guangchun; Rahal, Zahraa; Feng, Jiping; Sinjab, Ansam; Cascone, Tina; Stevenson, Christopher S.; Sweeney, Cheryl; Edwards, Matt; Spira, Avrum; Fujimoto, Junya; Moghaddam, Seyed Javad; Wang, Linghua; Kadara, Humam Share Save
Single-cell transcriptomic analysis reveals immune landscape in the malignant transformation of normal lung to lung adenocarcinoma in genetic murine models Chen, Hong; Zhu, Bo; Fujimoto, Junya; Tian, Yanhua; Li, Jian-Rong; Chen, Pingjun; Reuben, Alexandre; Nilsson, Monique B.; Le, Xiuning; Poteete, Alissa; Hubert, Shawna M.; Gibbons, Don L.; Wistuba, Ignacio I.; Wu, Jia; Cheng, Chao; Heymach, John V.; Zhang, Jianjun Share Save
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